Nobuhiko Tokuriki (N Tokuriki)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 29

Top Topics

Klebsiella Pneumoniae

Multidrug Resistant

Protein Protein

Top Venues

Nature communications

Journal of the American Chemical Society

Nature catalysis

This page only lists publications with an associated author ORCID identifier.

Publications

Pouria Dasmeh, Jia Zheng, Ayşe Nisan Erdoğan, Nobuhiko Tokuriki, Andreas Wagner
Rapid evolutionary change in trait correlations of single proteins. Nature communications 15 (1) (2024)
Jake W Saunders, Adam M Damry, Vanessa Vongsouthi, Matthew A Spence, Rebecca L Frkic, Chloe Gomez, Patrick A Yates, Dana S Matthews, Nobuhiko Tokuriki, Malcolm Donald McLeod, Colin J Jackson
Increasing the Soluble Expression and Whole-Cell Activity of the Plastic-Degrading Enzyme MHETase through Consensus Design. Biochemistry (2024)
Christopher Fröhlich, H Adrian Bunzel, Karol Buda, Adrian J Mulholland, Marc W Van der Kamp, Pål J Johnsen, Hanna-Kirsti S Leiros, Nobuhiko Tokuriki
Epistasis arises from shifting the rate-limiting step during enzyme evolution of a β-lactamase. Nature catalysis 7 (5) (2024)
Christopher Fröhlich, H Adrian Bunzel, Karol Buda, Adrian J Mulholland, Marc W Van der Kamp, Pål J Johnsen, Hanna-Kirsti S Leiros, Nobuhiko Tokuriki
Epistasis arises from shifting the rate-limiting step during enzyme evolution of a β-lactamase. Nature catalysis 7 (5) (2024)
Pouria Dasmeh, Jia Zheng, Ayşe Nisan Erdoğan, Nobuhiko Tokuriki, Andreas Wagner
Rapid evolutionary change in trait correlations of single proteins. Nature communications 15 (1) (2024)
Pouria Dasmeh, Jia Zheng, Ayşe Nisan Erdoğan, Nobuhiko Tokuriki, Andreas Wagner
Rapid evolutionary change in trait correlations of single proteins. Nature communications 15 (1) (2024)
Pouria Dasmeh, Jia Zheng, Ayşe Nisan Erdoğan, Nobuhiko Tokuriki, Andreas Wagner
Rapid evolutionary change in trait correlations of single proteins. Nature communications 15 (1) (2024)
Pouria Dasmeh, Jia Zheng, Ayşe Nisan Erdoğan, Nobuhiko Tokuriki, Andreas Wagner
Rapid evolutionary change in trait correlations of single proteins. Nature communications 15 (1) (2024)
Jake W Saunders, Adam M Damry, Vanessa Vongsouthi, Matthew A Spence, Rebecca L Frkic, Chloe Gomez, Patrick A Yates, Dana S Matthews, Nobuhiko Tokuriki, Malcolm Donald McLeod, Colin J Jackson
Increasing the Soluble Expression and Whole-Cell Activity of the Plastic-Degrading Enzyme MHETase through Consensus Design. Biochemistry 63 (13) (2024)
Morito Sakuma, Shingo Honda, Hiroshi Ueno, Kazuhito V Tabata, Kentaro Miyazaki, Nobuhiko Tokuriki, Hiroyuki Noji
Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase. Journal of the American Chemical Society 145 (5) (2023)
Karol Buda, Charlotte M Miton, Nobuhiko Tokuriki
Pervasive epistasis exposes intramolecular networks in adaptive enzyme evolution. Nature communications 14 (1) (2023)
Karol Buda, Charlotte M Miton, Nobuhiko Tokuriki
Pervasive epistasis exposes intramolecular networks in adaptive enzyme evolution. Nature communications 14 (1) (2023)
Morito Sakuma, Shingo Honda, Hiroshi Ueno, Kazuhito V Tabata, Kentaro Miyazaki, Nobuhiko Tokuriki, Hiroyuki Noji
Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase. Journal of the American Chemical Society 145 (5) (2023)
Morito Sakuma, Shingo Honda, Hiroshi Ueno, Kazuhito V Tabata, Kentaro Miyazaki, Nobuhiko Tokuriki, Hiroyuki Noji
Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase. Journal of the American Chemical Society 145 (5) (2023)
Morito Sakuma, Shingo Honda, Hiroshi Ueno, Kazuhito V Tabata, Kentaro Miyazaki, Nobuhiko Tokuriki, Hiroyuki Noji
Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase. Journal of the American Chemical Society 145 (5) (2023)
Morito Sakuma, Shingo Honda, Hiroshi Ueno, Kazuhito V Tabata, Kentaro Miyazaki, Nobuhiko Tokuriki, Hiroyuki Noji
Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase. Journal of the American Chemical Society 145 (5) (2023)
Karol Buda, Charlotte M Miton, Nobuhiko Tokuriki
Pervasive epistasis exposes intramolecular networks in adaptive enzyme evolution. Nature communications 14 (1) (2023)
Karol Buda, Charlotte M Miton, Nobuhiko Tokuriki
Pervasive epistasis exposes intramolecular networks in adaptive enzyme evolution. Nature communications 14 (1) (2023)
Morito Sakuma, Shingo Honda, Hiroshi Ueno, Kazuhito V Tabata, Kentaro Miyazaki, Nobuhiko Tokuriki, Hiroyuki Noji
Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase. Journal of the American Chemical Society 145 (5) (2023)
Morito Sakuma, Shingo Honda, Hiroshi Ueno, Kazuhito V Tabata, Kentaro Miyazaki, Nobuhiko Tokuriki, Hiroyuki Noji
Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase. Journal of the American Chemical Society (2023)
Charlotte M Miton, Nobuhiko Tokuriki
Insertions and Deletions (Indels): A Missing Piece of the Protein Engineering Jigsaw. Biochemistry (2022)
John Z Chen, Douglas M Fowler, Nobuhiko Tokuriki
Environmental selection and epistasis in an empirical phenotype-environment-fitness landscape. Nature ecology & evolution 6 (4) (2022)
Dave W Anderson, Florian Baier, Gloria Yang, Nobuhiko Tokuriki
The adaptive landscape of a metallo-enzyme is shaped by environment-dependent epistasis. Nature communications 12 (1) (2021)
Gloria Yang, Charlotte M Miton, Nobuhiko Tokuriki
A mechanistic view of enzyme evolution. Protein science : a publication of the Protein Society 29 (8) (2021)
John Z Chen, Douglas M Fowler, Nobuhiko Tokuriki
Comprehensive exploration of the translocation, stability and substrate recognition requirements in VIM-2 lactamase. eLife 9 (2020)
Ghader Bashiri, James Antoney, Ehab N M Jirgis, Mihir V Shah, Blair Ney, Janine Copp, Stephanie M Stuteley, Sreevalsan Sreebhavan, Brian Palmer, Martin Middleditch, Nobuhiko Tokuriki, Chris Greening, Colin Scott, Edward N Baker, Colin J Jackson
A revised biosynthetic pathway for the cofactor F420 in prokaryotes. Nature communications 10 (1) (2019)
Florian Baier, Nansook Hong, Gloria Yang, Anna Pabis, Charlotte M Miton, Alexandre Barrozo, Paul D Carr, Shina Caroline Lynn Kamerlin, Colin J Jackson, Nobuhiko Tokuriki
Cryptic genetic variation shapes the adaptive evolutionary potential of enzymes. eLife 8 (2019)
Gloria Yang, Dave W Anderson, Florian Baier, Elias Dohmen, Nansook Hong, Paul D Carr, Shina Caroline Lynn Kamerlin, Colin J Jackson, Erich Bornberg-Bauer, Nobuhiko Tokuriki
Higher-order epistasis shapes the fitness landscape of a xenobiotic-degrading enzyme. Nature chemical biology 15 (11) (2019)
Janine N Copp, Eyal Akiva, Patricia C Babbitt, Nobuhiko Tokuriki
Revealing Unexplored Sequence-Function Space Using Sequence Similarity Networks. Biochemistry 57 (31) (2018)