R Keith Slotkin

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 24

Top Venues

University of Missouri

University of California Berkeley (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Missouri Sep 01 2018

United States

Associate Professor :: Division of Biological Sciences

The Ohio State University

United States

Associate Professor :: Molecular Genetics

The Ohio State University

United States

Assistant Professor :: Molecular Genetics

Education History

University of California Berkeley

United States

PHD :: Plant and Microbial Biology

Publications

Peng Liu, Kaushik Panda, Seth A Edwards, Ryan Swanson, Hochul Yi, Pratheek Pandesha, Yu-Hung Hung, Gerald Klaas, Xudong Ye, Megan V Collins, Kaili N Renken, Larry A Gilbertson, Veena Veena, C Nathan Hancock, R Keith Slotkin
Transposase-assisted target-site integration for efficient plant genome engineering. Nature 631 (8021) (2024)
Peng Liu, Kaushik Panda, Seth A Edwards, Ryan Swanson, Hochul Yi, Pratheek Pandesha, Yu-Hung Hung, Gerald Klaas, Xudong Ye, Megan V Collins, Kaili N Renken, Larry A Gilbertson, Veena Veena, C Nathan Hancock, R Keith Slotkin
Transposase-assisted target-site integration for efficient plant genome engineering. Nature 631 (8021) (2024)
Marianne C Kramer, Ryan Swanson, R Keith Slotkin
Reading banned regions of genomes. Nature plants (2024)
Peng Liu, Kaushik Panda, Seth A Edwards, Ryan Swanson, Hochul Yi, Pratheek Pandesha, Yu-Hung Hung, Gerald Klaas, Xudong Ye, Megan V Collins, Kaili N Renken, Larry A Gilbertson, Veena Veena, C Nathan Hancock, R Keith Slotkin
Transposase-assisted target-site integration for efficient plant genome engineering. Nature (2024)
Marianne C Kramer, Ryan Swanson, R Keith Slotkin
Reading banned regions of genomes. Nature plants 10 (1) (2024)
Peng Liu, Kaushik Panda, Seth A Edwards, Ryan Swanson, Hochul Yi, Pratheek Pandesha, Yu-Hung Hung, Gerald Klaas, Xudong Ye, Megan V Collins, Kaili N Renken, Larry A Gilbertson, Veena Veena, C Nathan Hancock, R Keith Slotkin
Transposase-assisted target-site integration for efficient plant genome engineering. Nature 631 (8021) (2024)
Peng Liu, Kaushik Panda, Seth A Edwards, Ryan Swanson, Hochul Yi, Pratheek Pandesha, Yu-Hung Hung, Gerald Klaas, Xudong Ye, Megan V Collins, Kaili N Renken, Larry A Gilbertson, Veena Veena, C Nathan Hancock, R Keith Slotkin
Transposase-assisted target-site integration for efficient plant genome engineering. Nature 631 (8021) (2024)
Peng Liu, Kaushik Panda, Seth A Edwards, Ryan Swanson, Hochul Yi, Pratheek Pandesha, Yu-Hung Hung, Gerald Klaas, Xudong Ye, Megan V Collins, Kaili N Renken, Larry A Gilbertson, Veena Veena, C Nathan Hancock, R Keith Slotkin
Transposase-assisted target-site integration for efficient plant genome engineering. Nature 631 (8021) (2024)
Marianne C Kramer, Ryan Swanson, R Keith Slotkin
Reading banned regions of genomes. Nature plants 10 (1) (2024)
Panpan Zhang, Assane Mbodj, Abirami Soundiramourtty, Christel Llauro, Alain Ghesquière, Mathieu Ingouff, R Keith Slotkin, Fr D Ric Pontvianne, Marco Catoni, Marie Mirouze
Extrachromosomal circular DNA and structural variants highlight genome instability in Arabidopsis epigenetic mutants. Nature communications 14 (1) (2023)
Sébastien Bélanger, Marianne C Kramer, Hayden A Payne, Alice Y Hui, R Keith Slotkin, Blake C Meyers, Jeffrey M Staub
Plastid double-stranded RNA transgenes trigger phased small RNA-based gene silencing of nuclear-encoded genes. The Plant cell (2023)
Kaushik Panda, Boominathan Mohanasundaram, Jorge Gutierrez, Lauren McLain, S Elizabeth Castillo, Hudanyun Sheng, Anna Casto, Gustavo Gratacós, Ayan Chakrabarti, Noah Fahlgren, Sona Pandey, Malia A Gehan, R Keith Slotkin
The plant response to high CO 2 levels is heritable and orchestrated by DNA methylation. The New phytologist (2023)
Maria Luz Annacondia, Dimitrije Markovic, Juan Luis Reig-Valiente, Vasileios Skaltsogiannis, Corné M J Pieterse, Velemir Ninkovic, R Keith Slotkin, German Martinez
Aphid feeding induces the relaxation of epigenetic control and the associated regulation of the defense response in Arabidopsis. The New phytologist 230 (3) (2021)
Meredith J Sigman, Kaushik Panda, Rachel Kirchner, Lauren L McLain, Hayden Payne, John Reddy Peasari, Aman Y Husbands, R Keith Slotkin, Andrea D McCue
An siRNA-guided ARGONAUTE protein directs RNA polymerase V to initiate DNA methylation. Nature plants 7 (11) (2021)
Kaushik Panda, R Keith Slotkin
Long-Read cDNA Sequencing Enables a "Gene-Like" Transcript Annotation of Transposable Elements. The Plant cell 32 (9) (2020)
Yan Lai, Xueqing Maggie Lu, Josquin Daron, Songqin Pan, Jianqiang Wang, Wei Wang, Tokuji Tsuchiya, Eric Holub, John M McDowell, R Keith Slotkin, Karine Le Roch, Thomas Eulgem
The Arabidopsis PHD-finger protein EDM2 has multiple roles in balancing NLR immune receptor gene expression. PLoS genetics 16 (9) (2020)
Cedar Warman, Kaushik Panda, Zuzana Vejlupkova, Sam Hokin, Erica Unger-Wallace, Rex A Cole, Antony M Chettoor, Duo Jiang, Erik Vollbrecht, Matthew M S Evans, R Keith Slotkin, John E Fowler
High expression in maize pollen correlates with genetic contributions to pollen fitness as well as with coordinated transcription from neighboring transposable elements. PLoS genetics 16 (4) (2020)
Sarah G Choudury, Saima Shahid, Diego Cuerda-Gil, Kaushik Panda, Alissa Cullen, Quratulayn Ashraf, Meredith J Sigman, Andrea D McCue, R Keith Slotkin
The RNA Export Factor ALY1 Enables Genome-Wide RNA-Directed DNA Methylation. The Plant cell 31 (4) (2019)
Florian Jupe, Angeline C Rivkin, Todd P Michael, Mark Zander, S Timothy Motley, Justin P Sandoval, R Keith Slotkin, Huaming Chen, Rosa Gomez Castanon, Joseph R Nery, Joseph R Ecker
The complex architecture and epigenomic impact of plant T-DNA insertions. PLoS genetics 15 (1) (2019)
Lexiang Ji, Sandra Marisa Mathioni, Sarah Johnson, Donna Tucker, Adam J Bewick, Kyung Do Kim, Josquin Daron, R Keith Slotkin, Scott A Jackson, Wayne Allen Parrott, Blake C Meyers, Robert J Schmitz
Genome-Wide Reinforcement of DNA Methylation Occurs during Somatic Embryogenesis in Soybean. The Plant cell 31 (10) (2019)
R Keith Slotkin
The case for not masking away repetitive DNA. Mobile DNA 9 (2018)
Josquin Daron, R Keith Slotkin
EpiTEome: Simultaneous detection of transposable element insertion sites and their DNA methylation levels. Genome biology 18 (1) (2017)
Dalen Fultz, R Keith Slotkin
Exogenous Transposable Elements Circumvent Identity-Based Silencing, Permitting the Dissection of Expression-Dependent Silencing. The Plant cell 29 (2) (2017)
Kaushik Panda, Lexiang Ji, Drexel A Neumann, Josquin Daron, Robert J Schmitz, R Keith Slotkin
Full-length autonomous transposable elements are preferentially targeted by expression-dependent forms of RNA-directed DNA methylation. Genome biology 17 (1) (2016)

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Publication Activity (10 Years)

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R Keith Slotkin