Michael Shaffer

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 7

Top Topics

Gene Expression

Listeria Monocytogenes

Men Who Have Sex With Men

Top Venues

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Ikaia Leleiwi, Katherine Kokkinias, Yongseok Kim, Maryam Baniasad, Michael Shaffer, Anice Sabag-Daigle, Rebecca A Daly, Rory M Flynn, Vicki H Wysocki, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Gut microbiome carbon and sulfur metabolisms support Salmonella during pathogen infection. bioRxiv : the preprint server for biology (2024)
Katherine Kokkinias, Anice Sabag-Daigle, Yongseok Kim, Ikaia Leleiwi, Michael Shaffer, Richard Kevorkian, Rebecca A Daly, Vicki H Wysocki, Mikayla A Borton, Brian M M Ahmer, Kelly C Wrighton
Time resolved multi-omics reveals diverse metabolic strategies of Salmonella during diet-induced inflammation. bioRxiv : the preprint server for biology (2024)
Ikaia Leleiwi, Josué A Rodríguez-Ramos, Michael Shaffer, Anice Sabag-Daigle, Katherine Kokkinias, Rory M Flynn, Rebecca A Daly, Linnea F M Kop, Lindsey M Solden, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Exposing new taxonomic variation with inflammation - a murine model-specific genome database for gut microbiome researchers. Microbiome 11 (1) (2023)
Ikaia Leleiwi, Josué A Rodríguez-Ramos, Michael Shaffer, Anice Sabag-Daigle, Katherine Kokkinias, Rory M Flynn, Rebecca A Daly, Linnea F M Kop, Lindsey M Solden, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Exposing new taxonomic variation with inflammation - a murine model-specific genome database for gut microbiome researchers. Microbiome 11 (1) (2023)
Ikaia Leleiwi, Josué A Rodríguez-Ramos, Michael Shaffer, Anice Sabag-Daigle, Katherine Kokkinias, Rory M Flynn, Rebecca A Daly, Linnea F M Kop, Lindsey M Solden, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Exposing new taxonomic variation with inflammation - a murine model-specific genome database for gut microbiome researchers. Microbiome 11 (1) (2023)
Josué A Rodríguez-Ramos, Mikayla A Borton, Bridget B McGivern, Garrett J Smith, Lindsey M Solden, Michael Shaffer, Rebecca A Daly, Samuel Owen Purvine, Carrie D Nicora, Elizabeth K Eder, Mary S Lipton, David W Hoyt, James C Stegen, Kelly C Wrighton
Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments. mSystems 7 (4) (2022)
Sam X Li, Sharon Sen, Jennifer M Schneider, Ka-Na Xiong, Nichole M Nusbacher, Nancy Moreno-Huizar, Michael Shaffer, Abigail J S Armstrong, Erin Severs, Kristine A Kuhn, Charles P Neff, Martin D McCarter, Thomas Campbell, Catherine A Lozupone, Brent E Palmer
Gut microbiota from high-risk men who have sex with men drive immune activation in gnotobiotic mice and in vitro HIV infection. PLoS pathogens 15 (4) (2019)