Jiri Cerny (Jiří Černý, J Cerny)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 59

Top Venues

Journal of chemical information and modeling

ACS chemical neuroscience

The Journal of neuroscience : the official journal of the Society for Neuroscience

Analytical chemistry

Academy of Sciences of the Czech Republic

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Academy of Sciences of the Czech Republic Oct 01 2008

Czechia

Head of Laboratory of Structural Bioinformatics of Proteins :: Institute of Biotechnology

Publications

Bohdan Kysilov, Viktor Kuchtiak, Barbora Hrcka Krausova, Ales Balik, Miloslav Korinek, Klevinda Fili, Mark Dobrovolski, Vera Abramova, Hana Chodounska, Eva Kudova, Paulína Božíková, Jiri Cerny, Tereza Smejkalova, Ladislav Vyklicky
Disease-associated nonsense and frame-shift variants resulting in the truncation of the GluN2A or GluN2B C-terminal domain decrease NMDAR surface expression and reduce potentiating effects of neurosteroids. Cellular and molecular life sciences : CMLS 81 (1) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Zora Novakova, Zahra Aliakbar Tehrani, Radek Jurok, Lucia Motlova, Zsófia Kutil, Jiri Pavlicek, Shivam Shukla, Cindy J Choy, Barbora Havlinova, Petra Baranova, Clifford E Berkman, Martin Kuchar, Jiri Cerny, Cyril Barinka
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors. Journal of chemical information and modeling 64 (3) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore Pintilie, Stephen Burley, Jiri Cerny, Vincent Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael Prisant, Randy J Read, Jane S Richardson, Alexis Rohou, Bohdan Schneider, Benjamin Sellers, Chenghua Chao, Elizabeth Sourial, Chris Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel Moriarty, Andrew Muenks, Garib Murshudov, Robert Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar Pothula, Christopher Rowley, Daipayan Sarkar, Luisa Schäfer, Christopher Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea Vaiana, Sundeep Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen Berman, Wah Chiu
Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge. Research square (2024)
Zora Novakova, Zahra Aliakbar Tehrani, Radek Jurok, Lucia Motlova, Zsófia Kutil, Jiri Pavlicek, Shivam Shukla, Cindy J Choy, Barbora Havlinova, Petra Baranova, Clifford E Berkman, Martin Kuchar, Jiri Cerny, Cyril Barinka
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors. Journal of chemical information and modeling 64 (3) (2024)
Bohdan Kysilov, Viktor Kuchtiak, Barbora Hrcka Krausova, Ales Balik, Miloslav Korinek, Klevinda Fili, Mark Dobrovolski, Vera Abramova, Hana Chodounska, Eva Kudova, Paulína Božíková, Jiri Cerny, Tereza Smejkalova, Ladislav Vyklicky
Disease-associated nonsense and frame-shift variants resulting in the truncation of the GluN2A or GluN2B C-terminal domain decrease NMDAR surface expression and reduce potentiating effects of neurosteroids. Cellular and molecular life sciences : CMLS 81 (1) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Miriam Candelas Serra, Viktor Kuchtiak, Agnieszka Kubik-Zahorodna, Bohdan Kysilov, Klevinda Fili, Barbora Hrcka Krausova, Vera Abramova, Mark Dobrovolski, Karel Harant, Paulina Bozikova, Jiri Cerny, Jan Prochazka, Petr Kasparek, Radislav Sedlacek, Ales Balik, Tereza Smejkalova, Ladislav Vyklicky
Characterization of Mice Carrying a Neurodevelopmental Disease-Associated GluN2B(L825V) Variant. The Journal of neuroscience : the official journal of the Society for Neuroscience 44 (31) (2024)
Zora Novakova, Zahra Aliakbar Tehrani, Radek Jurok, Lucia Motlova, Zsófia Kutil, Jiri Pavlicek, Shivam Shukla, Cindy J Choy, Barbora Havlinova, Petra Baranova, Clifford E Berkman, Martin Kuchar, Jiri Cerny, Cyril Barinka
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors. Journal of chemical information and modeling 64 (3) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael G Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge. Nature methods 21 (7) (2024)
Bohdan Kysilov, Viktor Kuchtiak, Barbora Hrcka Krausova, Ales Balik, Miloslav Korinek, Klevinda Fili, Mark Dobrovolski, Vera Abramova, Hana Chodounska, Eva Kudova, Paulína Božíková, Jiri Cerny, Tereza Smejkalova, Ladislav Vyklicky
Disease-associated nonsense and frame-shift variants resulting in the truncation of the GluN2A or GluN2B C-terminal domain decrease NMDAR surface expression and reduce potentiating effects of neurosteroids. Cellular and molecular life sciences : CMLS 81 (1) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge. Research square (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael G Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge. Nature methods 21 (7) (2024)
Zora Novakova, Zahra Aliakbar Tehrani, Radek Jurok, Lucia Motlova, Zsófia Kutil, Jiri Pavlicek, Shivam Shukla, Cindy J Choy, Barbora Havlinova, Petra Baranova, Clifford E Berkman, Martin Kuchar, Jiri Cerny, Cyril Barinka
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors. Journal of chemical information and modeling (2024)
Miriam Candelas Serra, Viktor Kuchtiak, Agnieszka Kubik-Zahorodna, Bohdan Kysilov, Klevinda Fili, Barbora Hrcka Krausova, Vera Abramova, Mark Dobrovolski, Karel Harant, Paulina Bozikova, Jiri Cerny, Jan Prochazka, Petr Kasparek, Radislav Sedlacek, Ales Balik, Tereza Smejkalova, Ladislav Vyklicky
Characterization of Mice Carrying a Neurodevelopmental Disease-Associated GluN2B(L825V) Variant. The Journal of neuroscience : the official journal of the Society for Neuroscience 44 (31) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael G Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge. Nature methods (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry 96 (4) (2024)
Marek Polák, Jiri Cerny, Petr Novák
Isotopic Depletion Increases the Spatial Resolution of FPOP Top-Down Mass Spectrometry Analysis. Analytical chemistry (2024)
Miriam Candelas Serra, Viktor Kuchtiak, Agnieszka Kubik-Zahorodna, Bohdan Kysilov, Klevinda Fili, Barbora Hrcka Krausova, Vera Abramova, Mark Dobrovolski, Karel Harant, Paulina Bozikova, Jiri Cerny, Jan Prochazka, Petr Kasparek, Radislav Sedlacek, Ales Balik, Tereza Smejkalova, Ladislav Vyklicky
Characterization of Mice Carrying a Neurodevelopmental Disease-Associated GluN2B(L825V) Variant. The Journal of neuroscience : the official journal of the Society for Neuroscience 44 (31) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge. Research square (2024)
Zora Novakova, Zahra Aliakbar Tehrani, Radek Jurok, Lucia Motlova, Zsófia Kutil, Jiri Pavlicek, Shivam Shukla, Cindy J Choy, Barbora Havlinova, Petra Baranova, Clifford E Berkman, Martin Kuchar, Jiri Cerny, Cyril Barinka
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors. Journal of chemical information and modeling 64 (3) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore Pintilie, Stephen Burley, Jiri Cerny, Vincent Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael Prisant, Randy J Read, Jane S Richardson, Alexis Rohou, Bohdan Schneider, Benjamin Sellers, Chenghua Chao, Elizabeth Sourial, Chris Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel Moriarty, Andrew Muenks, Garib Murshudov, Robert Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar Pothula, Christopher Rowley, Daipayan Sarkar, Luisa Schäfer, Christopher Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea Vaiana, Sundeep Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen Berman, Wah Chiu
Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge. Research square (2024)
Bohdan Kysilov, Viktor Kuchtiak, Barbora Hrcka Krausova, Ales Balik, Miloslav Korinek, Klevinda Fili, Mark Dobrovolski, Vera Abramova, Hana Chodounska, Eva Kudova, Paulína Božíková, Jiri Cerny, Tereza Smejkalova, Ladislav Vyklicky
Disease-associated nonsense and frame-shift variants resulting in the truncation of the GluN2A or GluN2B C-terminal domain decrease NMDAR surface expression and reduce potentiating effects of neurosteroids. Cellular and molecular life sciences : CMLS 81 (1) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael G Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge. Nature methods 21 (7) (2024)
Zora Novakova, Zahra Aliakbar Tehrani, Radek Jurok, Lucia Motlova, Zsófia Kutil, Jiri Pavlicek, Shivam Shukla, Cindy J Choy, Barbora Havlinova, Petra Baranova, Clifford E Berkman, Martin Kuchar, Jiri Cerny, Cyril Barinka
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors. Journal of chemical information and modeling 64 (3) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge. Research square (2024)
Zora Novakova, Zahra Aliakbar Tehrani, Radek Jurok, Lucia Motlova, Zsófia Kutil, Jiri Pavlicek, Shivam Shukla, Cindy J Choy, Barbora Havlinova, Petra Baranova, Clifford E Berkman, Martin Kuchar, Jiri Cerny, Cyril Barinka
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors. Journal of chemical information and modeling 64 (3) (2024)
Catherine L Lawson, Andriy Kryshtafovych, Grigore D Pintilie, Stephen K Burley, Jiri Cerny, Vincent B Chen, Paul Emsley, Alberto Gobbi, Andrzej Joachimiak, Sigrid Noreng, Michael G Prisant, Randy J Read, Jane S Richardson, Alexis L Rohou, Bohdan Schneider, Benjamin D Sellers, Chenghua Shao, Elizabeth Sourial, Chris I Williams, Christopher J Williams, Ying Yang, Venkat Abbaraju, Pavel V Afonine, Matthew L Baker, Paul S Bond, Thomas L Blundell, Tom Burnley, Arthur Campbell, Renzhi Cao, Jianlin Cheng, Grzegorz Chojnowski, Kathryn D Cowtan, Frank Dimaio, Reza Esmaeeli, Nabin Giri, Helmut Grubmüller, Soon Wen Hoh, Jie Hou, Corey F Hryc, Carola Hunte, Maxim Igaev, Agnel-Praveen Joseph, Wei-Chun Kao, Daisuke Kihara, Dilip Kumar, Lijun Lang, Sean Lin, Sai Raghavendra Maddhuri Venkata Subramaniya, Sumit Mittal, Arup Mondal, Nigel W Moriarty, Andrew Muenks, Garib N Murshudov, Robert A Nicholls, Mateusz Olek, Colin M Palmer, Alberto Perez, Emmi Pohjolainen, Karunakar R Pothula, Christopher N Rowley, Daipayan Sarkar, Luisa U Schäfer, Christopher J Schlicksup, Gunnar F Schröder, Mrinal Shekhar, Dong Si, Abhishek Singharoy, Oleg V Sobolev, Genki Terashi, Andrea C Vaiana, Sundeep C Vedithi, Jacob Verburgt, Xiao Wang, Rangana Warshamanage, Martyn David Winn, Simone Weyand, Keitaro Yamashita, Minglei Zhao, Michael F Schmid, Helen M Berman, Wah Chiu
Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge. Nature methods (2024)
Vera Abramova, Vanessa Leal Alvarado, Martin Hill, Tereza Smejkalova, Michal Maly, Karel Vales, Ivan Dittert, Paulina Bozikova, Bohdan Kysilov, Barbora Hrcka Krausova, Vojtech Vyklicky, Ales Balik, Klevinda Fili, Miloslav Korinek, Hana Chodounska, Eva Kudova, David Ciz, Jan Martinovic, Jiri Cerny, Petr Bartunek, Ladislav Vyklicky
Effects of Pregnanolone Glutamate and Its Metabolites on GABA A and NMDA Receptors and Zebrafish Behavior. ACS chemical neuroscience 14 (10) (2023)
Jakub Svoboda, Daniel Berdár, Petr Kolenko, Jiri Cerny, Zora Novakova, Jiří Pavlíček, Bohdan Schneider
Conformation-based refinement of 18-mer DNA structures. Acta crystallographica. Section D, Structural biology (2023)
Martin Malý, Petr Kolenko, Jan Stránský, Leona Švecová, Jarmila Dušková, Tomáš Koval', Tereza Skalova, Mária Trundová, Kristýna Adámková, Jiri Cerny, Paulína Božíková, Jan Dohnalek
Tetracycline-modifying enzyme SmTetX from Stenotrophomonas maltophilia. Acta crystallographica. Section F, Structural biology communications (2023)
Vera Abramova, Vanessa Leal Alvarado, Martin Hill, Tereza Smejkalova, Michal Maly, Karel Vales, Ivan Dittert, Paulina Bozikova, Bohdan Kysilov, Barbora Hrcka Krausova, Vojtech Vyklicky, Ales Balik, Klevinda Fili, Miloslav Korinek, Hana Chodounska, Eva Kudova, David Ciz, Jan Martinovic, Jiri Cerny, Petr Bartunek, Ladislav Vyklicky
Effects of Pregnanolone Glutamate and Its Metabolites on GABA A and NMDA Receptors and Zebrafish Behavior. ACS chemical neuroscience 14 (10) (2023)
Vera Abramova, Vanessa Leal Alvarado, Martin Hill, Tereza Smejkalova, Michal Maly, Karel Vales, Ivan Dittert, Paulina Bozikova, Bohdan Kysilov, Barbora Hrcka Krausova, Vojtech Vyklicky, Ales Balik, Klevinda Fili, Miloslav Korinek, Hana Chodounska, Eva Kudova, David Ciz, Jan Martinovic, Jiri Cerny, Petr Bartunek, Ladislav Vyklicky
Effects of Pregnanolone Glutamate and Its Metabolites on GABA A and NMDA Receptors and Zebrafish Behavior. ACS chemical neuroscience (2023)
Vera Abramova, Vanessa Leal Alvarado, Martin Hill, Tereza Smejkalova, Michal Maly, Karel Vales, Ivan Dittert, Paulina Bozikova, Bohdan Kysilov, Barbora Hrcka Krausova, Vojtech Vyklicky, Ales Balik, Klevinda Fili, Miloslav Korinek, Hana Chodounska, Eva Kudova, David Ciz, Jan Martinovic, Jiri Cerny, Petr Bartunek, Ladislav Vyklicky
Effects of Pregnanolone Glutamate and Its Metabolites on GABA A and NMDA Receptors and Zebrafish Behavior. ACS chemical neuroscience (2023)
Bohdan Schneider, Blake Alexander Sweeney, Alex Bateman, Jiri Cerny, Tomasz Zok, Marta Szachniuk
When will RNA get its AlphaFold moment? Nucleic acids research (2023)
Vera Abramova, Vanessa Leal Alvarado, Martin Hill, Tereza Smejkalova, Michal Maly, Karel Vales, Ivan Dittert, Paulina Bozikova, Bohdan Kysilov, Barbora Hrcka Krausova, Vojtech Vyklicky, Ales Balik, Klevinda Fili, Miloslav Korinek, Hana Chodounska, Eva Kudova, David Ciz, Jan Martinovic, Jiri Cerny, Petr Bartunek, Ladislav Vyklicky
Effects of Pregnanolone Glutamate and Its Metabolites on GABA A and NMDA Receptors and Zebrafish Behavior. ACS chemical neuroscience 14 (10) (2023)
Vera Abramova, Vanessa Leal Alvarado, Martin Hill, Tereza Smejkalova, Michal Maly, Karel Vales, Ivan Dittert, Paulina Bozikova, Bohdan Kysilov, Barbora Hrcka Krausova, Vojtech Vyklicky, Ales Balik, Klevinda Fili, Miloslav Korinek, Hana Chodounska, Eva Kudova, David Ciz, Jan Martinovic, Jiri Cerny, Petr Bartunek, Ladislav Vyklicky
Effects of Pregnanolone Glutamate and Its Metabolites on GABA A and NMDA Receptors and Zebrafish Behavior. ACS chemical neuroscience 14 (10) (2023)
Lada Biedermannová, Jiri Cerny, Michal Malý, Michaela Nekardová, Bohdan Schneider
Knowledge-based prediction of DNA hydration using hydrated dinucleotides as building blocks. Acta crystallographica. Section D, Structural biology 78 (Pt 8) (2022)
Jana Vondrakova, Michaela Frolikova, Lukas Ded, Jiri Cerny, Pavla Postlerova, Veronika Palenikova, Ondrej Simonik, Zuzana Nahacka, Krystof Basus, Eliska Valaskova, Radek Machan, Allan A Pacey, Zuzana Holubcová, Pavel Koubek, Zuzana Ezrova, Soojin Park, Ruiwu Liu, Raghavendran Partha, Nathan L Clark, Jiri Neuzil, Masahito Ikawa, Kent Erickson, Kit S Lam, Harry Moore, Katerina Dvorakova-Hortova
MAIA, Fc receptor-like 3, supersedes JUNO as IZUMO1 receptor during human fertilization. Science advances 8 (36) (2022)
Bohdan Kysilov, Barbora Hrcka Krausova, Vojtech Vyklicky, Tereza Smejkalova, Miloslav Korinek, Martin Horak, Hana Chodounska, Eva Kudova, Jiri Cerny, Ladislav Vyklicky
Pregnane-based steroids are novel positive NMDA receptor modulators that may compensate for the effect of loss-of-function disease-associated GRIN mutations. British journal of pharmacology 179 (15) (2022)
Katerina Hirschfeldova, Jiri Cerny, Paulina Bozikova, Viktor Kuchtiak, Tobias Rausch, Vladimir Benes, Filip Spaniel, David Gregus, Jiri Horacek, Ladislav Vyklicky, Ales Balik
Evidence for the Association between the Intronic Haplotypes of Ionotropic Glutamate Receptors and First-Episode Schizophrenia. Journal of personalized medicine 11 (12) (2021)
Phuong Ngoc Pham, Maroš Huličiak, Lada Biedermannová, Jiri Cerny, Tatsiana Charnavets, Gustavo Fuertes, Štěpán Herynek, Lucie Kolářová, Petr Kolenko, Jiří Pavlíček, Jiří Zahradník, Pavel Mikulecky, Bohdan Schneider
Protein Binder (ProBi) as a New Class of Structurally Robust Non-Antibody Protein Scaffold for Directed Evolution. Viruses 13 (2) (2021)
Pavla Hubalkova, Marek Ladislav, Vojtech Vyklicky, Tereza Smejkalova, Barbora Hrcka Krausova, Bohdan Kysilov, Jan Krusek, Zaneta Naimová, Miloslav Korinek, Hana Chodounska, Eva Kudova, Jiri Cerny, Ladislav Vyklicky
Palmitoylation Controls NMDA Receptor Function and Steroid Sensitivity. The Journal of neuroscience : the official journal of the Society for Neuroscience 41 (10) (2021)
Jiri Cerny, Paulína Božíková, Michal Malý, Michal Tykač, Lada Biedermannová, Bohdan Schneider
Structural alphabets for conformational analysis of nucleic acids available at dnatco.datmos.org. Acta crystallographica. Section D, Structural biology 76 (Pt 9) (2020)
Barbora Hrcka Krausova, Bohdan Kysilov, Jiri Cerny, Vojtech Vyklicky, Tereza Smejkalova, Marek Ladislav, Ales Balik, Miloslav Korinek, Hana Chodounska, Eva Kudova, Ladislav Vyklicky
Site of Action of Brain Neurosteroid Pregnenolone Sulfate at the N-Methyl-D-Aspartate Receptor. The Journal of neuroscience : the official journal of the Society for Neuroscience 40 (31) (2020)
Petr Kolenko, Jakub Svoboda, Jiri Cerny, Tatsiana Charnavets, Bohdan Schneider
Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches. Acta crystallographica. Section D, Structural biology 76 (Pt 12) (2020)
J Jankovicova, M Frolikova, V Palenikova, E Valaskova, Jiri Cerny, P Secova, M Bartokova, L Horovska, P Manaskova-Postlerova, J Antalikova, Katerina Dvorakova-Hortova
Expression and distribution of CD151 as a partner of alpha6 integrin in male germ cells. Scientific reports 10 (1) (2020)
Jiri Cerny, Paulína Božíková, Aleš Balík, Sergio M Marques, Ladislav Vyklicky
NMDA Receptor Opening and Closing-Transitions of a Molecular Machine Revealed by Molecular Dynamics. Biomolecules 9 (10) (2019)
Michaela Frolikova, Eliska Valaskova, Jiri Cerny, Audrey Lumeau, Natasa Sebkova, Veronika Palenikova, Noemi Sanches-Hernandez, Alzbeta Pohlova, Pavla Postlerova, Katerina Dvorakova-Hortova
Addressing the Compartmentalization of Specific Integrin Heterodimers in Mouse Sperm. International journal of molecular sciences 20 (5) (2019)
Emanuel K Peter, Jiri Cerny
A Hybrid Hamiltonian for the Accelerated Sampling along Experimental Restraints. International journal of molecular sciences 20 (2) (2019)
Katja Škrlec, Petra Zadravec, Marie Hlavničková, Milan Kuchař, Lucie Vaňková, Hana Petroková, Lucie Křížová, Jiri Cerny, Aleš Berlec, Petr Malý
p19-Targeting ILP Protein Blockers of IL-23/Th-17 Pro-Inflammatory Axis Displayed on Engineered Bacteria of Food Origin. International journal of molecular sciences 19 (7) (2018)
Bohdan Schneider, Paulína Boǽíková, Iva Nečasová, Petr Čech, Daniel Svozil, Jiri Cerny
A DNA structural alphabet provides new insight into DNA flexibility. Acta crystallographica. Section D, Structural biology 74 (Pt 1) (2018)
Michaela Frolikova, Pavla Manaskova-Postlerova, Jiri Cerny, Jana Jankovicova, Ondrej Simonik, Alzbeta Pohlova, Petra Secova, Jana Antalíková, Katerina Dvorakova-Hortova
CD9 and CD81 Interactions and Their Structural Modelling in Sperm Prior to Fertilization. International journal of molecular sciences 19 (4) (2018)
Emanuel K Peter, Jiri Cerny
Enriched Conformational Sampling of DNA and Proteins with a Hybrid Hamiltonian Derived from the Protein Data Bank. International journal of molecular sciences 19 (11) (2018)
Marie Hlavničková, Milan Kuchař, Radim Osička, Lucie Vaňková, Hana Petroková, Michal Malý, Jiri Cerny, Petr Arenberger, Petr Malý
ABD-Derived Protein Blockers of Human IL-17 Receptor A as Non-IgG Alternatives for Modulation of IL-17-Dependent Pro-Inflammatory Axis. International journal of molecular sciences 19 (10) (2018)
Bohdan Schneider, Paulína Božíková, Petr Čech, Daniel Svozil, Jiri Cerny
A DNA Structural Alphabet Distinguishes Structural Features of DNA Bound to Regulatory Proteins and in the Nucleosome Core Particle. Genes 8 (10) (2017)
Vojtech Vyklicky, Tereza Smejkalova, Barbora Krausova, Ales Balik, Miloslav Korinek, Jirina Borovska, Martin Horak, Marketa Chvojkova, Lenka Kleteckova, Karel Vales, Jiri Cerny, Michaela Nekardova, Hana Chodounska, Eva Kudova, Ladislav Vyklicky
Preferential Inhibition of Tonically over Phasically Activated NMDA Receptors by Pregnane Derivatives. The Journal of neuroscience : the official journal of the Society for Neuroscience 36 (7) (2016)
Jiri Cerny, Lada Biedermannová, Pavel Mikulecký, Jiří Zahradník, Tatsiana Charnavets, Peter Šebo, Bohdan Schneider
Redesigning protein cavities as a strategy for increasing affinity in protein-protein interaction: interferon- γ receptor 1 as a model. BioMed research international 2015 (2015)

Jiri Cerny.css-eqlu8i{font-size:small;padding-left:4px;} (Jiří Černý, J Cerny)

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Jiri Cerny (Jiří Černý, J Cerny)