Petr Kolenko

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 17

Top Venues

Acta crystallographica. Section D, Structural biology

The Journal of biological chemistry

Acta crystallographica. Section F, Structural biology communications

IUCrJ

Institute of Biotechnology CAS, v.v.i.

Czech Technical University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Institute of Biotechnology CAS, v.v.i. Jul 01 2015

Czechia

researcher :: Laboratory of structure and function of biomolecules

Institute of Macromolecular Chemistry AS CR, v.v.i. Aug 01 2006 - Jun 30 2015

Czechia

researcher :: Structural analysis of biomacromolecules

Institute of Biochemistry and Biotechnology Jan 01 2010 - Jun 30 2012

Germany

researcher :: Physical Biotechnology

Education History

Czech Technical University Jul 01 2006 - Jun 30 2009

Czechia

PHD :: Faculty of Nuclear Sciences and Physical Engineering

Publications

Jakub Svoboda, Daniel Berdár, Petr Kolenko, Jiri Cerny, Zora Novakova, Jiří Pavlíček, Bohdan Schneider
Conformation-based refinement of 18-mer DNA structures. Acta crystallographica. Section D, Structural biology (2023)
Martin Malý, Petr Kolenko, Jan Stránský, Leona Švecová, Jarmila Dušková, Tomáš Koval', Tereza Skalova, Mária Trundová, Kristýna Adámková, Jiri Cerny, Paulína Božíková, Jan Dohnalek
Tetracycline-modifying enzyme SmTetX from Stenotrophomonas maltophilia. Acta crystallographica. Section F, Structural biology communications (2023)
Jon Agirre, Mihaela Atanasova, Haroldas Bagdonas, Charles B Ballard, Arnaud Baslé, James Beilsten-Edmands, Rafael Junqueira Borges, David G Brown, J Javier Burgos-Mármol, John M Berrisford, Paul S Bond, Iracema Caballero, Lucrezia Catapano, Grzegorz Chojnowski, Atlanta G Cook, Kathryn D Cowtan, Tristan I Croll, Judit É Debreczeni, Nicholas E Devenish, Eleanor J Dodson, Tarik R Drevon, Paul Emsley, Gwyndaf Evans, Phil R Evans, Maria Fando, James Foadi, Luis Fuentes-Montero, Elspeth F Garman, Markus Gerstel, Richard J Gildea, Kaushik Hatti, Maarten L Hekkelman, Philipp Heuser, Soon Wen Hoh, Michael A Hough, Huw T Jenkins, Elisabet Jiménez, Robbie P Joosten, Ronan M Keegan, Nicholas H Keep, Eugene B Krissinel, Petr Kolenko, Oleg Kovalevskiy, Victor S Lamzin, David M Lawson, Andrey A Lebedev, Andrew G W Leslie, Bernhard Lohkamp, Fei Long, Martin Malý, Airlie J McCoy, Stuart J McNicholas, Ana Medina, Claudia Millán, James W Murray, Garib N Murshudov, Robert A Nicholls, Martin E M Noble, Robert D Oeffner, Navraj S Pannu, James M Parkhurst, Nicholas Pearce, Joana Pereira, Anastassis Perrakis, Harold R Powell, Randy J Read, Daniel J Rigden, William Rochira, Massimo D Sammito, Filomeno Sánchez Rodríguez, George M Sheldrick, Kathryn L Shelley, Felix Simkovic, Adam J Simpkin, Pavol Skubák, Egor Sobolev, Roberto A Steiner, Kyle Stevenson, Ivo Tews, Jens M H Thomas, Andrea Thorn, Josep Triviño Valls, Ville Uski, Isabel Usón, Alexei Vagin, Sameer Velankar, Melanie Vollmar, Helen Walden, David Geoffrey Waterman, Keith S Wilson, Martyn David Winn, Graeme Winter, Marcin Wojdyr, Keitaro Yamashita
The CCP4 suite: integrative software for macromolecular crystallography. Acta crystallographica. Section D, Structural biology 79 (Pt 6) (2023)
Petr Kolenko, Pavel Mikulecky, Phuong Ngoc Pham, Martin Malý, Bohdan Schneider
Diffraction anisotropy and paired refinement: crystal structure of H33, a protein binder to interleukin 10. Journal of applied crystallography 56 (Pt 4) (2023)
Kristýna Adámková, Tomáš Koval', Lars Henrik Østergaard, Jarmila Dušková, Martin Malý, Leona Švecová, Tereza Skalova, Petr Kolenko, Jan Dohnalek
Atomic resolution studies of S1 nuclease complexes reveal details of RNA interaction with the enzyme despite multiple lattice-translocation defects. Acta crystallographica. Section D, Structural biology 78 (Pt 10) (2022)
Terézia Koval'ová, Tomáš Koval', Jan Stránský, Petr Kolenko, Jarmila Dušková, Leona Švecová, Patricie Vodičková, Vojtech Spiwok, Eva Benešová, Petra Lipovová, Jan Dohnalek
The first structure-function study of GH151 α-l-fucosidase uncovers new oligomerization pattern, active site complementation, and selective substrate specificity. The FEBS journal 289 (16) (2022)
Martin Malý, Kay Diederichs, Jan Dohnalek, Petr Kolenko
PAIREF: paired refinement also for Phenix users. Acta crystallographica. Section F, Structural biology communications 77 (Pt 7) (2021)
Nadine Taudte, Miriam Linnert, Jens-Ulrich Rahfeld, Anke Piechotta, Daniel Ramsbeck, Mirko Buchholz, Petr Kolenko, Christoph Parthier, John A Houston, Florian Veillard, Sigrun Eick, Jan Potempa, Stephan Schilling, Hans-Ulrich Demuth, Milton T Stubbs
Mammalian-like type II glutaminyl cyclases in Porphyromonas gingivalis and other oral pathogenic bacteria as targets for treatment of periodontitis. The Journal of biological chemistry (2021)
Jan Dohnalek, Jarmila Dušková, Galina Tishchenko, Petr Kolenko, Tereza Skalova, Petr Novák, Karla Fejfarová, Jiří Šimůnek
Chitinase Chit62J4 Essential for Chitin Processing by Human Microbiome Bacterium Clostridium paraputrificum J4. Molecules (Basel, Switzerland) 26 (19) (2021)
Andrii Mazur, Tatyana Prudnikova, Pavel Grinkevich, Jeroen R Mesters, Daria Mrazova, Radka Chaloupkova, Jiri Damborsky, Michal Kuty, Petr Kolenko, Ivana Kuta Smatanova
The tetrameric structure of the novel haloalkane dehalogenase DpaA from Paraglaciecola agarilytica NO2. Acta crystallographica. Section D, Structural biology 77 (Pt 3) (2021)
Phuong Ngoc Pham, Maroš Huličiak, Lada Biedermannová, Jiri Cerny, Tatsiana Charnavets, Gustavo Fuertes, Štěpán Herynek, Lucie Kolářová, Petr Kolenko, Jiří Pavlíček, Jiří Zahradník, Pavel Mikulecky, Bohdan Schneider
Protein Binder (ProBi) as a New Class of Structurally Robust Non-Antibody Protein Scaffold for Directed Evolution. Viruses 13 (2) (2021)
Leona Švecová, Lars Henrik Østergaard, Tereza Skalova, Kirk Matthew Schnorr, Tomáš Koval', Petr Kolenko, Jan Stránský, David Sedlák, Jarmila Dušková, Mária Trundová, Jindřich Hašek, Jan Dohnalek
Crystallographic fragment screening-based study of a novel FAD-dependent oxidoreductase from Chaetomium thermophilum. Corrigendum. Acta crystallographica. Section D, Structural biology 77 (Pt 7) (2021)
Leona Švecová, Lars Henrik Østergaard, Tereza Skalova, Kirk Matthew Schnorr, Tomáš Koval', Petr Kolenko, Jan Stránský, David Sedlák, Jarmila Dušková, Mária Trundová, Jindřich Hašek, Jan Dohnalek
Crystallographic fragment screening-based study of a novel FAD-dependent oxidoreductase from Chaetomium thermophilum. Acta crystallographica. Section D, Structural biology 77 (Pt 6) (2021)
Petr Kolenko, Jakub Svoboda, Jiri Cerny, Tatsiana Charnavets, Bohdan Schneider
Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches. Acta crystallographica. Section D, Structural biology 76 (Pt 12) (2020)
Martin Malý, Kay Diederichs, Jan Dohnalek, Petr Kolenko
Paired refinement under the control of PAIREF. IUCrJ 7 (Pt 4) (2020)
Tomáš Koval', Leona Švecová, Lars Henrik Østergaard, Tereza Skalova, Jarmila Dušková, Jindřich Hašek, Petr Kolenko, Karla Fejfarová, Jan Stránský, Mária Trundová, Jan Dohnalek
Trp-His covalent adduct in bilirubin oxidase is crucial for effective bilirubin binding but has a minor role in electron transfer. Scientific reports 9 (1) (2019)
Martin Stranava, Petr Man, Tereza Skalova, Petr Kolenko, Jan Bláha, Veronika Fojtikova, Václav Martínek, Jan Dohnalek, Alzbeta Lengalova, Michal Rosůlek, Toru Shimizu, Markéta Martínková
Coordination and redox state-dependent structural changes of the heme-based oxygen sensor AfGcHK associated with intraprotein signal transduction. The Journal of biological chemistry 292 (51) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Petr Kolenko