Todd P Michael (Todd Michael)

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 43

Top Venues

Nature communications

Plants (Basel, Switzerland)

Genome research

The New phytologist

Salk Institute for Biological Studies

Dartmouth College (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Salk Institute for Biological Studies Apr 03 2020

United States

Research Professor :: Plant Molecular and Cellular Biology Laboratory

J. Craig Venter Institute Jul 01 2017 - Apr 02 2020

United States

Professor, Director of Informatics :: Informatics

Abbott Laboratories Jul 07 2013 - Jul 31 2017

United States

Director, Research Fellow :: Genomics

Monsanto Co Sep 01 2009 - Jul 01 2013

United States

Head, Genome Center :: Biotech

Education History

Dartmouth College

United States

PHD :: Biology

Publications

Crystal M Tomlin, Sitaram Rajaraman, Jeanne Theresa Sebesta, Anne-Cathrine Scheen, Mika Bendiksby, Yee Wen Low, Jarkko Salojärvi, Todd P Michael, Victor A Albert, Charlotte Lindqvist
Allopolyploid origin and diversification of the Hawaiian endemic mints. Nature communications 15 (1) (2024)
Tom Denyer, Pin-Jou Wu, Kelly Colt, Bradley Abramson, Zhili Pang, Pavel Solansky, Allen Mamerto, Tatsuya Nobori, Joseph Ecker, Eric Lam, Todd P Michael, Marja C P Timmermans
Streamlined spatial and environmental expression signatures characterize the minimalist duckweed Wolffia australiana . Genome research (2024)
Tom Denyer, Pin-Jou Wu, Kelly Colt, Bradley W Abramson, Zhili Pang, Pavel Solansky, Allen Mamerto, Tatsuya Nobori, Joseph R Ecker, Eric Lam, Todd P Michael, Marja C P Timmermans
Streamlined spatial and environmental expression signatures characterize the minimalist duckweed Wolffia australiana . Genome research 34 (7) (2024)
Tom Denyer, Pin-Jou Wu, Kelly Colt, Bradley W Abramson, Zhili Pang, Pavel Solansky, Allen Mamerto, Tatsuya Nobori, Joseph R Ecker, Eric Lam, Todd P Michael, Marja C P Timmermans
Streamlined spatial and environmental expression signatures characterize the minimalist duckweed Wolffia australiana . Genome research (2024)
Tom Denyer, Pin-Jou Wu, Kelly Colt, Bradley W Abramson, Zhili Pang, Pavel Solansky, Allen Mamerto, Tatsuya Nobori, Joseph R Ecker, Eric Lam, Todd P Michael, Marja C P Timmermans
Streamlined spatial and environmental expression signatures characterize the minimalist duckweed Wolffia australiana . Genome research 34 (7) (2024)
Crystal M Tomlin, Sitaram Rajaraman, Jeanne Theresa Sebesta, Anne-Cathrine Scheen, Mika Bendiksby, Yee Wen Low, Jarkko Salojärvi, Todd P Michael, Victor A Albert, Charlotte Lindqvist
Allopolyploid origin and diversification of the Hawaiian endemic mints. Nature communications 15 (1) (2024)
Crystal M Tomlin, Sitaram Rajaraman, Jeanne Theresa Sebesta, Anne-Cathrine Scheen, Mika Bendiksby, Yee Wen Low, Jarkko Salojärvi, Todd P Michael, Victor A Albert, Charlotte Lindqvist
Allopolyploid origin and diversification of the Hawaiian endemic mints. Nature communications 15 (1) (2024)
Crystal M Tomlin, Sitaram Rajaraman, Jeanne Theresa Sebesta, Anne-Cathrine Scheen, Mika Bendiksby, Yee Wen Low, Jarkko Salojärvi, Todd P Michael, Victor A Albert, Charlotte Lindqvist
Allopolyploid origin and diversification of the Hawaiian endemic mints. Nature communications 15 (1) (2024)
Kenneth Acosta, Shawn Sorrels, William Chrisler, Weijuan Huang, Sarah Gilbert, Thomas Brinkman, Todd P Michael, Sarah L Lebeis, Eric Lam
Optimization of Molecular Methods for Detecting Duckweed-Associated Bacteria. Plants (Basel, Switzerland) 12 (4) (2023)
Kenneth Acosta, Shawn Sorrels, William Chrisler, Weijuan Huang, Sarah Gilbert, Thomas Brinkman, Todd P Michael, Sarah L Lebeis, Eric Lam
Optimization of Molecular Methods for Detecting Duckweed-Associated Bacteria. Plants (Basel, Switzerland) 12 (4) (2023)
Kenneth Acosta, Shawn Sorrels, William Chrisler, Weijuan Huang, Sarah Gilbert, Thomas Brinkman, Todd P Michael, Sarah L Lebeis, Eric Lam
Optimization of Molecular Methods for Detecting Duckweed-Associated Bacteria. Plants (Basel, Switzerland) 12 (4) (2023)
Kenneth Acosta, Shawn Sorrels, William Chrisler, Weijuan Huang, Sarah Gilbert, Thomas Brinkman, Todd P Michael, Sarah L Lebeis, Eric Lam
Optimization of Molecular Methods for Detecting Duckweed-Associated Bacteria. Plants (Basel, Switzerland) 12 (4) (2023)
Buntora Pasaribu, Kenneth Acosta, Anthony Aylward, Yuanxue Liang, Bradley W Abramson, Kelly Colt, Nolan T Hartwick, John Shanklin, Todd P Michael, Eric Lam
Genomics of turions from the Greater Duckweed reveal its pathways for dormancy and re-emergence strategy. The New phytologist (2023)
Jeremiah J Minich, Malia L Moore, Nicholas A Allsing, Anthony Aylward, Emily R Murray, Loi Tran, Todd P Michael
Generating high-quality plant and fish reference genomes from field-collected specimens by optimizing preservation. Communications biology 6 (1) (2023)
Franziska Saul, Mathias Scharmann, Takanori Wakatake, Sitaram Rajaraman, André Marques, Matthias Freund, Gerhard Bringmann, Louisa Channon, Dirk Becker, Emily Carroll, Yee Wen Low, Charlotte Lindqvist, Kadeem J Gilbert, Tanya Renner, Sachiko Masuda, Michaela Richter, Gerd Vogg, Ken Shirasu, Todd P Michael, Rainer Hedrich, Victor A Albert, Kenji Fukushima
Subgenome dominance shapes novel gene evolution in the decaploid pitcher plant Nepenthes gracilis. Nature plants (2023)
Todd P Michael
Core circadian clock and light signaling genes brought into genetic linkage across the green lineage. Plant physiology 190 (2) (2022)
Todd P Michael
Time of Day Analysis over a Field Grown Developmental Time Course in Rice. Plants (Basel, Switzerland) 12 (1) (2022)
Jeremiah J Minich, Andreas Härer, Joseph Vechinski, Benjamin W Frable, Zachary R Skelton, Emily Kunselman, Michael A Shane, Daniela S Perry, Antonio Gonzalez, Daniel McDonald, Rob Knight, Todd P Michael, Eric E Allen
Host biology, ecology and the environment influence microbial biomass and diversity in 101 marine fish species. Nature communications 13 (1) (2022)
Kenneth Acosta, Klaus-Juergen Appenroth, Ljudmilla Borisjuk, Marvin Edelman, Uwe Heinig, Marcel A K Jansen, Tokitaka Oyama, Buntora Pasaribu, Ingo Schubert, Shawn Sorrels, K Sowjanya Sree, Shuqing Xu, Todd P Michael, Eric Lam
Return of the Lemnaceae: duckweed as a model plant system in the genomics and postgenomics era. The Plant cell 33 (10) (2022)
Joseph Kawash, Kelly Colt, Nolan T Hartwick, Bradley W Abramson, Nicholi Vorsa, James J Polashock, Todd P Michael
Contrasting a reference cranberry genome to a crop wild relative provides insights into adaptation, domestication, and breeding. PloS one 17 (3) (2022)
Todd P Michael
Time of Day Analysis over a Field Grown Developmental Time Course in Rice. Plants (Basel, Switzerland) 12 (1) (2022)
Yee Wen Low, Sitaram Rajaraman, Crystal M Tomlin, Joffre Ali Ahmad, Wisnu H Ardi, Kate Armstrong, Parusuraman Athen, Ahmad Berhaman, Ruth E Bone, Martin Cheek, Nicholas R W Cho, Le Min Choo, Ian D Cowie, Darren M Crayn, Steven J Fleck, Andrew J Ford, Paul I Forster, Deden Girmansyah, David J Goyder, Bruce Gray, Charlie D Heatubun, Ali Ibrahim, Bazilah Ibrahim, Himesh D Jayasinghe, Muhammad Ariffin Kalat, Hashendra S Kathriarachchi, Endang Kintamani, Sin Lan Koh, Joseph T K Lai, Serena M L Lee, Paul K F Leong, Wei Hao Lim, Shawn K Y Lum, Ridha Mahyuni, William J F McDonald, Faizah Metali, Wendy A Mustaqim, Akiyo Naiki, Kang Min Ngo, Matti Niissalo, Subhani Ranasinghe, Rimi Repin, Himmah Rustiami, Victor I Simbiak, Rahayu S Sukri, Siti Sunarti, Liam A Trethowan, Anna Trias-Blasi, Thais N C Vasconcelos, Jimmy F Wanma, Pudji Widodo, Douglas Siril A Wijesundara, Stuart Worboys, Jing Wei Yap, Kien Thai Yong, Gillian S W Khew, Jarkko Salojärvi, Todd P Michael, David J Middleton, David F R P Burslem, Charlotte Lindqvist, Eve J Lucas, Victor A Albert
Genomic insights into rapid speciation within the world's largest tree genus Syzygium. Nature communications 13 (1) (2022)
Erin L Baggs, Meije B Tiersma, Bradley W Abramson, Todd P Michael, Ksenia V Krasileva
Characterization of defense responses against bacterial pathogens in duckweeds lacking EDS1. The New phytologist 236 (5) (2022)
Todd P Michael
Time of Day Analysis over a Field Grown Developmental Time Course in Rice. Plants (Basel, Switzerland) 12 (1) (2022)
Tao Zhang, Michael Mudgett, Ratnala Rambabu, Bradley W Abramson, Xinhua Dai, Todd P Michael, Yunde Zhao
Retraction Note: Selective inheritance of target genes from only one parent of sexually reproduced F1 progeny in Arabidopsis. Nature communications 13 (1) (2022)
Christopher J Grassa, George D Weiblen, Jonathan P Wenger, Clemon Dabney, Shane G Poplawski, S Timothy Motley, Todd P Michael, C J Schwartz
A new Cannabis genome assembly associates elevated cannabidiol (CBD) with hemp introgressed into marijuana. The New phytologist 230 (4) (2021)
Granger G Sutton, Gary B Fogel, Bradley Abramson, Lauren Brinkac, Todd P Michael, Enoch S Liu, Sterling Thomas
Horizontal transfer and evolution of wall teichoic acid gene cassettes in Bacillus subtilis . F1000Research 10 (2021)
Tao Zhang, Michael Mudgett, Ratnala Rambabu, Bradley W Abramson, Xinhua Dai, Todd P Michael, Yunde Zhao
Selective inheritance of target genes from only one parent of sexually reproduced F1 progeny in Arabidopsis. Nature communications 12 (1) (2021)
Granger G Sutton, Gary B Fogel, Bradley Abramson, Lauren Brinkac, Todd P Michael, Enoch S Liu, Sterling Thomas
A pan-genome method to determine core regions of the Bacillus subtilis and Escherichia coli genomes. F1000Research 10 (2021)
Matthew Naish, Michael Alonge, Piotr Wlodzimierz, Andrew J Tock, Bradley W Abramson, Anna Schmücker, Terezie M Mandakova, Bhagyshree Jamge, Christophe Lambing, Pallas C Kuo, Natasha Yelina, Nolan T Hartwick, Kelly Colt, Lisa M Smith, Jurriaan Ton, Tetsuji Kakutani, Robert A Martienssen, Korbinian Schneeberger, Martin A Lysak, Frederic Berger, Alexandros Bousios, Todd P Michael, Michael C Schatz, Ian R Henderson
The genetic and epigenetic landscape of the Arabidopsis centromeres. Science (New York, N.Y.) 374 (6569) (2021)
Granger G Sutton, Gary B Fogel, Bradley Abramson, Lauren Brinkac, Todd P Michael, Enoch S Liu, Sterling Thomas
A pan-genome method to determine core regions of the Bacillus subtilis and Escherichia coli genomes. F1000Research 10 (2021)
David Wickell, Li-Yaung Kuo, Hsiao-Pei Yang, Amra Dhabalia Ashok, Iker Irisarri, Armin Dadras, Sophie de Vries, Jan de Vries, Yao-Moan Huang, Zheng Li, Michael S Barker, Nolan T Hartwick, Todd P Michael, Fay-Wei Li
Underwater CAM photosynthesis elucidated by Isoetes genome. Nature communications 12 (1) (2021)
Jeremiah J Minich, Semar Petrus, Julius D Michael, Todd P Michael, Rob Knight, Eric E Allen
Temporal, Environmental, and Biological Drivers of the Mucosal Microbiome in a Wild Marine Fish, Scomber japonicus. mSphere 5 (3) (2020)
Robert VanBuren, Ching Man Jennifer Wai, Xuewen Wang, Jeremy Pardo, Alan E Yocca, Hao Wang, Srinivasa R Chaluvadi, Guomin Han, Douglas Bryant, Patrick P Edger, Joachim Messing, Mark E Sorrells, Todd C Mockler, Jeffrey L Bennetzen, Todd P Michael
Exceptional subgenome stability and functional divergence in the allotetraploid Ethiopian cereal teff. Nature communications 11 (1) (2020)
Kirk J-M MacKinnon, Benjamin J Cole, Chang Yu, Joshua H Coomey, Nolan T Hartwick, Marie-Stanislas Remigereau, Tomás Duffy, Todd P Michael, Steve A Kay, Samuel P Hazen
Changes in ambient temperature are the prevailing cue in determining Brachypodium distachyon diurnal gene regulation. The New phytologist 227 (6) (2020)
Todd P Michael, Evan Ernst, Nolan Hartwick, Philomena Chu, Douglas Bryant, Sarah Gilbert, Stefan Ortleb, Erin L Baggs, K Sowjanya Sree, Klaus-Juergen Appenroth, Joerg Fuchs, Florian Jupe, Justin P Sandoval, Ksenia V Krasileva, Ljudmilla Borisjuk, Todd C Mockler, Joseph R Ecker, Robert A Martienssen, Eric Lam
Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control. Genome research (2020)
Jonathan R Chekan, Shaun M K McKinnie, Malia L Moore, Shane G Poplawski, Todd P Michael, Bradley S Moore
Scalable Biosynthesis of the Seaweed Neurochemical, Kainic Acid. Angewandte Chemie (International ed. in English) 58 (25) (2019)
Jeffrey P Mower, Peng-Fei Ma, Felix Grewe, Alex Taylor, Todd P Michael, Robert VanBuren, Yin-Long Qiu
Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat. The New phytologist 222 (2) (2019)
Ching Man Wai, Sean E Weise, Philip Ozersky, Todd C Mockler, Todd P Michael, Robert VanBuren
Time of day and network reprogramming during drought induced CAM photosynthesis in Sedum album. PLoS genetics 15 (6) (2019)
Florian Jupe, Angeline C Rivkin, Todd P Michael, Mark Zander, S Timothy Motley, Justin P Sandoval, R Keith Slotkin, Huaming Chen, Rosa Gomez Castanon, Joseph R Nery, Joseph R Ecker
The complex architecture and epigenomic impact of plant T-DNA insertions. PLoS genetics 15 (1) (2019)
Saura Rodrigues da Silva, Ana Paula Moraes, Helen A Penha, Maria H M Julião, Douglas S Domingues, Todd P Michael, Vitor Fernandes Oliveira Miranda, Alessandro de Mello Varani
The Terrestrial Carnivorous Plant Utricularia reniformis Sheds Light on Environmental and Life-Form Genome Plasticity. International journal of molecular sciences 21 (1) (2019)
Todd P Michael, Florian Jupe, Felix Bemm, S Timothy Motley, Justin P Sandoval, Christa Lanz, Olivier Loudet, Detlef Weigel, Joseph R Ecker
High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell. Nature communications 9 (1) (2018)
Robert VanBuren, Ching Man Wai, Shujun Ou, Jeremy Pardo, Doug Bryant, Ning Jiang, Todd C Mockler, Patrick Edger, Todd P Michael
Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla. Nature communications 9 (1) (2018)

Todd P Michael.css-eqlu8i{font-size:small;padding-left:4px;} (Todd Michael)

Publication Activity (10 Years)

Top Topics

Top Venues

Todd P Michael (Todd Michael)