Petr Jurečka

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 11

Top Topics

Molecular Dynamics Simulations

Single Molecule

Top Venues

Journal of chemical theory and computation

The journal of physical chemistry. B

Chemical reviews

Journal of chemical information and modeling

This page only lists publications with an associated author ORCID identifier.

Publications

Olivia Love, Rodrigo Galindo-Murillo, Marie Zgarbová, Jiřı Šponer, Petr Jurečka, Thomas E Cheatham
Assessing the Current State of Amber Force Field Modifications for DNA─2023 Edition. Journal of chemical theory and computation (2023)
Martin Šulka, Katarína Šulková, Petr Jurečka, Matúš Dubecký
Dynamic and Nondynamic Electron Correlation Energy Decomposition Based on the Node of the Hartree-Fock Slater Determinant. Journal of chemical theory and computation (2023)
Jiří Fukal, Marie Zgarbová, Petr Jurečka, Jakub Šebera, Vladimír Sychrovský
Probabilistic Interpretation of NMR J -Couplings Determines BI-BII State Equilibria in DNA. Journal of chemical theory and computation 18 (11) (2022)
Marie Zgarbová, Jiřı Šponer, Petr Jurečka
Z-DNA as a Touchstone for Additive Empirical Force Fields and a Refinement of the Alpha/Gamma DNA Torsions for AMBER. Journal of chemical theory and computation 17 (10) (2021)
Matúš Dubecký, Petr Jurečka, Lubos Mitas, Matej Ditte, Roman Fanta
Toward Accurate Hydrogen Bonds by Scalable Quantum Monte Carlo. Journal of chemical theory and computation 15 (6) (2019)
Jiřı Šponer, Giovanni Bussi, Miroslav Krepl, Pavel Banáš, Sandro Bottaro, Richard A Cunha, Alejandro Gil-Ley, Giovanni Pinamonti, Simón Poblete, Petr Jurečka, Nils G Walter, Michal Otyepka
RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview. Chemical reviews 118 (8) (2018)
Marie Zgarbová, Petr Jurečka, Pavel Banáš, Marek Havrila, Jiří Šponer, Michal Otyepka
Noncanonical α/γ Backbone Conformations in RNA and the Accuracy of Their Description by the AMBER Force Field. The journal of physical chemistry. B 121 (11) (2017)
František Karlický, Eva Otyepková, Rabindranath Lo, Michal Pitoňák, Petr Jurečka, Martin Pykal, Pavel Hobza, Michal Otyepka
Adsorption of Organic Molecules to van der Waals Materials: Comparison of Fluorographene and Fluorographite with Graphene and Graphite. Journal of chemical theory and computation 13 (3) (2017)
Marie Zgarbová, Petr Jurečka, Filip Lankaš, Thomas E Cheatham, Jiří Šponer, Michal Otyepka
Influence of BII Backbone Substates on DNA Twist: A Unified View and Comparison of Simulation and Experiment for All 136 Distinct Tetranucleotide Sequences. Journal of chemical information and modeling 57 (2) (2017)
Marie Zgarbová, Petr Jurečka, Jiřı Šponer, Michal Otyepka
A- to B-DNA Transition in AMBER Force Fields and Its Coupling to Sugar Pucker. Journal of chemical theory and computation 14 (1) (2017)
Vojtěch Mlýnský, Petra Kührová, Petr Jurečka, Jiří Šponer, Michal Otyepka, Pavel Banáš
Mapping the Chemical Space of the RNA Cleavage and Its Implications for Ribozyme Catalysis. The journal of physical chemistry. B 121 (48) (2017)