Melissa Gymrek

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 27

Top Topics

Gene Expression

Advance Care Planning

Mild Cognitive Impairment

Top Venues

Bioinformatics (Oxford, England)

Nature communications

Nature genetics

This page only lists publications with an associated author ORCID identifier.

Publications

Aarushi Sehgal, Helyaneh Ziaei Jam, Andrew Shen, Melissa Gymrek
Genome-wide detection of somatic mosaicism at short tandem repeats. Bioinformatics (Oxford, England) 40 (8) (2024)
Michael Lamkin, Melissa Gymrek
The emerging role of tandem repeats in complex traits. Nature reviews. Genetics (2024)
Aarushi Sehgal, Helyaneh Ziaei Jam, Andrew Shen, Melissa Gymrek
Genome-wide detection of somatic mosaicism at short tandem repeats. Bioinformatics (Oxford, England) 40 (8) (2024)
Helyaneh Ziaei Jam, Justin M Zook, Sara Javadzadeh, Jonghun Park, Aarushi Sehgal, Melissa Gymrek
LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads. Genome biology 25 (1) (2024)
Helyaneh Ziaei Jam, Justin M Zook, Sara Javadzadeh, Jonghun Park, Aarushi Sehgal, Melissa Gymrek
LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads. Genome biology 25 (1) (2024)
Helyaneh Ziaei Jam, Justin M Zook, Sara Javadzadeh, Jonghun Park, Aarushi Sehgal, Melissa Gymrek
LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads. Genome biology 25 (1) (2024)
Michael Lamkin, Melissa Gymrek
The emerging role of tandem repeats in complex traits. Nature reviews. Genetics 25 (7) (2024)
Helyaneh Ziaei Jam, Justin M Zook, Sara Javadzadeh, Jonghun Park, Aarushi Sehgal, Melissa Gymrek
LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads. Genome biology 25 (1) (2024)
Aarushi Sehgal, Helyaneh Ziaei Jam, Andrew Shen, Melissa Gymrek
Genome-wide detection of somatic mosaicism at short tandem repeats. Bioinformatics (Oxford, England) 40 (8) (2024)
Arya R Massarat, Melissa Gymrek, Brian McStay, Hákon Jónsson
Human pangenome supports analysis of complex genomic regions. Nature 617 (7960) (2023)
An Zheng, Zeyang Shen, Christopher K Glass, Melissa Gymrek
Deep learning predicts the impact of regulatory variants on cell-type-specific enhancers in the brain. Bioinformatics advances 3 (1) (2023)
Mikhail O Maksimov, Cynthia Wu, David George Ashbrook, Flavia Villani, Vincenza Colonna, Nima Mousavi, Nichole Ma, Lu Lu, Jonathan K Pritchard, Alon Goren, Robert W Williams, Abraham A Palmer, Melissa Gymrek
A novel quantitative trait locus implicates Msh3 in the propensity for genome-wide short tandem repeat expansions in mice. Genome research (2023)
Arya R Massarat, Michael Lamkin, Ciara Reeve, Amy L Williams, Matteo D'Antonio, Melissa Gymrek
Haptools: a toolkit for admixture and haplotype analysis. Bioinformatics (Oxford, England) 39 (3) (2023)
An Zheng, Zeyang Shen, Christopher K Glass, Melissa Gymrek
Deep learning predicts the impact of regulatory variants on cell-type-specific enhancers in the brain. Bioinformatics advances 3 (1) (2023)
Arya R Massarat, Michael Lamkin, Ciara Reeve, Amy L Williams, Matteo D'Antonio, Melissa Gymrek
Haptools: a toolkit for admixture and haplotype analysis. Bioinformatics (Oxford, England) 39 (3) (2023)
Arya R Massarat, Michael Lamkin, Ciara Reeve, Amy L Williams, Matteo D'Antonio, Melissa Gymrek
Haptools: a toolkit for admixture and haplotype analysis. Bioinformatics (Oxford, England) 39 (3) (2023)
Helyaneh Ziaei Jam, Yang Li, Ross DeVito, Nima Mousavi, Nichole Ma, Ibra Lujumba, Yagoub Adam, Mikhail Maksimov, Bonnie B Huang, Egor Dolzhenko, Yunjiang Qiu, Fredrick Elishama Kakembo, Habi Joseph, Blessing Onyido, Jumoke Adeyemi, Mehrdad Bakhtiari, Jonghun Park, Sara Javadzadeh, Daudi Jjingo, Ezekiel Adebiyi, Vineet Bafna, Melissa Gymrek
A deep population reference panel of tandem repeat variation. Nature communications 14 (1) (2023)
Max A Verbiest, Mikhail O Maksimov, Ye Jin, Maria Anisimova, Melissa Gymrek, Tugce Bilgin Sonay
Mutation and selection processes regulating short tandem repeats give rise to genetic and phenotypic diversity across species. Journal of evolutionary biology (2022)
Mehrdad Bakhtiari, Jonghun Park, Yuan-Chun Ding, Sharona Shleizer-Burko, Susan L Neuhausen, Bjarni V Halldórsson, Kári Stefánsson, Melissa Gymrek, Vineet Bafna
Variable number tandem repeats mediate the expression of proximal genes. Nature communications 12 (1) (2021)
Nima Mousavi, Jonathan Margoliash, Neha Pusarla, Shubham Saini, Richard Yanicky, Melissa Gymrek
TRTools: a toolkit for genome-wide analysis of tandem repeats. Bioinformatics (Oxford, England) 37 (5) (2021)
Ileena Mitra, Bonnie B Huang, Nima Mousavi, Nichole Ma, Michael Lamkin, Richard Yanicky, Sharona Shleizer-Burko, Kirk E Lohmueller, Melissa Gymrek
Patterns of de novo tandem repeat mutations and their role in autism. Nature 589 (7841) (2021)
Marten A Hoeksema, Zeyang Shen, Inge R Holtman, An Zheng, Nathanael J Spann, Isidoro Cobo, Melissa Gymrek, Christopher K Glass
Mechanisms underlying divergent responses of genetically distinct macrophages to IL-4. Science advances 7 (25) (2021)
Julian Musa, Florencia Cidre-Aranaz, Marie-Ming Aynaud, Martin F Orth, Maximilian Martin Ludwig Knott, Olivier Mirabeau, Gal Mazor, Mor Varon, Tilman L B Hölting, Sandrine Grossetête, Moritz Gartlgruber, Didier Surdez, Julia S Gerke, Shunya Ohmura, Aruna Marchetto, Marlene Dallmayer, Michaela C Baldauf, Stefanie Stein, Giuseppina Sannino, Jing Li, Laura Romero-Pérez, Frank Westermann, Wolfgang Hartmann, Uta Dirksen, Melissa Gymrek, Nathaniel D Anderson, Adam Shlien, Barak Rotblat, Thomas Kirchner, Olivier Delattre, Thomas G P Grünewald
Cooperation of cancer drivers with regulatory germline variants shapes clinical outcomes. Nature communications 10 (1) (2019)
Stephanie Feupe Fotsing, Jonathan Margoliash, Catherine Wang, Shubham Saini, Richard Yanicky, Sharona Shleizer-Burko, Alon Goren, Melissa Gymrek
The impact of short tandem repeat variation on gene expression. Nature genetics 51 (11) (2019)
Shubham Saini, Ileena Mitra, Nima Mousavi, Stephanie Feupe Fotsing, Melissa Gymrek
A reference haplotype panel for genome-wide imputation of short tandem repeats. Nature communications 9 (1) (2018)
Joanna Kaplanis, Assaf Gordon, Tal Shor, Omer Weissbrod, Dan Geiger, Mary Wahl, Michael Gershovits, Barak Markus, Mona Sheikh, Melissa Gymrek, Gaurav Bhatia, Daniel G MacArthur, Alkes L Price, Yaniv Erlich
Quantitative analysis of population-scale family trees with millions of relatives. Science (New York, N.Y.) 360 (6385) (2018)
Melissa Gymrek, Thomas Willems, David Reich, Yaniv Erlich
Interpreting short tandem repeat variations in humans using mutational constraint. Nature genetics 49 (10) (2017)