Petr Novák (Petr Novak)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 50

Top Venues

Analytical chemistry

Journal of proteome research

International journal of molecular sciences

Protein science : a publication of the Protein Society

Institute of Microbiology

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Institute of Microbiology Sep 01 2004

Czechia

Head of the Lab :: Laboratory of Structure Biology and Cell Signaling

Publications

Zuzana Matoušková, Katarína Orsághová, Pavel Srb, Jana Pytelková, Zdeněk Kukačka, Michal Buša, Ondřej Hajdušek, Radek Šíma, Milan Fábry, Petr Novák, Martin Horn, Petr Kopáček, Michael Mareš
An Unusual Two-Domain Thyropin from Tick Saliva: NMR Solution Structure and Highly Selective Inhibition of Cysteine Cathepsins Modulated by Glycosaminoglycans. International journal of molecular sciences 25 (4) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Lukáš Fojtík, Zuzana Kalaninová, Jan Fiala, Petr Halada, Josef Chmelík, Petr Man, Zdeněk Kukačka, Petr Novák
Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting. Analytical chemistry 96 (19) (2024)
Marek Zakopcanik, Daniel Kavan, Zdeněk Kukačka, Petr Novák, Dmitry S Loginov
Data-Independent Acquisition Represents a Promising Alternative for Fast Photochemical Oxidation of Proteins (FPOP) Samples Analysis. Analytical chemistry 96 (28) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Lukáš Fojtík, Zuzana Kalaninová, Jan Fiala, Petr Halada, Josef Chmelík, Petr Man, Zdeněk Kukačka, Petr Novák
Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting. Analytical chemistry 96 (19) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Lukáš Fojtík, Zuzana Kalaninová, Jan Fiala, Petr Halada, Josef Chmelík, Petr Man, Zdeněk Kukačka, Petr Novák
Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting. Analytical chemistry 96 (19) (2024)
Kristína Felčíková, Andrej Hovan, Marek Polák, Dmitry S Loginov, Veronika Holotová, Carlos Díaz, Tibor Kožár, One-Sun Lee, Rastislav Varhač, Petr Novák, Gregor Bánó, Erik Sedlák
Design of AsLOV2 domain as a carrier of light-induced dissociable FMN photosensitizer. Protein science : a publication of the Protein Society 33 (4) (2024)
Marek Zakopcanik, Daniel Kavan, Zdeněk Kukačka, Petr Novák, Dmitry S Loginov
Data-Independent Acquisition Represents a Promising Alternative for Fast Photochemical Oxidation of Proteins (FPOP) Samples Analysis. Analytical chemistry (2024)
Marek Zakopcanik, Daniel Kavan, Zdeněk Kukačka, Petr Novák, Dmitry S Loginov
Data-Independent Acquisition Represents a Promising Alternative for Fast Photochemical Oxidation of Proteins (FPOP) Samples Analysis. Analytical chemistry 96 (28) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Lukáš Fojtík, Zuzana Kalaninová, Jan Fiala, Petr Halada, Josef Chmelík, Petr Man, Zdeněk Kukačka, Petr Novák
Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting. Analytical chemistry 96 (19) (2024)
Zuzana Matoušková, Katarína Orsághová, Pavel Srb, Jana Pytelková, Zdeněk Kukačka, Michal Buša, Ondřej Hajdušek, Radek Šíma, Milan Fábry, Petr Novák, Martin Horn, Petr Kopáček, Michael Mareš
An Unusual Two-Domain Thyropin from Tick Saliva: NMR Solution Structure and Highly Selective Inhibition of Cysteine Cathepsins Modulated by Glycosaminoglycans. International journal of molecular sciences 25 (4) (2024)
Marek Zakopcanik, Daniel Kavan, Zdeněk Kukačka, Petr Novák, Dmitry S Loginov
Data-Independent Acquisition Represents a Promising Alternative for Fast Photochemical Oxidation of Proteins (FPOP) Samples Analysis. Analytical chemistry 96 (28) (2024)
Marek Zakopcanik, Daniel Kavan, Zdeněk Kukačka, Petr Novák, Dmitry S Loginov
Data-Independent Acquisition Represents a Promising Alternative for Fast Photochemical Oxidation of Proteins (FPOP) Samples Analysis. Analytical chemistry 96 (28) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Zuzana Matoušková, Katarína Orsághová, Pavel Srb, Jana Pytelková, Zdeněk Kukačka, Michal Buša, Ondřej Hajdušek, Radek Šíma, Milan Fábry, Petr Novák, Martin Horn, Petr Kopáček, Michael Mareš
An Unusual Two-Domain Thyropin from Tick Saliva: NMR Solution Structure and Highly Selective Inhibition of Cysteine Cathepsins Modulated by Glycosaminoglycans. International journal of molecular sciences 25 (4) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry (2024)
Lukáš Fojtík, Zuzana Kalaninová, Jan Fiala, Petr Halada, Josef Chmelík, Petr Man, Zdeněk Kukačka, Petr Novák
Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting. Analytical chemistry (2024)
Kristína Felčíková, Andrej Hovan, Marek Polák, Dmitry S Loginov, Veronika Holotová, Carlos Díaz, Tibor Kožár, One-Sun Lee, Rastislav Varhač, Petr Novák, Gregor Bánó, Erik Sedlák
Design of AsLOV2 domain as a carrier of light-induced dissociable FMN photosensitizer. Protein science : a publication of the Protein Society 33 (4) (2024)
Lukáš Fojtík, Zuzana Kalaninová, Jan Fiala, Petr Halada, Josef Chmelík, Petr Man, Zdeněk Kukačka, Petr Novák
Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting. Analytical chemistry 96 (19) (2024)
Marek Zakopcanik, Daniel Kavan, Petr Novák, Dmitry S Loginov
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis. Journal of proteome research 23 (2) (2023)
Marek Zakopcanik, Daniel Kavan, Petr Novák, Dmitry S Loginov
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis. Journal of proteome research 23 (2) (2023)
Marek Zakopcanik, Daniel Kavan, Petr Novák, Dmitry S Loginov
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis. Journal of proteome research 23 (2) (2023)
Marek Zakopcanik, Daniel Kavan, Petr Novák, Dmitry S Loginov
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis. Journal of proteome research 23 (2) (2023)
Marek Polák, Michael Palasser, Alan Kádek, Daniel Kavan, Christopher A Wootton, Marc-André Delsuc, Kathrin Breuker, Petr Novák, Maria A van Agthoven
Top-Down Proteoform Analysis by 2D MS with Quadrupolar Detection. Analytical chemistry (2023)
Eliška Koutná, Vanda Lux, Tomas Kouba, Jana Škerlová, Jiri Novacek, Pavel Srb, Rozalie Hexnerova, Hana Šváchová, Zdeněk Kukačka, Petr Novák, Milan Fábry, Simon Poepsel, Vaclav Veverka
Multivalency of nucleosome recognition by LEDGF. Nucleic acids research (2023)
Marek Zakopcanik, Daniel Kavan, Petr Novák, Dmitry S Loginov
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis. Journal of proteome research (2023)
Thomas Lambert, Marius Gramlich, Luisa Stutzke, Luke Smith, Dingyu Deng, Philipp D Kaiser, Ulrich Rothbauer, Justin L P Benesch, Cornelia Wagner, Maximiliane Koenig, Petr Pompach, Petr Novák, Anne Zeck, Kasper Dyrberg Rand
Development of a PNGase Rc Column for Online Deglycosylation of Complex Glycoproteins during HDX-MS. Journal of the American Society for Mass Spectrometry (2023)
Pieter-Jan Vermeire, Anastasia V Lilina, Hani M Hashim, Lada Dlabolová, Jan Fiala, Steven Beelen, Zdeněk Kukačka, Jeremy N Harvey, Petr Novák, Sergei V Strelkov
Molecular structure of soluble vimentin tetramers. Scientific reports 13 (1) (2023)
Zuzana Kalaninová, Lukáš Fojtík, Josef Chmelík, Petr Novák, Michael Volny, Petr Man
Probing Antibody Structures by Hydrogen/Deuterium Exchange Mass Spectrometry. Methods in molecular biology (Clifton, N.J.) 2718 (2023)
Marek Zakopcanik, Daniel Kavan, Petr Novák, Dmitry S Loginov
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis. Journal of proteome research 23 (2) (2023)
Brennen Heames, Filip Buchel, Margaux Aubel, Vyacheslav Tretyachenko, Dmitry Loginov, Petr Novák, Andreas Lange, Erich Bornberg-Bauer, Klara Hlouchova
Experimental characterization of de novo proteins and their unevolved random-sequence counterparts. Nature ecology & evolution (2023)
Marek Polák, Ghazaleh Yassaghi, Daniel Kavan, František Filandr, Jan Fiala, Zdeněk Kukačka, Petr Halada, Dmitry S Loginov, Petr Novák
Utilization of Fast Photochemical Oxidation of Proteins and Both Bottom-up and Top-down Mass Spectrometry for Structural Characterization of a Transcription Factor-dsDNA Complex. Analytical chemistry 94 (7) (2022)
Ghazaleh Yassaghi, Zdeněk Kukačka, Jan Fiala, Daniel Kavan, Petr Halada, Michael Volný, Petr Novák
Top-Down Detection of Oxidative Protein Footprinting by Collision-Induced Dissociation, Electron-Transfer Dissociation, and Electron-Capture Dissociation. Analytical chemistry 94 (28) (2022)
Zdeněk Kukačka, Michal Rosůlek, Jan Jelínek, Lukáš Slavata, Daniel Kavan, Petr Novák
LinX: A Software Tool for Uncommon Cross-Linking Chemistry. Journal of proteome research 20 (4) (2021)
Lukáš Fojtík, Jan Fiala, Petr Pompach, Josef Chmelík, Václav Matoušek, Petr Beier, Zdeněk Kukačka, Petr Novák
Fast Fluoroalkylation of Proteins Uncovers the Structure and Dynamics of Biological Macromolecules. Journal of the American Chemical Society (2021)
Jan Dohnalek, Jarmila Dušková, Galina Tishchenko, Petr Kolenko, Tereza Skalova, Petr Novák, Karla Fejfarová, Jiří Šimůnek
Chitinase Chit62J4 Essential for Chitin Processing by Human Microbiome Bacterium Clostridium paraputrificum J4. Molecules (Basel, Switzerland) 26 (19) (2021)
Dmitry S Loginov, Jan Fiala, Josef Chmelik, Peter Brechlin, Gary Kruppa, Petr Novák
Benefits of Ion Mobility Separation and Parallel Accumulation-Serial Fragmentation Technology on timsTOF Pro for the Needs of Fast Photochemical Oxidation of Protein Analysis. ACS omega 6 (15) (2021)
Dmitry S Loginov, Jan Fiala, Josef Chmelik, Peter Brechlin, Gary Kruppa, Petr Novák
Correction to "Benefits of Ion Mobility Separation and Parallel Accumulation-Serial Fragmentation Technology on timsTOF Pro for the Needs of Fast Photochemical Oxidation of Protein Analysis". ACS omega 6 (22) (2021)
Pieter-Jan Vermeire, Giel Stalmans, Anastasia V Lilina, Jan Fiala, Petr Novák, Harald Herrmann, Sergei V Strelkov
Molecular Interactions Driving Intermediate Filament Assembly. Cells 10 (9) (2021)
Giel Stalmans, Anastasia V Lilina, Pieter-Jan Vermeire, Jan Fiala, Petr Novák, Sergei V Strelkov
Addressing the Molecular Mechanism of Longitudinal Lamin Assembly Using Chimeric Fusions. Cells 9 (7) (2020)
Karel Vališ, Petr Novák
Targeting ERK-Hippo Interplay in Cancer Therapy. International journal of molecular sciences 21 (9) (2020)
Jana Fialova, Jaroslav Hrabak, Vendula Studentova, Daniel Kavan, Petr Pompach, Petr Novák
Three-Dimensional Printed Target Plates for Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry. Analytical chemistry 92 (19) (2020)
Ljubina Adámková, Zuzana Kvíčalová, Daniel Rozbeský, Zdeněk Kukačka, David Adámek, Marek Cebecauer, Petr Novák
Oligomeric Architecture of Mouse Activating Nkrp1 Receptors on Living Cells. International journal of molecular sciences 20 (8) (2019)
Miroslav Flieger, Eva Stodůlková, Stephen A Wyka, Jan Černý, Valéria Grobárová, Kamila Píchová, Petr Novák, Petr Man, Marek Kuzma, Ladislav Cvak, Kirk D Broders, Miroslav Kolarik
Ergochromes: Heretofore Neglected Side of Ergot Toxicity. Toxins 11 (8) (2019)
Claudio Iacobucci, Christine Piotrowski, Ruedi Aebersold, Bruno C Amaral, Philip Andrews, Katja Bernfur, Christoph H Borchers, Nicolas I Brodie, James E Bruce, Yong Cao, Stéphane Chaignepain, Juan D Chavez, Stéphane Claverol, Juergen Cox, Trisha Davis, Gianluca Degliesposti, Meng-Qiu Dong, Nufar Edinger, Cecilia Emanuelsson, Marina Gay, Michael Götze, Francisco Gomes-Neto, Fabio César Gozzo, Craig Gutierrez, Caroline Haupt, Albert J R Heck, Franz Herzog, Lan Huang, Michael R Hoopmann, Nir Kalisman, Oleg Klykov, Zdeněk Kukačka, Fan Liu, Michael J MacCoss, Karl Mechtler, Ravit Mesika, Robert L Moritz, Nagarjuna Nagaraj, Victor Nesati, Ana G C Neves-Ferreira, Robert Ninnis, Petr Novák, Francis J O'Reilly, Matthias Pelzing, Evgeniy Petrotchenko, Lolita Piersimoni, Manolo Plasencia, Tara Louise Pukala, Kasper Dyrberg Rand, Juri Rappsilber, Dana Reichmann, Carolin Sailer, Chris P Sarnowski, Richard A Scheltema, Carla Schmidt, David C Schriemer, Yi Shi, J Mark Skehel, Moriya Slavin, Frank Sobott, Victor Solis-Mezarino, Heike Stephanowitz, Florian Stengel, Christian E Stieger, Esben Trabjerg, Michael Trnka, Marta Vilaseca, Rosa Viner, Yufei Xiang, Sule Yilmaz, Alex Zelter, Daniel Ziemianowicz, Alexander Leitner, Andrea Sinz
First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study. Analytical chemistry 91 (11) (2019)
Aleš Hnízda, Milan Fábry, Takaya Moriyama, Petr Pachl, Michael Kugler, Vítězslav Brinsa, David B Ascher, William L Carroll, Petr Novák, Markéta Žaliová, Jan Trka, Pavlína Řezáčová, Jun J Yang, Vaclav Veverka
Relapsed acute lymphoblastic leukemia-specific mutations in NT5C2 cluster into hotspots driving intersubunit stimulation. Leukemia 32 (6) (2018)
Daniel Rozbeský, Michal Rosůlek, Zdeněk Kukačka, Josef Chmelík, Petr Man, Petr Novák
Impact of Chemical Cross-Linking on Protein Structure and Function. Analytical chemistry 90 (2) (2018)

Petr Novák.css-eqlu8i{font-size:small;padding-left:4px;} (Petr Novak)

Publication Activity (10 Years)

Top Topics

Top Venues

Petr Novák (Petr Novak)