Rebecca A Daly

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 15

Top Topics

Polycyclic Aromatic Hydrocarbons

Listeria Monocytogenes

Top Venues

Microbiology resource announcements

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Ikaia Leleiwi, Katherine Kokkinias, Yongseok Kim, Maryam Baniasad, Michael Shaffer, Anice Sabag-Daigle, Rebecca A Daly, Rory M Flynn, Vicki H Wysocki, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Gut microbiome carbon and sulfur metabolisms support Salmonella during pathogen infection. bioRxiv : the preprint server for biology (2024)
Katherine Kokkinias, Anice Sabag-Daigle, Yongseok Kim, Ikaia Leleiwi, Michael Shaffer, Richard Kevorkian, Rebecca A Daly, Vicki H Wysocki, Mikayla A Borton, Brian M M Ahmer, Kelly C Wrighton
Time resolved multi-omics reveals diverse metabolic strategies of Salmonella during diet-induced inflammation. bioRxiv : the preprint server for biology (2024)
Paul O'Toole, Rebecca A Daly, Reza Keshavarz Afshar, Michael Shaffer, Kelly C Wrighton, Bridget B McGivern
Draft Metagenome-Assembled Genome Sequence of a Novel Citricoccus Species from Agricultural Soil in Western Colorado. Microbiology resource announcements 12 (1) (2023)
Daniel A Schwartz, Josué A Rodríguez-Ramos, Michael Shaffer, Rory M Flynn, Rebecca A Daly, Kelly C Wrighton, Jay T Lennon
Human-Gut Phages Harbor Sporulation Genes. mBio (2023)
Ikaia Leleiwi, Josué A Rodríguez-Ramos, Michael Shaffer, Anice Sabag-Daigle, Katherine Kokkinias, Rory M Flynn, Rebecca A Daly, Linnea F M Kop, Lindsey M Solden, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Exposing new taxonomic variation with inflammation - a murine model-specific genome database for gut microbiome researchers. Microbiome 11 (1) (2023)
Paul O'Toole, Rebecca A Daly, Reza Keshavarz Afshar, Michael Shaffer, Kelly C Wrighton, Bridget B McGivern
Draft Metagenome-Assembled Genome Sequence of a Novel Citricoccus Species from Agricultural Soil in Western Colorado. Microbiology resource announcements (2023)
Paul O'Toole, Rebecca A Daly, Reza Keshavarz Afshar, Michael Shaffer, Kelly C Wrighton, Bridget B McGivern
Draft Metagenome-Assembled Genome Sequence of a Novel Citricoccus Species from Agricultural Soil in Western Colorado. Microbiology resource announcements 12 (1) (2023)
Paul O'Toole, Rebecca A Daly, Reza Keshavarz Afshar, Michael Shaffer, Kelly C Wrighton, Bridget B McGivern
Draft Metagenome-Assembled Genome Sequence of a Novel Citricoccus Species from Agricultural Soil in Western Colorado. Microbiology resource announcements 12 (1) (2023)
Ikaia Leleiwi, Josué A Rodríguez-Ramos, Michael Shaffer, Anice Sabag-Daigle, Katherine Kokkinias, Rory M Flynn, Rebecca A Daly, Linnea F M Kop, Lindsey M Solden, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Exposing new taxonomic variation with inflammation - a murine model-specific genome database for gut microbiome researchers. Microbiome 11 (1) (2023)
Ikaia Leleiwi, Josué A Rodríguez-Ramos, Michael Shaffer, Anice Sabag-Daigle, Katherine Kokkinias, Rory M Flynn, Rebecca A Daly, Linnea F M Kop, Lindsey M Solden, Brian M M Ahmer, Mikayla A Borton, Kelly C Wrighton
Exposing new taxonomic variation with inflammation - a murine model-specific genome database for gut microbiome researchers. Microbiome 11 (1) (2023)
Mikayla A Borton, Bridget B McGivern, Kathryn R Willi, Benjamin J Woodcroft, Annika C Mosier, Ted Bambakidis, Derick M Singleton, Filipe Liu, Janaka N Edirisinghe, José P Faria, Ikaia Leleiwi, Rebecca A Daly, Amy E Goldman, Michael J Wilkins, Ed K Hall, Christa Pennacchio, Simon Roux, Emiley A Eloe-Fadrosh, Matthew B Sullivan, Christopher S Henry, Elisha M Wood-Charlson, Matthew R V Ross, Christopher S Miller, Byron C Crump, James C Stegen, Kelly C Wrighton
A functional microbiome catalog crowdsourced from North American rivers. bioRxiv : the preprint server for biology (2023)
Amelia R Nelson, Adrienne B Narrowe, Charles C Rhoades, Timothy S Fegel, Rebecca A Daly, Holly K Roth, Rosalie K Chu, Kaela K Amundson, Robert B Young, Andrei Stecca Steindorff, Stephen J Mondo, Igor V Grigoriev, Asaf Salamov, Thomas Borch, Michael J Wilkins
Wildfire-dependent changes in soil microbiome diversity and function. Nature microbiology 7 (9) (2022)
Valerie A Seitz, Bridget B McGivern, Rebecca A Daly, Jacqueline M Chaparro, Mikayla A Borton, Amy M Sheflin, Stephen Kresovich, Lindsay Shields, Meagan E Schipanski, Kelly C Wrighton, Jessica E Prenni
Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function. Applied and environmental microbiology 88 (11) (2022)
Josué A Rodríguez-Ramos, Mikayla A Borton, Bridget B McGivern, Garrett J Smith, Lindsey M Solden, Michael Shaffer, Rebecca A Daly, Samuel Owen Purvine, Carrie D Nicora, Elizabeth K Eder, Mary S Lipton, David W Hoyt, James C Stegen, Kelly C Wrighton
Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments. mSystems 7 (4) (2022)
Arsen Yerlan, Rebecca A Daly, Reza Keshavarz Afshar, Michael Shaffer, Kelly C Wrighton, Bridget B McGivern
Draft Metagenome-Assembled Genome Sequences of Three Novel Ammonia-Oxidizing Nitrososphaera Strains Recovered from Agricultural Soils in Western Colorado. Microbiology resource announcements 11 (9) (2022)