Egor Dolzhenko

ORCID

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 23

Top Venues

Nature biotechnology

Nature genetics

Nature reviews. Genetics

Genome medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Adam C English, Egor Dolzhenko, Helyaneh Ziaei Jam, Sean K McKenzie, Nathan D Olson, Wouter De Coster, Jonghun Park, Bida Gu, Justin Wagner, Michael A Eberle, Melissa Gymrek, Mark J P Chaisson, Justin M Zook, Fritz J Sedlazeck
Analysis and benchmarking of small and large genomic variants across tandem repeats. Nature biotechnology (2024)
Indhu Shree Rajan Babu, Egor Dolzhenko, Michael A Eberle, Jan M Friedman
Sequence composition changes in short tandem repeats: heterogeneity, detection, mechanisms and clinical implications. Nature reviews. Genetics 25 (7) (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics 56 (7) (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics 56 (7) (2024)
Indhu Shree Rajan Babu, Egor Dolzhenko, Michael A Eberle, Jan M Friedman
Sequence composition changes in short tandem repeats: heterogeneity, detection, mechanisms and clinical implications. Nature reviews. Genetics 25 (7) (2024)
Adam C English, Egor Dolzhenko, Helyaneh Ziaei Jam, Sean K McKenzie, Nathan D Olson, Wouter De Coster, Jonghun Park, Bida Gu, Justin Wagner, Michael A Eberle, Melissa Gymrek, Mark J P Chaisson, Justin M Zook, Fritz J Sedlazeck
Analysis and benchmarking of small and large genomic variants across tandem repeats. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Indhu Shree Rajan Babu, Egor Dolzhenko, Michael A Eberle, Jan M Friedman
Sequence composition changes in short tandem repeats: heterogeneity, detection, mechanisms and clinical implications. Nature reviews. Genetics (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics (2024)
Laurel Hiatt, Ben Weisburd, Egor Dolzhenko, Grace E VanNoy, Nehir Edibe Kurtas, Michael J Bamshad, Aaron R Quinlan, Harriet Dashnow
STRchive: a dynamic resource detailing population-level and locus-specific insights at tandem repeat disease loci. medRxiv : the preprint server for health sciences (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics 56 (7) (2024)
Egor Dolzhenko, Adam English, Harriet Dashnow, Guilherme De Sena Brandine, Tom Mokveld, William J Rowell, Caitlin Karniski, Zev Kronenberg, Matt C Danzi, Warren A Cheung, Chengpeng Bi, Emily Farrow, Aaron Wenger, Khi Pin Chua, Verónica Martínez-Cerdeño, Trevor D Bartley, Peng Jin, David L Nelson, Stephan Zuchner, Tomi Pastinen, Aaron R Quinlan, Fritz J Sedlazeck, Michael A Eberle
Characterization and visualization of tandem repeats at genome scale. Nature biotechnology (2024)
Adam C English, Egor Dolzhenko, Helyaneh Ziaei Jam, Sean K McKenzie, Nathan D Olson, Wouter De Coster, Jonghun Park, Bida Gu, Justin Wagner, Michael A Eberle, Melissa Gymrek, Mark J P Chaisson, Justin M Zook, Fritz J Sedlazeck
Benchmarking of small and large variants across tandem repeats. bioRxiv : the preprint server for biology (2023)
Helyaneh Ziaei Jam, Yang Li, Ross DeVito, Nima Mousavi, Nichole Ma, Ibra Lujumba, Yagoub Adam, Mikhail Maksimov, Bonnie B Huang, Egor Dolzhenko, Yunjiang Qiu, Fredrick Elishama Kakembo, Habi Joseph, Blessing Onyido, Jumoke Adeyemi, Mehrdad Bakhtiari, Jonghun Park, Sara Javadzadeh, Daudi Jjingo, Ezekiel Adebiyi, Vineet Bafna, Melissa Gymrek
A deep population reference panel of tandem repeat variation. Nature communications 14 (1) (2023)
Egor Dolzhenko, Ben Weisburd, Kristina Ibañez, Indhu-Shree Rajan-Babu, Christine Anyansi, Mark F Bennett, Kimberley Billingsley, Ashley Carroll, Samuel Clamons, Matt C Danzi, Viraj Deshpande, Jinhui Ding, Sarah Fazal, Andreas Halman, Bharati Jadhav, Yunjiang Qiu, Phillip A Richmond, Christopher T Saunders, Konrad Scheffler, Joke J F A van Vugt, Ramona R A J Zwamborn, null null, Samuel S Chong, Jan M Friedman, Arianna Tucci, Heidi L Rehm, Michael A Eberle
REViewer: haplotype-resolved visualization of read alignments in and around tandem repeats. Genome medicine 14 (1) (2022)
Andreas Halman, Egor Dolzhenko, Alicia Oshlack
STRipy: A graphical application for enhanced genotyping of pathogenic short tandem repeats in sequencing data. Human mutation 43 (7) (2022)

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Publication Activity (10 Years)

Top Topics

Top Venues

Egor Dolzhenko