Michael J Harms (Zachary R Sailer, Mike Harms)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 43

Top Venues

Protein science : a publication of the Protein Society

bioRxiv : the preprint server for biology

Proceedings of the National Academy of Sciences of the United States of America

eLife

University of Oregon

Johns Hopkins University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Oregon Sep 01 2013

United States

Assistant Professor :: Chemistry and Biochemistry

Education History

Johns Hopkins University

United States

PHD :: Biophysics

Oregon State University Sep 01 2000

United States

BSC :: Biochemistry and Biophysics

Publications

Lauren O Chisholm, Natalie M Jaeger, Hannah E Murawsky, Michael J Harms
S100A9 interacts with a dynamic region on CD14 to activate Toll-like receptor 4. bioRxiv : the preprint server for biology (2024)
Siena J Glenn, Zealon Gentry-Lear, Michael Shavlik, Michael J Harms, Thomas J Asaki, Arden Perkins
Bacterial vampirism mediated through taxis to serum. eLife 12 (2024)
Charlotte Nixon, Shion A Lim, Matt Sternke, Doug Barrick, Michael J Harms, Susan Marqusee
The importance of input sequence set to consensus-derived proteins and their relationship to reconstructed ancestral proteins. Protein science : a publication of the Protein Society 33 (6) (2024)
Charlotte Nixon, Shion A Lim, Matt Sternke, Doug Barrick, Michael J Harms, Susan Marqusee
The importance of input sequence set to consensus-derived proteins and their relationship to reconstructed ancestral proteins. Protein science : a publication of the Protein Society 33 (6) (2024)
Lauren O Chisholm, Chae Kyung Jeon, James S Prell, Michael J Harms
Changing expression system alters oligomerization and proinflammatory activity of recombinant human S100A9. bioRxiv : the preprint server for biology (2024)
Zealon Gentry-Lear, Kailie Franco, Michael Shavlik, Michael J Harms, Arden Perkins
Navigating contradictions: Salmonella Typhimurium chemotactic responses to conflicting chemoeffector signals show parity with bacterial growth benefits. bioRxiv : the preprint server for biology (2024)
Siena J Glenn, Zealon Gentry-Lear, Michael Shavlik, Michael J Harms, Thomas J Asaki, Arden Perkins
Bacterial vampirism mediated through taxis to serum. eLife 12 (2024)
Charlotte Nixon, Shion A Lim, Matt Sternke, Doug Barrick, Michael J Harms, Susan Marqusee
The importance of input sequence set to consensus-derived proteins and their relationship to reconstructed ancestral proteins. Protein science : a publication of the Protein Society 33 (6) (2024)
Lauren O Chisholm, Chae Kyung Jeon, James S Prell, Michael J Harms
Changing expression system alters oligomerization and proinflammatory activity of recombinant human S100A9. bioRxiv : the preprint server for biology (2024)
Siena J Glenn, Zealon Gentry-Lear, Michael Shavlik, Michael J Harms, Thomas J Asaki, Arden Perkins
Bacterial vampirism mediated through taxis to serum. eLife 12 (2024)
Kona N Orlandi, Michael J Harms
Zebrafish do not have calprotectin. bioRxiv : the preprint server for biology (2024)
Zealon Gentry-Lear, Kailie Franco, Michael Shavlik, Michael J Harms, Arden Perkins
Navigating contradictions: Salmonella Typhimurium chemotactic responses to conflicting chemoeffector signals show parity with bacterial growth benefits. bioRxiv : the preprint server for biology (2024)
Lauren O Chisholm, Chae Kyung Jeon, James S Prell, Michael J Harms
Changing expression system alters oligomerization and proinflammatory activity of recombinant human S100A9. bioRxiv : the preprint server for biology (2024)
Charlotte Nixon, Shion A Lim, Matt Sternke, Doug Barrick, Michael J Harms, Susan Marqusee
The importance of input sequence set to consensus-derived proteins and their relationship to reconstructed ancestral proteins. Protein science : a publication of the Protein Society 33 (6) (2024)
Siena J Glenn, Zealon Gentry-Lear, Michael Shavlik, Michael J Harms, Thomas J Asaki, Arden Baylink
Bacterial vampirism mediated through chemotaxis. bioRxiv : the preprint server for biology (2023)
Charlotte F Nixon, Shion A Lim, Matt Sternke, Doug Barrick, Michael J Harms, Susan Marqusee
The importance of input sequence set to consensus-derived proteins and their relationship to reconstructed ancestral proteins. bioRxiv : the preprint server for biology (2023)
Kona N Orlandi, Sophia R Phillips, Zachary R Sailer, Joseph L Harman, Michael J Harms
Topiary: Pruning the manual labor from ancestral sequence reconstruction. Protein science : a publication of the Protein Society 32 (2) (2023)
Orion G B Banks, Michael J Harms, Jeffrey N McKnight, Laura E McKnight
Simultaneous Mapping of DNA Binding and Nucleosome Positioning with SpLiT-ChEC. bioRxiv : the preprint server for biology (2023)
Kona N Orlandi, Sophia R Phillips, Zachary R Sailer, Joseph L Harman, Michael J Harms
Topiary: Pruning the manual labor from ancestral sequence reconstruction. Protein science : a publication of the Protein Society 32 (2) (2023)
Kona N Orlandi, Sophia R Phillips, Zachary R Sailer, Joseph L Harman, Michael J Harms
Topiary: Pruning the manual labor from ancestral sequence reconstruction. Protein science : a publication of the Protein Society 32 (2) (2023)
Kona N Orlandi, Sophia R Phillips, Zachary R Sailer, Joseph L Harman, Michael J Harms
Topiary: Pruning the manual labor from ancestral sequence reconstruction. Protein science : a publication of the Protein Society 32 (2) (2023)
Kona N Orlandi, Sophia R Phillips, Zachary R Sailer, Joseph L Harman, Michael J Harms
Topiary: pruning the manual labor from ancestral sequence reconstruction. Protein science : a publication of the Protein Society (2022)
Leonardo M Cortez, Anneliese J Morrison, Craig R Garen, Sawyer Patterson, Toshi Uyesugi, Rafayel Petrosyan, Rohith Vedhthaanth Sekar, Michael J Harms, Michael T Woodside, Valerie L Sim
Probing the origin of prion protein misfolding via reconstruction of ancestral proteins. Protein science : a publication of the Protein Society 31 (12) (2022)
Kona N Orlandi, Sophia R Phillips, Zachary R Sailer, Joseph L Harman, Michael J Harms
Topiary: pruning the manual labor from ancestral sequence reconstruction. Protein science : a publication of the Protein Society (2022)
Joseph L Harman, Patrick N Reardon, Shawn M Costello, Gus D Warren, Sophia R Phillips, Patrick J Connor, Susan Marqusee, Michael J Harms
Evolution avoids a pathological stabilizing interaction in the immune protein S100A9. Proceedings of the National Academy of Sciences of the United States of America 119 (41) (2022)
Anneliese J Morrison, Daria R Wonderlick, Michael J Harms
Ensemble epistasis: thermodynamic origins of nonadditivity between mutations. Genetics 219 (1) (2022)
Andrea N Loes, Melissa N Hinman, Dylan R Farnsworth, Adam C Miller, Karen Guillemin, Michael J Harms
Identification and Characterization of Zebrafish Tlr4 Coreceptor Md-2. Journal of immunology (Baltimore, Md. : 1950) 206 (5) (2021)
Charlotte F Nixon, Shion A Lim, Zachary R Sailer, Ivan N Zheludev, Christine L Gee, Brian A Kelch, Michael J Harms, Susan Marqusee
Exploring the Evolutionary History of Kinetic Stability in the α-Lytic Protease Family. Biochemistry 60 (3) (2021)
Rohit Jain, Khaja Muneeruddin, Jeremy Anderson, Michael J Harms, Scott A Shaffer, Charles R Matthews
A conserved folding nucleus sculpts the free energy landscape of bacterial and archaeal orthologs from a divergent TIM barrel family. Proceedings of the National Academy of Sciences of the United States of America 118 (17) (2021)
Lucas C Wheeler, Michael J Harms
Were Ancestral Proteins Less Specific? Molecular biology and evolution 38 (6) (2021)
Lucas C Wheeler, Arden Perkins, Caitlyn E Wong, Michael J Harms
Learning peptide recognition rules for a low-specificity protein. Protein science : a publication of the Protein Society 29 (11) (2020)
Joseph L Harman, Andrea N Loes, Gus D Warren, Maureen C Heaphy, Kirsten J Lampi, Michael J Harms
Evolution of multifunctionality through a pleiotropic substitution in the innate immune protein S100A9. eLife 9 (2020)
Zachary R Sailer, Sarah H Shafik, Robert L Summers, Alex Joule, Alice Patterson-Robert, Rowena E Martin, Michael J Harms
Inferring a complete genotype-phenotype map from a small number of measured phenotypes. PLoS computational biology 16 (9) (2020)
Michael J Harms
Enzymes emerge by upcycling. Nature chemical biology 14 (6) (2019)
Jeremy A Anderson, Andrea N Loes, Grace L Waddell, Michael J Harms
Tracing the evolution of novel features of human Toll-like receptor 4. Protein science : a publication of the Protein Society 28 (7) (2019)
Hiranmayi Duvvuri, Lucas C Wheeler, Michael J Harms
pytc: Open-Source Python Software for Global Analyses of Isothermal Titration Calorimetry Data. Biochemistry 57 (18) (2018)
Lucas C Wheeler, Michael J Harms
Human S100A5 binds Ca2+ and Cu2+ independently. BMC biophysics 10 (2017)
Michael J Harms, Michael J Harms
Detecting High-Order Epistasis in Nonlinear Genotype-Phenotype Maps. Genetics 205 (3) (2017)
Zachary R Sailer, Michael J Harms
High-order epistasis shapes evolutionary trajectories. PLoS computational biology 13 (5) (2017)
Zachary R Sailer, Michael J Harms
Molecular ensembles make evolution unpredictable. Proceedings of the National Academy of Sciences of the United States of America 114 (45) (2017)
Lucas C Wheeler, Jeremy A Anderson, Anneliese J Morrison, Caitlyn E Wong, Michael J Harms
Conservation of Specificity in Two Low-Specificity Proteins. Biochemistry 57 (5) (2017)
Shion A Lim, Kathryn M Hart, Michael J Harms, Susan Marqusee
Evolutionary trend toward kinetic stability in the folding trajectory of RNases H. Proceedings of the National Academy of Sciences of the United States of America 113 (46) (2016)
Lucas C Wheeler, Micah T Donor, James S Prell, Michael J Harms
Multiple Evolutionary Origins of Ubiquitous Cu2+ and Zn2+ Binding in the S100 Protein Family. PloS one 11 (10) (2016)

Michael J Harms.css-eqlu8i{font-size:small;padding-left:4px;} (Zachary R Sailer, Mike Harms)

Publication Activity (10 Years)

Top Topics

Top Venues

Michael J Harms (Zachary R Sailer, Mike Harms)