Kirk E Lohmueller

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 42

Top Venues

Molecular biology and evolution

bioRxiv : the preprint server for biology

PLoS genetics

Genome biology and evolution

University of California Los Angeles

Cornell University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California Los Angeles

United States

Assistant Professor :: Ecology and Evolutionary Biology

Education History

Cornell University

United States

PHD :: Genetics & Development

Publications

Aina Martinez I Zurita, Christopher C Kyriazis, Kirk E Lohmueller
The impact of non-neutral synonymous mutations when inferring selection on non-synonymous mutations. bioRxiv : the preprint server for biology (2024)
Christopher C Kyriazis, Kirk E Lohmueller
Constraining models of dominance for nonsynonymous mutations in the human genome. bioRxiv : the preprint server for biology (2024)
Aina Martinez I Zurita, Christopher C Kyriazis, Kirk E Lohmueller
The impact of non-neutral synonymous mutations when inferring selection on non-synonymous mutations. bioRxiv : the preprint server for biology (2024)
Christopher C Kyriazis, Kirk E Lohmueller
Constraining models of dominance for nonsynonymous mutations in the human genome. bioRxiv : the preprint server for biology (2024)
Chenlu Di, Kirk E Lohmueller
Revisiting Dominance in Population Genetics. Genome biology and evolution 16 (8) (2024)
Christopher C Kyriazis, Kirk E Lohmueller
Constraining models of dominance for nonsynonymous mutations in the human genome. PLoS genetics 20 (9) (2024)
Chenlu Di, Kirk E Lohmueller
Revisiting Dominance in Population Genetics. Genome biology and evolution 16 (8) (2024)
Chenlu Di, Kirk E Lohmueller
Revisiting Dominance in Population Genetics. Genome biology and evolution 16 (8) (2024)
Aina Martinez I Zurita, Christopher C Kyriazis, Kirk E Lohmueller
The impact of non-neutral synonymous mutations when inferring selection on non-synonymous mutations. bioRxiv : the preprint server for biology (2024)
Christopher C Kyriazis, Kirk E Lohmueller
Constraining models of dominance for nonsynonymous mutations in the human genome. bioRxiv : the preprint server for biology (2024)
Xinjun Zhang, Bernard Y Kim, Armaan Singh, Sriram Sankararaman, Arun Durvasula, Kirk E Lohmueller
MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations. Molecular biology and evolution 40 (1) (2023)
Christopher C Kyriazis, Annabel C Beichman, Kristin E Brzeski, Sarah R Hoy, Rolf O Peterson, John A Vucetich, Leah M Vucetich, Kirk E Lohmueller, Robert K Wayne
Genomic underpinnings of population persistence in Isle Royale moose. Molecular biology and evolution (2023)
Xinjun Zhang, Bernard Y Kim, Armaan Singh, Sriram Sankararaman, Arun Durvasula, Kirk E Lohmueller
MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations. Molecular biology and evolution 40 (1) (2023)
Gustavo Valadares Barroso, Kirk E Lohmueller
Inferring the mode and strength of ongoing selection. Genome research (2023)
Christopher C Kyriazis, Jacqueline A Robinson, Sergio F Nigenda-Morales, Annabel C Beichman, Lorenzo Rojas-Bracho, Kelly M Roberston, Michaël C Fontaine, Robert K Wayne, Barbara L Taylor, Kirk E Lohmueller, Phillip A Morin
Models based on best-available information support a low inbreeding load and potential for recovery in the vaquita. Heredity (2023)
Christopher C Kyriazis, Annabel C Beichman, Kristin E Brzeski, Sarah R Hoy, Rolf O Peterson, John A Vucetich, Leah M Vucetich, Kirk E Lohmueller, Robert K Wayne
Genomic Underpinnings of Population Persistence in Isle Royale Moose. Molecular biology and evolution 40 (2) (2023)
Xinjun Zhang, Bernard Y Kim, Armaan Singh, Sriram Sankararaman, Arun Durvasula, Kirk E Lohmueller
MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations. Molecular biology and evolution 40 (1) (2023)
Xinjun Zhang, Bernard Y Kim, Armaan Singh, Sriram Sankararaman, Arun Durvasula, Kirk E Lohmueller
MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations. Molecular biology and evolution 40 (1) (2023)
Jonathan C Mah, Kirk E Lohmueller, Nandita R Garud
Inference of the demographic histories and selective effects of human gut commensal microbiota over the course of human history. bioRxiv : the preprint server for biology (2023)
Christopher C Kyriazis, Annabel C Beichman, Kristin E Brzeski, Sarah R Hoy, Rolf O Peterson, John A Vucetich, Leah M Vucetich, Kirk E Lohmueller, Robert K Wayne
Genomic Underpinnings of Population Persistence in Isle Royale Moose. Molecular biology and evolution 40 (2) (2023)
Christopher C Kyriazis, Annabel C Beichman, Kristin E Brzeski, Sarah R Hoy, Rolf O Peterson, John A Vucetich, Leah M Vucetich, Kirk E Lohmueller, Robert K Wayne
Genomic Underpinnings of Population Persistence in Isle Royale Moose. Molecular biology and evolution 40 (2) (2023)
Emma E Wade, Christopher C Kyriazis, Maria Izabel A Cavassim, Kirk E Lohmueller
Quantifying the fraction of new mutations that are recessive lethal. Evolution; international journal of organic evolution (2023)
Jennifer A Leonard, Bridgett M vonHoldt, Thomas B Smith, Victoria L Sork, Beth Shapiro, Elaine A Ostrander, Loren H Rieseberg, Blaire Van Valkenburgh, Kirk E Lohmueller
Remembering distinguished professor Robert K. Wayne. Molecular ecology (2023)
Xinjun Zhang, Bernard Y Kim, Armaan Singh, Sriram Sankararaman, Arun Durvasula, Kirk E Lohmueller
MaLAdapt reveals novel targets of adaptive introgression from Neanderthals and Denisovans in worldwide human populations. Molecular biology and evolution (2023)
Jacqueline A Robinson, Christopher C Kyriazis, Sergio F Nigenda-Morales, Annabel C Beichman, Lorenzo Rojas-Bracho, Kelly M Roberston, Michaël C Fontaine, Robert K Wayne, Kirk E Lohmueller, Barbara L Taylor, Phillip A Morin
The critically endangered vaquita is not doomed to extinction by inbreeding depression. Science (New York, N.Y.) 376 (6593) (2022)
Victoria L Sork, Shawn J Cokus, Sorel T Fitz-Gibbon, Aleksey V Zimin, Daniela Puiu, Jesse A Garcia, Paul F Gugger, Claudia L Henriquez, Ying Zhen, Kirk E Lohmueller, Matteo Pellegrini, Steven L Salzberg
High-quality genome and methylomes illustrate features underlying evolutionary success of oaks. Nature communications 13 (1) (2022)
Annabel C Beichman, Pooneh Kalhori, Christopher C Kyriazis, Amber A DeVries, Sergio F Nigenda-Morales, Gisela Heckel, Yolanda Schramm, Andrés Moreno-Estrada, Douglas J Kennett, Mark Hylkema, James Bodkin, Klaus-Peter Koepfli, Kirk E Lohmueller, Robert K Wayne
Genomic analyses reveal range-wide devastation of sea otter populations. Molecular ecology (2021)
Anthony S Findley, Xinjun Zhang, Carly Boye, Yen Lung Lin, Cynthia A Kalita, Luis B Barreiro, Kirk E Lohmueller, Roger Pique-Regi, Francesca Luca
A signature of Neanderthal introgression on molecular mechanisms of environmental responses. PLoS genetics 17 (9) (2021)
Jazlyn A Mooney, Abigail Yohannes, Kirk E Lohmueller
The impact of identity by descent on fitness and disease in dogs. Proceedings of the National Academy of Sciences of the United States of America 118 (16) (2021)
Ileena Mitra, Bonnie B Huang, Nima Mousavi, Nichole Ma, Michael Lamkin, Richard Yanicky, Sharona Shleizer-Burko, Kirk E Lohmueller, Melissa Gymrek
Patterns of de novo tandem repeat mutations and their role in autism. Nature 589 (7841) (2021)
Jesse A Garcia, Kirk E Lohmueller
Negative linkage disequilibrium between amino acid changing variants reveals interference among deleterious mutations in the human genome. PLoS genetics 17 (7) (2021)
Jeffrey R Adrion, Christopher B Cole, Noah Dukler, Jared G Galloway, Ariella L Gladstein, Graham Gower, Christopher C Kyriazis, Aaron P Ragsdale, Georgia Tsambos, Franz Baumdicker, Jedidiah Carlson, Reed A Cartwright, Arun Durvasula, Zehavit Leibovich, Bernard Y Kim, Patrick McKenzie, Philipp W Messer, Ekaterina Noskova, Diego Ortega-Del Vecchyo, Fernando Racimo, Travis J Struck, Simon Gravel, Ryan N Gutenkunst, Kirk E Lohmueller, Peter L Ralph, Daniel R Schrider, Adam C Siepel, Jerome Kelleher, Andrew D Kern
A community-maintained standard library of population genetic models. eLife 9 (2020)
Olivera Grujic, Tanya N Phung, Soo Bin Kwon, Adriana Arneson, Yuju Lee, Kirk E Lohmueller, Jason Ernst
Identification and characterization of constrained non-exonic bases lacking predictive epigenomic and transcription factor binding annotations. Nature communications 11 (1) (2020)
Christian D Huber, Bernard Y Kim, Kirk E Lohmueller
Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution. PLoS genetics 16 (5) (2020)
Xinjun Zhang, Bernard Y Kim, Kirk E Lohmueller, Emilia Huerta-Sánchez
The Impact of Recessive Deleterious Variation on Signals of Adaptive Introgression in Human Populations. Genetics 215 (3) (2020)
Ying Zhen, Christian D Huber, Robert W Davies, Kirk E Lohmueller
Greater strength of selection and higher proportion of beneficial amino acid changing mutations in humans compared with mice and Drosophila melanogaster. Genome research 31 (1) (2020)
Christopher C Kyriazis, Robert K Wayne, Kirk E Lohmueller
Strongly deleterious mutations are a primary determinant of extinction risk due to inbreeding depression. Evolution letters 5 (1) (2020)
Jacqueline A Robinson, Jannikke Räikkönen, Leah M Vucetich, John A Vucetich, Rolf O Peterson, Kirk E Lohmueller, Robert K Wayne
Genomic signatures of extensive inbreeding in Isle Royale wolves, a population on the threshold of extinction. Science advances 5 (5) (2019)
Shayna A Sura, Lauren L Smith, Monique R Ambrose, Carlos Eduardo G Amorim, Annabel C Beichman, Ana C R Gomez, Mark Juhn, Gaurav S Kandlikar, Julie S Miller, Jazlyn A Mooney, Riley O Mummah, Kirk E Lohmueller, James O Lloyd-Smith
Ten simple rules for giving an effective academic job talk. PLoS computational biology 15 (7) (2019)
Bernard Y Kim, Christian D Huber, Kirk E Lohmueller
Deleterious variation shapes the genomic landscape of introgression. PLoS genetics 14 (10) (2018)
Bernard Y Kim, Xinzeng Wei, Sorel Fitz-Gibbon, Kirk E Lohmueller, Joaquín Ortego, Paul F Gugger, Victoria L Sork
RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus: Fagaceae). Molecular ecology 27 (22) (2018)
Annabel C Beichman, Tanya N Phung, Kirk E Lohmueller
Comparison of Single Genome and Allele Frequency Data Reveals Discordant Demographic Histories. G3 (Bethesda, Md.) 7 (11) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Kirk E Lohmueller