Ralph Jimenez

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 26

Top Topics

Molecular Dynamics Simulations

Energy Transfer

Top Venues

The journal of physical chemistry. B

The journal of physical chemistry letters

Analytical chemistry

Physical chemistry chemical physics : PCCP

This page only lists publications with an associated author ORCID identifier.

Publications

Atsushi Yabushita, Chia-Yun Cheng, Ying Kuan Ko, Takayoshi Kobayashi, Izumi Iwakura, Ralph Jimenez
Excited State Vibrational Dynamics Reveals a Photocycle That Enhances the Photostability of the TagRFP-T Fluorescent Protein. The journal of physical chemistry. B 128 (5) (2024)
Atsushi Yabushita, Chia-Yun Cheng, Ying Kuan Ko, Takayoshi Kobayashi, Izumi Iwakura, Ralph Jimenez
Excited State Vibrational Dynamics Reveals a Photocycle That Enhances the Photostability of the TagRFP-T Fluorescent Protein. The journal of physical chemistry. B 128 (5) (2024)
Atsushi Yabushita, Chia-Yun Cheng, Ying Kuan Ko, Takayoshi Kobayashi, Izumi Iwakura, Ralph Jimenez
Excited State Vibrational Dynamics Reveals a Photocycle That Enhances the Photostability of the TagRFP-T Fluorescent Protein. The journal of physical chemistry. B (2024)
Srijit Mukherjee, Nancy Douglas, Ralph Jimenez
Influence of Fluorescence Lifetime Selections and Conformational Flexibility on Brightness of FusionRed Variants. The journal of physical chemistry letters 15 (6) (2024)
Srijit Mukherjee, Nancy Douglas, Ralph Jimenez
Influence of Fluorescence Lifetime Selections and Conformational Flexibility on Brightness of FusionRed Variants. The journal of physical chemistry letters (2024)
Srijit Mukherjee, Nancy Douglas, Ralph Jimenez
Influence of Fluorescence Lifetime Selections and Conformational Flexibility on Brightness of FusionRed Variants. The journal of physical chemistry letters 15 (6) (2024)
Atsushi Yabushita, Chia-Yun Cheng, Ying Kuan Ko, Takayoshi Kobayashi, Izumi Iwakura, Ralph Jimenez
Excited State Vibrational Dynamics Reveals a Photocycle That Enhances the Photostability of the TagRFP-T Fluorescent Protein. The journal of physical chemistry. B 128 (5) (2024)
Atsushi Yabushita, Chia-Yun Cheng, Ying Kuan Ko, Takayoshi Kobayashi, Izumi Iwakura, Ralph Jimenez
Excited State Vibrational Dynamics Reveals a Photocycle That Enhances the Photostability of the TagRFP-T Fluorescent Protein. The journal of physical chemistry. B 128 (5) (2024)
Srijit Mukherjee, Premashis Manna, Nancy Douglas, Prem P Chapagain, Ralph Jimenez
Conformational Dynamics of mCherry Variants: A Link between Side-Chain Motions and Fluorescence Brightness. The journal of physical chemistry. B 127 (1) (2022)
Srijit Mukherjee, Premashis Manna, Nancy Douglas, Prem P Chapagain, Ralph Jimenez
Conformational Dynamics of mCherry Variants: A Link between Side-Chain Motions and Fluorescence Brightness. The journal of physical chemistry. B 127 (1) (2022)
Srijit Mukherjee, Premashis Manna, Nancy Douglas, Prem P Chapagain, Ralph Jimenez
Conformational Dynamics of mCherry Variants: A Link between Side-Chain Motions and Fluorescence Brightness. The journal of physical chemistry. B (2022)
Srijit Mukherjee, Ralph Jimenez
Photophysical Engineering of Fluorescent Proteins: Accomplishments and Challenges of Physical Chemistry Strategies. The journal of physical chemistry. B 126 (4) (2022)
Taecheon Lyu, So Hyeong Sohn, Ralph Jimenez, Taiha Joo
Temperature-Dependent Fluorescence of mPlum Fluorescent Protein from 295 to 20 K. The journal of physical chemistry. B 126 (12) (2022)
Srijit Mukherjee, Premashis Manna, Sheng-Ting Hung, Felix Vietmeyer, Pia Friis, Amy E Palmer, Ralph Jimenez
Directed Evolution of a Bright Variant of mCherry: Suppression of Nonradiative Decay by Fluorescence Lifetime Selections. The journal of physical chemistry. B 126 (25) (2022)
Srijit Mukherjee, Premashis Manna, Nancy Douglas, Prem P Chapagain, Ralph Jimenez
Conformational Dynamics of mCherry Variants: A Link between Side-Chain Motions and Fluorescence Brightness. The journal of physical chemistry. B 127 (1) (2022)
Srijit Mukherjee, Connor Thomas, Ryan Wilson, Emma Simmerman, Sheng-Ting Hung, Ralph Jimenez
Characterizing dark state kinetics and single molecule fluorescence of FusionRed and FusionRed-MQ at low irradiances. Physical chemistry chemical physics : PCCP 24 (23) (2022)
Alexander Mikhaylov, Ryan N Wilson, Kristen M Parzuchowski, Michael D Mazurek, Charles H Camp, Martin J Stevens, Ralph Jimenez
Hot-Band Absorption Can Mimic Entangled Two-Photon Absorption. The journal of physical chemistry letters 13 (6) (2022)
Daniel J Lum, Michael D Mazurek, Alexander Mikhaylov, Kristen M Parzuchowski, Ryan N Wilson, Ralph Jimenez, Thomas Gerrits, Martin J Stevens, Marcus T Cicerone, Charles H Camp
Witnessing the survival of time-energy entanglement through biological tissue and scattering media. Biomedical optics express 12 (6) (2021)
Sheng-Ting Hung, Srijit Mukherjee, Ralph Jimenez
Enrichment of rare events using a multi-parameter high throughput microfluidic droplet sorter. Lab on a chip 20 (4) (2020)
Srijit Mukherjee, Sheng-Ting Hung, Nancy Douglas, Premashis Manna, Connor Thomas, Annika Ekrem, Amy E Palmer, Ralph Jimenez
Engineering of a Brighter Variant of the FusionRed Fluorescent Protein Using Lifetime Flow Cytometry and Structure-Guided Mutations. Biochemistry 59 (39) (2020)
Joshua D Slocum, Amy E Palmer, Ralph Jimenez
Intramolecular Fluorescent Protein Association in a Class of Zinc FRET Sensors Leads to Increased Dynamic Range. The journal of physical chemistry. B 123 (14) (2019)
Esther Braselmann, Aleksandra J Wierzba, Jacob T Polaski, Mikołaj Chromiński, Zachariah E Holmes, Sheng-Ting Hung, Dilara Batan, Joshua R Wheeler, Roy Parker, Ralph Jimenez, Dorota Gryko, Robert T Batey, Amy E Palmer
A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells. Nature chemical biology 14 (10) (2018)
Gary C H Mo, Brian Ross, Fabian Hertel, Premashis Manna, Xinxing Yang, Eric Greenwald, Chris Booth, Ashlee M Plummer, Brian Tenner, Zan Chen, Yuxiao Wang, Eileen J Kennedy, Philip A Cole, Karen G Fleming, Amy Palmer, Ralph Jimenez, Jie Xiao, Peter Dedecker, Jin Zhang
Genetically encoded biosensors for visualizing live-cell biochemical activity at super-resolution. Nature methods 14 (4) (2017)
Galen C O'Neil, Luis Miaja-Avila, Young Il Joe, Bradley K Alpert, Mahalingam Balasubramanian, D M Sagar, William Doriese, Joseph W Fowler, Wilfred K Fullagar, Ning Chen, Gene C Hilton, Ralph Jimenez, Bruce Ravel, Carl D Reintsema, Dan R Schmidt, Kevin L Silverman, Daniel S Swetz, Jens Uhlig, Joel N Ullom
Ultrafast Time-Resolved X-ray Absorption Spectroscopy of Ferrioxalate Photolysis with a Laser Plasma X-ray Source and Microcalorimeter Array. The journal of physical chemistry letters 8 (5) (2017)
Kyle P Carter, Margaret C Carpenter, Brett L Fiedler, Ralph Jimenez, Amy E Palmer
Critical Comparison of FRET-Sensor Functionality in the Cytosol and Endoplasmic Reticulum and Implications for Quantification of Ions. Analytical chemistry 89 (17) (2017)
Brett L Fiedler, Steven Van Buskirk, Kyle P Carter, Yan Qin, Margaret C Carpenter, Amy E Palmer, Ralph Jimenez
Droplet Microfluidic Flow Cytometer For Sorting On Transient Cellular Responses Of Genetically-Encoded Sensors. Analytical chemistry 89 (1) (2016)