Nicholas M Fountain-Jones (Nicholas Fountain-Jones)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 29

Top Topics

Toxoplasma Gondii

Multidrug Resistant

Infectious Diseases

Machine Learning

Top Venues

Molecular ecology

The Journal of animal ecology

PLoS neglected tropical diseases

Journal of mammalogy

This page only lists publications with an associated author ORCID identifier.

Publications

Woei Jiun Tan, Scott Carver, Alynn M Martin, Nicholas M Fountain-Jones, Kirstin M Proft, Christopher P Burridge
Sex and landscape influence spatial genetic variation in a large fossorial mammal, the Bare-nosed Wombat ( Vombatus ursinus ). Journal of mammalogy 105 (3) (2024)
Woei Jiun Tan, Scott Carver, Alynn M Martin, Nicholas M Fountain-Jones, Kirstin M Proft, Christopher P Burridge
Sex and landscape influence spatial genetic variation in a large fossorial mammal, the Bare-nosed Wombat ( Vombatus ursinus ). Journal of mammalogy 105 (3) (2024)
Nicholas M Fountain-Jones, Benedict S Khoo, Austin Rau, Jesse D Berman, Erin N Burton, Jonathan D Oliver
Positive associations matter: Microbial relationships drive tick microbiome composition. Molecular ecology (2023)
Nicholas M Fountain-Jones, Mathew Silk, Raima Carol Appaw, Rodrigo Hamede, Julie Rushmore, Kimberly L VanderWaal, Meggan E Craft, Scott Carver, Michael Charleston
The spectral underpinnings of pathogen spread on animal networks. Proceedings. Biological sciences 290 (2007) (2023)
Nicholas M Fountain-Jones, Tatiana Giraud, Lucie Zinger, Holly M Bik, Simon Creer, Elin Videvall
Molecular ecology of microbiomes in the wild: Common pitfalls, methodological advances and future directions. Molecular ecology (2023)
Nicholas M Fountain-Jones, Benedict S Khoo, Austin Rau, Jesse D Berman, Erin N Burton, Jonathan D Oliver
Positive associations matter: Microbial relationships drive tick microbiome composition. Molecular ecology (2023)
Andrew S Flies, Emily J Flies, Nicholas M Fountain-Jones, Ruth E Musgrove, Rodrigo K Hamede, Annie Philips, Matthew R F Perrott, Magdalena Dunowska
Wildlife nidoviruses: biology, epidemiology, and disease associations of selected nidoviruses of mammals and reptiles. mBio (2023)
Moh A Alkhamis, Nicholas M Fountain-Jones, Mohammad M Khajah, Mohammad Alghounaim, Salman Al Sabah
Comparative phylodynamics reveals the evolutionary history of SARS-CoV-2 emerging variants in the Arabian Peninsula. Virus evolution 8 (1) (2022)
Nicholas M Fountain-Jones, Simona J Kraberger, Roderick B Gagne, Marie L J Gilbertson, Daryl R Trumbo, Michael A Charleston, Patricia E Salerno, W Chris Funk, Kevin Crooks, Kenneth Logan, Mathew Alldredge, Simon Dellicour, Guy Baele, Xavier Didelot, Susan VandeWoude, Scott Carver, Meggan E Craft
Hunting alters viral transmission and evolution in a large carnivore. Nature ecology & evolution 6 (2) (2022)
Faisal Alsayegh, Moh A Alkhamis, Fatima Ali, Sreeja Attur, Nicholas M Fountain-Jones, Mohammad Zubaid
Anemia or other comorbidities? using machine learning to reveal deeper insights into the drivers of acute coronary syndromes in hospital admitted patients. PloS one 17 (1) (2022)
Nicholas M Fountain-Jones, Simona Kraberger, Roderick B Gagne, Daryl R Trumbo, Patricia E Salerno, W Chris Funk, Kevin Crooks, Roman Biek, Mathew Alldredge, Ken Logan, Guy Baele, Simon Dellicour, Holly B Ernest, Susan VandeWoude, Scott Carver, Meggan E Craft
Host relatedness and landscape connectivity shape pathogen spread in the puma, a large secretive carnivore. Communications biology 4 (1) (2021)
Joel Cuffey, Christopher A Lepczyk, Shuoli Zhao, Nicholas M Fountain-Jones
Cross-sectional association of Toxoplasma gondii exposure with BMI and diet in US adults. PLoS neglected tropical diseases 15 (10) (2021)
Moh A Alkhamis, Nicholas M Fountain-Jones, Cecilia Aguilar-Vega, José M Sánchez-Vizcaíno
Environment, vector, or host? Using machine learning to untangle the mechanisms driving arbovirus outbreaks. Ecological applications : a publication of the Ecological Society of America 31 (7) (2021)
Jonathan D Oliver, Nicholas M Fountain-Jones
Interspecies bacterial communication produces a delicate balance between Vibrio cholerae and the chironomid egg mass microbiome. Molecular ecology 30 (7) (2021)
Nicholas M Fountain-Jones, Megan L Smith, Frédéric Austerlitz
Machine learning in molecular ecology. Molecular ecology resources 21 (8) (2021)
Nicholas M Fountain-Jones, Christopher P Kozakiewicz, Brenna R Forester, Erin L Landguth, Scott Carver, Michael Charleston, Roderick B Gagne, Brandon Greenwell, Simona Kraberger, Daryl R Trumbo, Michael Mayer, Nicholas J Clark, Gustavo Machado
MrIML: Multi-response interpretable machine learning to model genomic landscapes. Molecular ecology resources 21 (8) (2021)
Jorge Eduardo Rabinovich, Agustín Alvarez Costa, Ignacio J Muñoz, Pablo E Schilman, Nicholas M Fountain-Jones
Machine-learning model led design to experimentally test species thermal limits: The case of kissing bugs (Triatominae). PLoS neglected tropical diseases 15 (3) (2021)
Julie K Weckworth, Brian W Davis, Edward Dubovi, Nicholas M Fountain-Jones, Craig Packer, Sarah Cleaveland, Meggan E Craft, Ernest Eblate, Michael Schwartz, L Scott Mills, Melody Roelke-Parker
Cross-species transmission and evolutionary dynamics of canine distemper virus during a spillover in African lions of Serengeti National Park. Molecular ecology 29 (22) (2020)
Nicholas M Fountain-Jones, Nicholas J Clark, Amy C Kinsley, Michelle Carstensen, James D Forester, Timothy J Johnson, Elizabeth A Miller, Seth Moore, Tiffany M Wolf, Meggan E Craft
Microbial associations and spatial proximity predict North American moose (Alces alces) gastrointestinal community composition. The Journal of animal ecology 89 (3) (2020)
Nicholas M Fountain-Jones, Raima Carol Appaw, Scott Carver, Xavier Didelot, Erik Volz, Michael Charleston
Emerging phylogenetic structure of the SARS-CoV-2 pandemic. Virus evolution 6 (2) (2020)
Ellen E Brandell, Nicholas M Fountain-Jones, Marie L J Gilbertson, Paul C Cross, Peter J Hudson, Douglas W Smith, Daniel R Stahler, Craig Packer, Meggan E Craft
Group density, disease, and season shape territory size and overlap of social carnivores. The Journal of animal ecology 90 (1) (2020)
Christopher P Kozakiewicz, Christopher P Burridge, W Chris Funk, Meggan E Craft, Kevin R Crooks, Robert N Fisher, Nicholas M Fountain-Jones, Megan K Jennings, Simona J Kraberger, Justin S Lee, Lisa M Lyren, Seth P D Riley, Laurel E K Serieys, Sue VandeWoude, Scott Carver
Does the virus cross the road? Viral phylogeographic patterns among bobcat populations reflect a history of urban development. Evolutionary applications 13 (8) (2020)
Katherine E L Worsley-Tonks, Luis E Escobar, Roman Biek, Mariana Castaneda-Guzman, Meggan E Craft, Daniel G Streicker, Lauren A White, Nicholas M Fountain-Jones
Using host traits to predict reservoir host species of rabies virus. PLoS neglected tropical diseases 14 (12) (2020)
Nicholas M Fountain-Jones, Gustavo Machado, Scott Carver, Craig Packer, Mariana Recamonde-Mendoza, Meggan E Craft
How to make more from exposure data? An integrated machine learning pipeline to predict pathogen exposure. The Journal of animal ecology 88 (10) (2019)
Daryl R Trumbo, Patricia E Salerno, Kenneth A Logan, Mathew W Alldredge, Roderick B Gagne, Christopher P Kozakiewicz, Simona Kraberger, Nicholas M Fountain-Jones, Meggan E Craft, Scott Carver, Holly B Ernest, Kevin R Crooks, Sue VandeWoude, W Chris Funk
Urbanization impacts apex predator gene flow but not genetic diversity across an urban-rural divide. Molecular ecology 28 (22) (2019)
Dibesh B Karmacharya, Prajwol Manandhar, Sulochana Manandhar, Adarsh M Sherchan, Ajay N Sharma, Jyoti Joshi, Manisha Bista, Shailendra Bajracharya, Nagendra P Awasthi, Netra Sharma, Bronwyn Llewellyn, Lisette P Waits, Kanchan Thapa, Marcella J Kelly, Momchilo Vuyisich, Shawn R Starkenburg, Jean-Marc Hero, Jane Hughes, Claudia Wultsch, Laura Bertola, Nicholas M Fountain-Jones, Amit K Sinha
Gut microbiota and their putative metabolic functions in fragmented Bengal tiger population of Nepal. PloS one 14 (8) (2019)
Nicholas M Fountain-Jones, William D Pearse, Luis E Escobar, Ana Alba-Casals, Scott Carver, T Jonathan Davies, Simona Kraberger, Monica Papeş, Kurt Vandegrift, Katherine Worsley-Tonks, Meggan E Craft
Towards an eco-phylogenetic framework for infectious disease ecology. Biological reviews of the Cambridge Philosophical Society 93 (2) (2017)
Nicholas M Fountain-Jones, Craig Packer, Jennifer L Troyer, Kimberly VanderWaal, Stacie Robinson, Maude Jacquot, Meggan E Craft
Linking social and spatial networks to viral community phylogenetics reveals subtype-specific transmission dynamics in African lions. The Journal of animal ecology 86 (6) (2017)
Nicholas M Fountain-Jones, Meggan E Craft, W Chris Funk, Chris Kozakiewicz, Daryl R Trumbo, Erin E Boydston, Lisa M Lyren, Kevin Crooks, Justin S Lee, Sue VandeWoude, Scott Carver
Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore. Molecular ecology 26 (22) (2017)