Omer Gokcumen (O Gokcumen)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 29

Top Venues

eLife

Nature communications

American journal of biological anthropology

bioRxiv : the preprint server for biology

University at Buffalo

University of Pennsylvania (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University at Buffalo

United States

Associate Professor :: Biological Sciences

University at Buffalo

United States

Assistant Professor :: Biology

Harvard Medical School

United States

Postdoctoral Fellow

Education History

University of Pennsylvania

United States

PHD :: Anthropology

Bogazici University

Turkey

BSC :: Molecular Biology and Genetics

Publications

Petar Pajic, Luane Landau, Omer Gokcumen, Stefan Ruhl
Emergence of saliva protein genes in the secretory calcium-binding phosphoprotein (SCPP) locus and accelerated evolution in primates. bioRxiv : the preprint server for biology (2024)
Alber Aqil, Yanyan Li, Zhiliang Wang, Saiful Islam, Madison Russell, Theodora Kunovac Kallak, Marie Saitou, Omer Gokcumen, Naoki Masuda
Switch-like Gene Expression Modulates Disease Susceptibility. bioRxiv : the preprint server for biology (2024)
Petar Pajic, Luane Landau, Omer Gokcumen, Stefan Ruhl
Emergence of saliva protein genes in the secretory calcium-binding phosphoprotein (SCPP) locus and accelerated evolution in primates. bioRxiv : the preprint server for biology (2024)
Yu Huining Sun, Hongxiao Cui, Chi Song, Jiafei Teng Shen, Xiaoyu Zhuo, Ruoqiao Huiyi Wang, Xiaohui Yu, Rudo Ndamba, Qian Mu, Hanwen Gu, Duolin Wang, Gayathri Guru Murthy, Pidong Li, Fan Yang, Lei Liu, Qing Tao, Ying Wang, Sara Orlowski, Qi Xu, Huaijun Zhou, Jarra Jagne, Omer Gokcumen, Nick Anthony, Xin Zhao, Xin Zhiguo Li
Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity. Nature communications 14 (1) (2023)
Alber Aqil, Leo Speidel, Pavlos Pavlidis, Omer Gokcumen
Balancing selection on genomic deletion polymorphisms in humans. eLife 12 (2023)
Yu Huining Sun, Hongxiao Cui, Chi Song, Jiafei Teng Shen, Xiaoyu Zhuo, Ruoqiao Huiyi Wang, Xiaohui Yu, Rudo Ndamba, Qian Mu, Hanwen Gu, Duolin Wang, Gayathri Guru Murthy, Pidong Li, Fan Yang, Lei Liu, Qing Tao, Ying Wang, Sara Orlowski, Qi Xu, Huaijun Zhou, Jarra Jagne, Omer Gokcumen, Nick Anthony, Xin Zhao, Xin Zhiguo Li
Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity. Nature communications 14 (1) (2023)
Alber Aqil, Leo Speidel, Pavlos Pavlidis, Omer Gokcumen
Balancing selection on genomic deletion polymorphisms in humans. eLife 12 (2023)
Yu Huining Sun, Hongxiao Cui, Chi Song, Jiafei Teng Shen, Xiaoyu Zhuo, Ruoqiao Huiyi Wang, Xiaohui Yu, Rudo Ndamba, Qian Mu, Hanwen Gu, Duolin Wang, Gayathri Guru Murthy, Pidong Li, Fan Yang, Lei Liu, Qing Tao, Ying Wang, Sara Orlowski, Qi Xu, Huaijun Zhou, Jarra Jagne, Omer Gokcumen, Nick Anthony, Xin Zhao, Xin Zhiguo Li
Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity. Nature communications 14 (1) (2023)
Alber Aqil, Leo Speidel, Pavlos Pavlidis, Omer Gokcumen
Balancing selection on genomic deletion polymorphisms in humans. eLife 12 (2023)
Alber Aqil, Leo Speidel, Pavlos Pavlidis, Omer Gokcumen
Balancing selection on genomic deletion polymorphisms in humans. eLife 12 (2023)
Alber Aqil, Leo Speidel, Pavlos Pavlidis, Omer Gokcumen
Balancing selection on genomic deletion polymorphisms in humans. eLife 12 (2023)
Yu Huining Sun, Hongxiao Cui, Chi Song, Jiafei Teng Shen, Xiaoyu Zhuo, Ruoqiao Huiyi Wang, Xiaohui Yu, Rudo Ndamba, Qian Mu, Hanwen Gu, Duolin Wang, Gayathri Guru Murthy, Pidong Li, Fan Yang, Lei Liu, Qing Tao, Ying Wang, Sara Orlowski, Qi Xu, Huaijun Zhou, Jarra Jagne, Omer Gokcumen, Nick Anthony, Xin Zhao, Xin Zhiguo Li
Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity. Nature communications 14 (1) (2023)
Carrie C Veilleux, Eva C Garrett, Petar Pajic, Marie Saitou, Joseph Ochieng, Lilia D Dagsaan, Nathaniel J Dominy, George H Perry, Omer Gokcumen, Amanda Dawn Melin
Human subsistence and signatures of selection on chemosensory genes. Communications biology 6 (1) (2023)
Andre Luiz Campelo Dos Santos, Henry Socrates Lavalle Sullasi, Omer Gokcumen, John Lindo, Michael DeGiorgio
Spatiotemporal fluctuations of population structure in the Americas revealed by a meta-analysis of the first decade of archaeogenomes. American journal of biological anthropology 180 (4) (2022)
Andre Luiz Campelo Dos Santos, Henry Socrates Lavalle Sullasi, Omer Gokcumen, John Lindo, Michael DeGiorgio
Spatiotemporal fluctuations of population structure in the Americas revealed by a meta-analysis of the first decade of archaeogenomes. American journal of biological anthropology 180 (4) (2022)
Joni Nikkanen, Yew Ann Leong, William C Krause, Denis Dermadi, J Alan Maschek, Tyler Van Ry, James Eric Cox, Ethan J Weiss, Omer Gokcumen, Ajay Chawla, Holly A Ingraham
An evolutionary trade-off between host immunity and metabolism drives fatty liver in male mice. Science (New York, N.Y.) 378 (6617) (2022)
Andre Luiz Campelo Dos Santos, Henry Socrates Lavalle Sullasi, Omer Gokcumen, John Lindo, Michael DeGiorgio
Spatiotemporal fluctuations of population structure in the Americas revealed by a meta-analysis of the first decade of archaeogenomes. American journal of biological anthropology 180 (4) (2022)
Petar Pajic, Shichen Shen, Jun Qu, Alison J May, Sarah M Knox, Stefan Ruhl, Omer Gokcumen
A mechanism of gene evolution generating mucin function. Science advances 8 (34) (2022)
Izzy Starr, Kristina Seiffert-Sinha, Animesh A Sinha, Omer Gokcumen
Evolutionary context of psoriatic immune skin response. Evolution, medicine, and public health 9 (1) (2021)
Marie Saitou, Skyler Resendez, Apoorva J Pradhan, Fuguo Wu, Natasha C Lie, Nancy J Hall, Qihui Zhu, Laura Reinholdt, Yoko Satta, Leo Speidel, Shigeki Nakagome, Neil A Hanchard, Gary A Churchill, Charles Lee, G Ekin Atilla-Gokcumen, Xiuqian Mu, Omer Gokcumen
Sex-specific phenotypic effects and evolutionary history of an ancient polymorphic deletion of the human growth hormone receptor. Science advances 7 (39) (2021)
Ozgur Taskent, Yen Lung Lin, Ioannis Patramanis, Pavlos Pavlidis, Omer Gokcumen
Analysis of Haplotypic Variation and Deletion Polymorphisms Point to Multiple Archaic Introgression Events, Including from Altai Neanderthal Lineage. Genetics 215 (2) (2020)
Duo Xu, Omer Gokcumen, Ekta Khurana
Loss-of-function tolerance of enhancers in the human genome. PLoS genetics 16 (4) (2020)
Omer Gokcumen
Archaic hominin introgression into modern human genomes. American journal of physical anthropology (2019)
Petar Pajic, Pavlos Pavlidis, Kirsten Dean, Lubov Neznanova, Rose-Anne Romano, Danielle Garneau, Erin Daugherity, Anja Globig, Stefan Ruhl, Omer Gokcumen
Independent amylase gene copy number bursts correlate with dietary preferences in mammals. eLife 8 (2019)
Marie Saitou, Omer Gokcumen
An Evolutionary Perspective on the Impact of Genomic Copy Number Variation on Human Health. Journal of molecular evolution 88 (1) (2019)
Jacky Chow, Izzy Starr, Sheida Jamalzadeh, Omar Muniz, Anuj Kumar, Omer Gokcumen, Denise M Ferkey, Paul J Cullen
Filamentation Regulatory Pathways Control Adhesion-Dependent Surface Responses in Yeast. Genetics 212 (3) (2019)
Marie Saitou, Y Satta, Omer Gokcumen
Complex Haplotypes of GSTM1 Gene Deletions Harbor Signatures of a Selective Sweep in East Asian Populations. G3 (Bethesda, Md.) 8 (9) (2018)
M Saitou, Y Satta, Omer Gokcumen, T Ishida
Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees. BMC genomics 19 (1) (2018)
Petar Pajic, Yen-Lung Lin, Duo Xu, Omer Gokcumen
The psoriasis-associated deletion of late cornified envelope genes LCE3B and LCE3C has been maintained under balancing selection since Human Denisovan divergence. BMC evolutionary biology 16 (1) (2016)

Omer Gokcumen.css-eqlu8i{font-size:small;padding-left:4px;} (O Gokcumen)

Publication Activity (10 Years)

Top Topics

Top Venues

Omer Gokcumen (O Gokcumen)