Pengfei Dong

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 26

Top Topics

Bipolar Disorder

Transcription Factor

Heat Shock Protein

Top Venues

Nature communications

Molecular psychiatry

Nature genetics

This page only lists publications with an associated author ORCID identifier.

Publications

Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Author Correction: Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Author Correction: Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Miguel Rodriguez de Los Santos, Brian H Kopell, Ariela Buxbaum Grice, Gauri Ganesh, Andy Yang, Pardis Amini, Lora E Liharska, Eric Vornholt, John F Fullard, Pengfei Dong, Eric Park, Sarah Zipkowitz, Deepak A Kaji, Ryan C Thompson, Dongjing Liu, You Jeong Park, Esther Cheng, Kimia Ziafat, Emily Moya, Brian Fennessy, Lillian Wilkins, Hannah Silk, Lisa M Linares, Brendan Sullivan, Vanessa Cohen, Prashant Kota, Claudia Feng, Jessica S Johnson, Marysia-Kolbe Rieder, Joseph Scarpa, Girish Nitin Nadkarni, Minghui Wang, Bin Zhang, Pamela Sklar, Noam D Beckmann, Eric E Schadt, Panagiotis Roussos, Alexander W Charney, Michael S Breen
Divergent landscapes of A-to-I editing in postmortem and living human brain. Nature communications 15 (1) (2024)
Buddhini Ranawaka, Jiyuan An, Michał T Lorenc, Hyungtaek Jung, Maria Sulli, Giuseppe Aprea, Sally Roden, Victor Llaca, Satomi Hayashi, Leila Asadyar, Zacharie LeBlanc, Zuba Ahmed, Fatima Naim, Samanta Bolzan de Campos, Tal Cooper, Felipe Fenselau de Felippes, Pengfei Dong, Silin Zhong, Victor Garcia-Carpintero, Diego Orzaez, Kevin J Dudley, Aureliano Bombarely, Julia Bally, Christopher S Winefield, Giovanni Giuliano, Peter M Waterhouse
Author Correction: A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology. Nature plants (2024)
Pengfei Dong, Georgios Voloudakis, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos
Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers. Molecular psychiatry 29 (3) (2023)
David Burstein, Trevor C Griffen, Karen Therrien, Jaroslav Bendl, Sanan Venkatesh, Pengfei Dong, Amirhossein Modabbernia, Biao Zeng, Deepika Mathur, Gabriel E Hoffman, Robyn Sysko, Tom Hildebrandt, Georgios Voloudakis, Panagiotis Roussos
Genome-wide analysis of a model-derived binge eating disorder phenotype identifies risk loci and implicates iron metabolism. Nature genetics (2023)
Buddhini Ranawaka, Jiyuan An, Michał T Lorenc, Hyungtaek Jung, Maria Sulli, Giuseppe Aprea, Sally Roden, Victor Llaca, Satomi Hayashi, Leila Asadyar, Zacharie LeBlanc, Zuba Ahmed, Fatima Naim, Samanta Bolzan de Campos, Tal Cooper, Felipe Fenselau de Felippes, Pengfei Dong, Silin Zhong, Victor Garcia-Carpintero, Diego Orzaez, Kevin J Dudley, Aureliano Bombarely, Julia Bally, Christopher S Winefield, Giovanni Giuliano, Peter M Waterhouse
A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology. Nature plants (2023)
Pengfei Dong, Georgios Voloudakis, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos
Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers. Molecular psychiatry (2023)
Pengfei Dong, Georgios Voloudakis, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos
Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers. Molecular psychiatry 29 (3) (2023)
Pengfei Dong, Georgios Voloudakis, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos
Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers. Molecular psychiatry 29 (3) (2023)
Kiran Girdhar, Jaroslav Bendl, Andrew Baumgartner, Karen Therrien, Sanan Venkatesh, Deepika Mathur, Pengfei Dong, Samir Rahman, Steven Kleopoulos, Ruth Misir, Sarah Reach, Pavan Auluck, Stefano Marenco, David Lewis, Vahram Haroutunian, Cory Funk, Georgios Voloudakis, Gabriel E Hoffman, John F Fullard, Panagiotis Roussos
The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development. Research square (2023)
Pengfei Dong, Georgios Voloudakis, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos
Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers. Molecular psychiatry (2023)
Wenjun Zhu, Hua Li, Pengfei Dong, Xueting Ni, Minlei Fan, Yingjie Yang, Shiyao Xu, Yanbing Xu, Yangwen Qian, Zhuo Chen, Peitao Lü
Low-temperature-induced regulatory network rewiring via WRKY regulators during banana peel browning. Plant physiology (2023)
Samir Rahman, Pengfei Dong, Pasha Apontes, Michael B Fernando, Roman Kosoy, Kayla G Townsley, Kiran Girdhar, Jaroslav Bendl, Zhiping Shao, Ruth Misir, Nadia Tsankova, Steven P Kleopoulos, Kristen J Brennand, John F Fullard, Panagiotis Roussos
Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome. Nucleic acids research (2023)
Pengfei Dong, Georgios Voloudakis, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos
Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers. Molecular psychiatry 29 (3) (2023)
Roman Kosoy, John F Fullard, Biao Zeng, Jaroslav Bendl, Pengfei Dong, Samir Rahman, Steven P Kleopoulos, Zhiping Shao, Kiran Girdhar, Jack Humphrey, Katia de Paiva Lopes, Alexander W Charney, Brian H Kopell, Towfique Raj, David Bennett, Christopher P Kellner, Vahram Haroutunian, Gabriel E Hoffman, Panagiotis Roussos
Genetics of the human microglia regulome refines Alzheimer's disease risk loci. Nature genetics 54 (8) (2022)
Kiran Girdhar, Gabriel E Hoffman, Jaroslav Bendl, Samir Rahman, Pengfei Dong, Will Liao, Mads E Hauberg, Laura Sloofman, Leanne Brown, Olivia Devillers, Bibi S Kassim, Jennifer R Wiseman, Royce Park, Elizabeth Zharovsky, Rivky Jacobov, Elie Flatow, Alexey Kozlenkov, Thomas Gilgenast, Jessica S Johnson, Lizette Couto, Mette A Peters, Jennifer E Phillips-Cremins, Chang-Gyu Hahn, Raquel E Gur, Carol A Tamminga, David A Lewis, Vahram Haroutunian, null null, Stella Dracheva, Barbara K Lipska, Stefano Marenco, Marija Kundakovic, John F Fullard, Yan Jiang, Panagiotis Roussos, Schahram Akbarian
Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains. Nature neuroscience 25 (4) (2022)
Pengfei Dong, Gabriel E Hoffman, Pasha Apontes, Jaroslav Bendl, Samir Rahman, Michael B Fernando, Biao Zeng, James M Vicari, Wen Zhang, Kiran Girdhar, Kayla G Retallick-Townsley, Ruth Misir, null null, Kristen J Brennand, Vahram Haroutunian, Georgios Voloudakis, John F Fullard, Panagiotis Roussos
Population-level variation in enhancer expression identifies disease mechanisms in the human brain. Nature genetics 54 (10) (2022)
Jaroslav Bendl, Mads Engel Hauberg, Kiran Girdhar, Eunju Im, James M Vicari, Samir Rahman, Michael B Fernando, Kayla G Retallick-Townsley, Pengfei Dong, Ruth Misir, Steven P Kleopoulos, Sarah M Reach, Pasha Apontes, Biao Zeng, Wen Zhang, Georgios Voloudakis, Kristen J Brennand, Ralph A Nixon, Vahram Haroutunian, Gabriel E Hoffman, John F Fullard, Panagiotis Roussos
The three-dimensional landscape of cortical chromatin accessibility in Alzheimer's disease. Nature neuroscience 25 (10) (2022)
Xiuru Dai, Xiaoyu Tu, Baijuan Du, Pengfei Dong, Shilei Sun, Xianglan Wang, Jing Sun, Gang Li, Tiegang Lu, Silin Zhong, Pinghua Li
Chromatin and regulatory differentiation between bundle sheath and mesophyll cells in maize. The Plant journal : for cell and molecular biology (2021)