Ronald R Breaker

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 50

Top Venues

Nucleic acids research

RNA (New York, N.Y.)

ACS chemical biology

Proceedings of the National Academy of Sciences of the United States of America

Howard Hughes Medical Institute

Purdue University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Howard Hughes Medical Institute

United States

HHMI INvestigator

Howard Hughes Medical Institute

United States

HHMI INvestigator

Yale University

United States

Professor :: Biology; MCDB; MB&B

Education History

Purdue University

United States

PHD :: Biology

University of Wisconsin Stevens Point

United States

BSC :: Biology; Chemistry

Publications

Chrishan M Fernando, Ronald R Breaker
Bioinformatic prediction of proteins relevant to functions of the bacterial OLE ribonucleoprotein complex. mSphere 9 (6) (2024)
Lucas W Soares, Christopher G King, Chrishan M Fernando, Adam Roth, Ronald R Breaker
Genetic disruption of the bacterial raiA motif noncoding RNA causes defects in sporulation and aggregation. Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Engineered Branaplam Aptamers Exploit Structural Elements from Natural Riboswitches. ACS chemical biology 19 (7) (2024)
Aya Narunsky, Gadareth A Higgs, Blake M Torres, Diane Yu, Gabriel Belem de Andrade, Kumari Kavita, Ronald R Breaker
The discovery of novel noncoding RNAs in 50 bacterial genomes. Nucleic acids research 52 (9) (2024)
Lucas W Soares, Christopher G King, Chrishan M Fernando, Adam Roth, Ronald R Breaker
Genetic disruption of the bacterial raiA motif noncoding RNA causes defects in sporulation and aggregation. Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Lucas W Soares, Christopher G King, Chrishan M Fernando, Adam Roth, Ronald R Breaker
Genetic disruption of the bacterial raiA motif noncoding RNA causes defects in sporulation and aggregation. Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Lucas W Soares, Christopher G King, Chrishan M Fernando, Adam Roth, Ronald R Breaker
Genetic disruption of the bacterial raiA motif noncoding RNA causes defects in sporulation and aggregation. Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Engineered Branaplam Aptamers Exploit Structural Elements from Natural Riboswitches. ACS chemical biology (2024)
Aya Narunsky, Gadareth A Higgs, Blake M Torres, Diane Yu, Gabriel Belem de Andrade, Kumari Kavita, Ronald R Breaker
The discovery of novel noncoding RNAs in 50 bacterial genomes. Nucleic acids research 52 (9) (2024)
Chrishan M Fernando, Ronald R Breaker
Bioinformatic prediction of proteins relevant to functions of the bacterial OLE ribonucleoprotein complex. mSphere 9 (6) (2024)
Seth E Lyon, Freya D R Wencker, Chrishan M Fernando, Kimberly A Harris, Ronald R Breaker
Disruption of the bacterial OLE RNP complex impairs growth on alternative carbon sources. PNAS nexus 3 (2) (2024)
Aya Narunsky, Gadareth A Higgs, Blake M Torres, Diane Yu, Gabriel Belem de Andrade, Kumari Kavita, Ronald R Breaker
The discovery of novel noncoding RNAs in 50 bacterial genomes. Nucleic acids research 52 (9) (2024)
Aya Narunsky, Gadareth A Higgs, Blake M Torres, Diane Yu, Gabriel Belem de Andrade, Kumari Kavita, Ronald R Breaker
The discovery of novel noncoding RNAs in 50 bacterial genomes. Nucleic acids research (2024)
Chrishan M Fernando, Ronald R Breaker
Bioinformatic prediction of proteins relevant to functions of the bacterial OLE ribonucleoprotein complex. mSphere (2024)
Seth E Lyon, Freya D R Wencker, Chrishan M Fernando, Kimberly A Harris, Ronald R Breaker
Disruption of the bacterial OLE RNP complex impairs growth on alternative carbon sources. PNAS nexus 3 (2) (2024)
Lucas W Soares, Christopher G King, Chrishan M Fernando, Adam Roth, Ronald R Breaker
Genetic disruption of the bacterial raiA motif noncoding RNA causes defects in sporulation and aggregation. Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Engineered Branaplam Aptamers Exploit Structural Elements from Natural Riboswitches. ACS chemical biology 19 (7) (2024)
Aya Narunsky, Gadareth A Higgs, Blake M Torres, Diane Yu, Gabriel Belem de Andrade, Kumari Kavita, Ronald R Breaker
The discovery of novel noncoding RNAs in 50 bacterial genomes. Nucleic acids research 52 (9) (2024)
Chrishan M Fernando, Ronald R Breaker
Bioinformatic prediction of proteins relevant to functions of the bacterial OLE ribonucleoprotein complex. mSphere 9 (6) (2024)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Engineered Branaplam Aptamers Exploit Structural Elements from Natural Riboswitches. ACS chemical biology 19 (7) (2024)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Exploiting natural riboswitches for aptamer engineering and validation. Nucleic acids research 51 (2) (2023)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Exploiting natural riboswitches for aptamer engineering and validation. Nucleic acids research (2023)
Ronald R Breaker, Kimberly A Harris, Seth E Lyon, Freya D R Wencker, Chrishan M Fernando
Evidence that OLE RNA is a component of a major stress-responsive ribonucleoprotein particle in extremophilic bacteria. Molecular microbiology (2023)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Exploiting natural riboswitches for aptamer engineering and validation. Nucleic acids research 51 (2) (2023)
Michael G Mohsen, Matthew K Midy, Aparaajita Balaji, Ronald R Breaker
Exploiting natural riboswitches for aptamer engineering and validation. Nucleic acids research 51 (2) (2023)
Neil White, Harini Sadeeshkumar, Anna Sun, Narasimhan Sudarsan, Ronald R Breaker
Na + riboswitches regulate genes for diverse physiological processes in bacteria. Nature chemical biology 18 (8) (2022)
Madeline E Sherlock, Gadareth Higgs, Diane Yu, Danielle L Widner, Neil A White, Narasimhan Sudarsan, Harini Sadeeshkumar, Kevin R Perkins, Gayan Mirihana Arachchilage, Sarah N Malkowski, Christopher G King, Kimberly A Harris, Glenn Gaffield, Ruben M Atilho, Ronald R Breaker
Architectures and complex functions of tandem riboswitches. RNA biology 19 (1) (2022)
Ronald R Breaker
The Biochemical Landscape of Riboswitch Ligands. Biochemistry 61 (3) (2022)
Shanker S S Panchapakesan, Ronald R Breaker
The case of the missing allosteric ribozymes. Nature chemical biology 17 (4) (2021)
Kenneth I Brewer, Etienne B Greenlee, Gadareth Higgs, Diane Yu, Gayan Mirihana Arachchilage, Xi Chen, Nicholas King, Neil White, Ronald R Breaker
Comprehensive discovery of novel structured noncoding RNAs in 26 bacterial genomes. RNA biology 18 (12) (2021)
Xavier Portillo, Yu-Ting Huang, Ronald R Breaker, David P Horning, Gerald F Joyce
Witnessing the structural evolution of an RNA enzyme. eLife 10 (2021)
Ronald R Breaker
Imaginary Ribozymes. ACS chemical biology 15 (8) (2020)
Hubert Salvail, Aparaajita Balaji, Diane Yu, Adam Roth, Ronald R Breaker
Biochemical Validation of a Fourth Guanidine Riboswitch Class in Bacteria. Biochemistry 59 (49) (2020)
Madeline E Sherlock, Ronald R Breaker
Former orphan riboswitches reveal unexplored areas of bacterial metabolism, signaling, and gene control processes. RNA (New York, N.Y.) 26 (6) (2020)
Diane Yu, Ronald R Breaker
A bacterial riboswitch class senses xanthine and uric acid to regulate genes associated with purine oxidation. RNA (New York, N.Y.) 26 (8) (2020)
Sarah N Malkowski, Ruben M Atilho, Etienne B Greenlee, Christina E Weinberg, Ronald R Breaker
A rare bacterial RNA motif is implicated in the regulation of the purF gene whose encoded enzyme synthesizes phosphoribosylamine. RNA (New York, N.Y.) 26 (12) (2020)
Shanker S S Panchapakesan, Lukas Corey, Sarah N Malkowski, Gadareth Higgs, Ronald R Breaker
A second riboswitch class for the enzyme cofactor NAD. RNA (New York, N.Y.) 27 (1) (2020)
Ruben M Atilho, Gayan Mirihana Arachchilage, Etienne B Greenlee, Kirsten M Knecht, Ronald R Breaker
A bacterial riboswitch class for the thiamin precursor HMP-PP employs a terminator-embedded aptamer. eLife 8 (2019)
Kevin R Perkins, Ruben M Atilho, Michelle H Moon, Ronald R Breaker
Employing a ZTP Riboswitch to Detect Bacterial Folate Biosynthesis Inhibitors in a Small Molecule High-Throughput Screen. ACS chemical biology 14 (12) (2019)
Kimberly A Harris, Nicole B Odzer, Ronald R Breaker
Disruption of the OLE ribonucleoprotein complex causes magnesium toxicity in Bacillus halodurans. Molecular microbiology 112 (5) (2019)
Sarah N Malkowski, Tara C J Spencer, Ronald R Breaker
Evidence that the nadA motif is a bacterial riboswitch for the ubiquitous enzyme cofactor NAD. RNA (New York, N.Y.) 25 (12) (2019)
Xi Dawn Chen, Gayan Mirihana Arachchilage, Ronald R Breaker
Biochemical validation of a second class of tetrahydrofolate riboswitches in bacteria. RNA (New York, N.Y.) 25 (9) (2019)
Madeline E Sherlock, Narasimhan Sudarsan, Shira Stav, Ronald R Breaker
Tandem riboswitches form a natural Boolean logic gate to control purine metabolism in bacteria. eLife 7 (2018)
Etienne B Greenlee, Shira Stav, Ruben M Atilho, Kenneth I Brewer, Kimberly A Harris, Sarah N Malkowski, Gayan Mirihana Arachchilage, Kevin R Perkins, Madeline E Sherlock, Ronald R Breaker
Challenges of ligand identification for the second wave of orphan riboswitch candidates. RNA biology 15 (3) (2018)
Madeline E Sherlock, Harini Sadeeshkumar, Ronald R Breaker
Variant Bacterial Riboswitches Associated with Nucleotide Hydrolase Genes Sense Nucleoside Diphosphates. Biochemistry 58 (5) (2018)
Gayan Mirihana Arachchilage, Madeline E Sherlock, Zasha Weinberg, Ronald R Breaker
SAM-VI RNAs selectively bind S-adenosylmethionine and exhibit similarities to SAM-III riboswitches. RNA biology 15 (3) (2018)
James W Nelson, Ronald R Breaker
The lost language of the RNA World. Science signaling 10 (483) (2017)
Phillip J McCown, Keith A Corbino, Shira Stav, Madeline E Sherlock, Ronald R Breaker
Riboswitch diversity and distribution. RNA (New York, N.Y.) 23 (7) (2017)
Sanshu Li, Ronald R Breaker
Identification of 15 candidate structured noncoding RNA motifs in fungi by comparative genomics. BMC genomics 18 (1) (2017)
Ronald R Breaker
Mechanistic Debris Generated by Twister Ribozymes. ACS chemical biology 12 (4) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Ronald R Breaker