Ming Chen

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 34

Top Topics

Transcription Factor

Arabidopsis Thaliana

Top Venues

Nature communications

International journal of molecular sciences

Sensors (Basel, Switzerland)

This page only lists publications with an associated author ORCID identifier.

Publications

Shuyang Cai, Honghu Li, Ruxiu Tie, Wei Shan, Qian Luo, Shufen Wang, Cong Feng, Huiqiao Chen, Meng Zhang, Yulin Xu, Xia Li, Ming Chen, Jiahui Lu, Pengxu Qian, He Huang
Nlrc3 signaling is indispensable for hematopoietic stem cell emergence via Notch signaling in vertebrates. Nature communications 15 (1) (2024)
Yujie Chen, Yuriy L Orlov, Ming Chen
Deciphering the Molecular Mechanism of the Intermediate Secondary Growth and Internode Elongation of the Castor Bean ( Ricinus communis L.) by the Combined Analysis of the Transcriptome and Metabolome. International journal of molecular sciences 25 (2) (2024)
Shuyang Cai, Honghu Li, Ruxiu Tie, Wei Shan, Qian Luo, Shufen Wang, Cong Feng, Huiqiao Chen, Meng Zhang, Yulin Xu, Xia Li, Ming Chen, Jiahui Lu, Pengxu Qian, He Huang
Nlrc3 signaling is indispensable for hematopoietic stem cell emergence via Notch signaling in vertebrates. Nature communications 15 (1) (2024)
Yujie Chen, Yuriy L Orlov, Ming Chen
Deciphering the Molecular Mechanism of the Intermediate Secondary Growth and Internode Elongation of the Castor Bean ( Ricinus communis L.) by the Combined Analysis of the Transcriptome and Metabolome. International journal of molecular sciences 25 (2) (2024)
Shuyang Cai, Honghu Li, Ruxiu Tie, Wei Shan, Qian Luo, Shufen Wang, Cong Feng, Huiqiao Chen, Meng Zhang, Yulin Xu, Xia Li, Ming Chen, Jiahui Lu, Pengxu Qian, He Huang
Nlrc3 signaling is indispensable for hematopoietic stem cell emergence via Notch signaling in vertebrates. Nature communications 15 (1) (2024)
Yujie Chen, Yuriy L Orlov, Ming Chen
Deciphering the Molecular Mechanism of the Intermediate Secondary Growth and Internode Elongation of the Castor Bean ( Ricinus communis L.) by the Combined Analysis of the Transcriptome and Metabolome. International journal of molecular sciences 25 (2) (2024)
Yanyu Xiao, Jingjing Wang, Jiaqi Li, Peijing Zhang, Jingyu Li, Yincong Zhou, Qing Zhou, Ming Chen, Xin Sheng, Zhihong Liu, Xiaoping Han, Guoji Guo
An analytical framework for decoding cell type-specific genetic variation of gene regulation. Nature communications 14 (1) (2023)
Yanyu Xiao, Jingjing Wang, Jiaqi Li, Peijing Zhang, Jingyu Li, Yincong Zhou, Qing Zhou, Ming Chen, Xin Sheng, Zhihong Liu, Xiaoping Han, Guoji Guo
An analytical framework for decoding cell type-specific genetic variation of gene regulation. Nature communications 14 (1) (2023)
Hongjun Chen, Yekai Zhou, Yongjing Liu, Peijing Zhang, Ming Chen
Network integration and protein structural binding analysis of neurodegeneration-related interactome. Briefings in bioinformatics (2023)
Yuriy L Orlov, Anastasia A Anashkina, Vadim V Kumeiko, Ming Chen, Nikolay A Kolchanov
Research Topics of the Bioinformatics of Gene Regulation. International journal of molecular sciences 24 (10) (2023)
Jingtian Xu, Can Zhu, Minzeng Su, Sida Li, Haoyu Chao, Ming Chen
CropGF: a comprehensive visual platform for crop gene family mining and analysis. Database : the journal of biological databases and curation 2023 (2023)
Haseeb Rehman Khan, Zeeshan Gillani, Muhammad Hasan Jamal, Atifa Athar, Muhammad Tayyab Chaudhry, Haoyu Chao, Yong He, Ming Chen
Early Identification of Crop Type for Smallholder Farming Systems Using Deep Learning on Time-Series Sentinel-2 Imagery. Sensors (Basel, Switzerland) 23 (4) (2023)
Yanyu Xiao, Jingjing Wang, Jiaqi Li, Peijing Zhang, Jingyu Li, Yincong Zhou, Qing Zhou, Ming Chen, Xin Sheng, Zhihong Liu, Xiaoping Han, Guoji Guo
An analytical framework for decoding cell type-specific genetic variation of gene regulation. Nature communications 14 (1) (2023)
Yuriy L Orlov, Ming Chen
Special Issue on "Plant Biology and Biotechnology: Focus on Genomics and Bioinformatics 2.0". International journal of molecular sciences 24 (24) (2023)
Haseeb Rehman Khan, Zeeshan Gillani, Muhammad Hasan Jamal, Atifa Athar, Muhammad Tayyab Chaudhry, Haoyu Chao, Yong He, Ming Chen
Early Identification of Crop Type for Smallholder Farming Systems Using Deep Learning on Time-Series Sentinel-2 Imagery. Sensors (Basel, Switzerland) 23 (4) (2023)
Yuriy L Orlov, Ming Chen
Special Issue on "Plant Biology and Biotechnology: Focus on Genomics and Bioinformatics 2.0". International journal of molecular sciences 24 (24) (2023)
Yongjing Liu, Cong Feng, Yincong Zhou, Xiaotian Shao, Ming Chen
Simulating the Dynamic Intra-Tumor Heterogeneity and Therapeutic Responses. Cancers 14 (7) (2022)
Obaid Ur Rehman, Muhammad Uzair, Haoyu Chao, Sajid Fiaz, Muhammad Ramzan Khan, Ming Chen
Role of the type-B authentic response regulator gene family in fragrant rice under alkaline salt stress. Physiologia plantarum 174 (3) (2022)
Yuhao Chen, Yanshi Hu, Xiaotian Hu, Cong Feng, Ming Chen
CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure. Bioinformatics (Oxford, England) 38 (18) (2022)
Bin Tan, Saige Xin, Yanshi Hu, Cong Feng, Ming Chen
LBD: a manually curated database of experimentally validated lymphoma biomarkers. Database : the journal of biological databases and curation 2022 (2022)
Yuan Liao, Lifeng Ma, Qile Guo, Weigao E, Xing Fang, Lei Yang, Fanwei Ruan, Jingjing Wang, Peijing Zhang, Zhongyi Sun, Haide Chen, Zhongliang Lin, Xueyi Wang, Xinru Wang, Huiyu Sun, Xiunan Fang, Yincong Zhou, Ming Chen, Wanhua Shen, Guoji Guo, Xiaoping Han
Cell landscape of larval and adult Xenopus laevis at single-cell resolution. Nature communications 13 (1) (2022)
Haoyu Chao, Yueming Hu, Liang Zhao, Saige Xin, Qingyang Ni, Peijing Zhang, Ming Chen
Biogenesis, Functions, Interactions, and Resources of Non-Coding RNAs in Plants. International journal of molecular sciences 23 (7) (2022)
Liang-Yu Fu, Tao Zhu, Xinkai Zhou, Ranran Yu, Zhaohui He, Peijing Zhang, Zhigui Wu, Ming Chen, Kerstin Kaufmann, Dijun Chen
ChIP-Hub provides an integrative platform for exploring plant regulome. Nature communications 13 (1) (2022)
Xinjian Yu, Yongjing Liu, Ming Chen
Reassessment of Reliability and Reproducibility for Triple-Negative Breast Cancer Subtyping. Cancers 14 (11) (2022)
Yuriy L Orlov, Vladimir A Ivanisenko, Oxana B Dobrovolskaya, Ming Chen
Plant Biology and Biotechnology: Focus on Genomics and Bioinformatics. International journal of molecular sciences 23 (12) (2022)
Yuan Liao, Lifeng Ma, Qile Guo, Weigao E, Xing Fang, Lei Yang, Fanwei Ruan, Jingjing Wang, Peijing Zhang, Zhongyi Sun, Haide Chen, Zhongliang Lin, Xueyi Wang, Xinru Wang, Huiyu Sun, Xiunan Fang, Yincong Zhou, Ming Chen, Wanhua Shen, Guoji Guo, Xiaoping Han
Publisher Correction: Cell landscape of larval and adult Xenopus laevis at single-cell resolution. Nature communications 13 (1) (2022)
Fang Ye, Guodong Zhang, Weigao E, Haide Chen, Chengxuan Yu, Lei Yang, Yuting Fu, Jiaqi Li, Sulei Fu, Zhongyi Sun, Lijiang Fei, Qile Guo, Jingjing Wang, Yanyu Xiao, Xinru Wang, Peijing Zhang, Lifeng Ma, Dapeng Ge, Suhong Xu, Juan Caballero Pérez, Alfredo Cruz-Ramírez, Yincong Zhou, Ming Chen, Ji-Feng Fei, Xiaoping Han, Guoji Guo
Construction of the axolotl cell landscape using combinatorial hybridization sequencing at single-cell resolution. Nature communications 13 (1) (2022)
Jiao Qu, Fa Yang, Tao Zhu, Yingshuo Wang, Wen Fang, Yan Ding, Xue Zhao, Xianjia Qi, Qiangmin Xie, Ming Chen, Qiang Xu, Yi-Cheng Xie, Yang Sun, Dijun Chen
A reference single-cell regulomic and transcriptomic map of cynomolgus monkeys. Nature communications 13 (1) (2022)
Hongjun Chen, Xiaotian Hu, Yanshi Hu, Jiawen Zhou, Ming Chen
CoVM 2 : Molecular Biological Data Integration of SARS-CoV-2 Proteins in a Macro-to-Micro Method. Biomolecules 12 (8) (2022)
Jingjing Wang, Yuriy L Orlov, Xue Li, Yincong Zhou, Yongjing Liu, Chunhui Yuan, Ming Chen
In situ dissecting the evolution of gene duplication with different histone modification patterns based on high-throughput data analysis in Arabidopsis thaliana. PeerJ 9 (2021)
Solomon Shiferaw Beyene, Tianyi Ling, Blagoj Ristevski, Ming Chen
A novel riboswitch classification based on imbalanced sequences achieved by machine learning. PLoS computational biology 16 (7) (2020)
Jingjing Wang, Qi Chen, Wenyi Wu, Yujie Chen, Yincong Zhou, Guoji Guo, Ming Chen
Genome-wide analysis of long non-coding RNAs responsive to multiple nutrient stresses in Arabidopsis thaliana. Functional & integrative genomics 21 (1) (2020)
Xianwen Meng, Peijing Zhang, Qi Chen, Jingjing Wang, Ming Chen
Identification and characterization of ncRNA-associated ceRNA networks in Arabidopsis leaf development. BMC genomics 19 (1) (2018)
Qilin Li, Chao Zhang, Hongjun Chen, Jitong Xue, Xiaolei Guo, Ming Liang, Ming Chen
BioPepDB: an integrated data platform for food-derived bioactive peptides. International journal of food sciences and nutrition 69 (8) (2018)