Sarah Auburn

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 24

Top Venues

PLoS neglected tropical diseases

Nature communications

Communications biology

PLoS medicine

Menzies School of Health Research

University of Oxford (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Menzies School of Health Research Mar 16 2010

Australia

Senior Research Officer :: Global and Tropical Health Division

Wellcome Trust Sanger Institute Mar 30 2007 - Mar 01 2010

United Kingdom

Research Associate :: Malaria Programme

Education History

University of Oxford Sep 01 2003 - Apr 01 2007

United Kingdom

PHD :: Paediatrics

Publications

Sasha V Siegel, Hidayat Trimarsanto, Roberto Amato, Kathryn Murie, Aimee R Taylor, Edwin Sutanto, Mariana Kleinecke, Georgia Whitton, James A Watson, Mallika Imwong, Ashenafi Assefa, Awab Ghulam Rahim, Hoang Chau Nguyen, Tinh Hien Tran, Justin A Green, Gavin C K W Koh, Nicholas J White, Nicholas Day, Dominic P Kwiatkowski, Julian C Rayner, Richard N Price, Sarah Auburn
Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites. Nature communications 15 (1) (2024)
Sasha V Siegel, Hidayat Trimarsanto, Roberto Amato, Kathryn Murie, Aimee R Taylor, Edwin Sutanto, Mariana Kleinecke, Georgia Whitton, James A Watson, Mallika Imwong, Ashenafi Assefa, Awab Ghulam Rahim, Hoang Chau Nguyen, Tinh Hien Tran, Justin A Green, Gavin C K W Koh, Nicholas J White, Nicholas Day, Dominic P Kwiatkowski, Julian C Rayner, Richard N Price, Sarah Auburn
Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites. Nature communications 15 (1) (2024)
Sasha V Siegel, Hidayat Trimarsanto, Roberto Amato, Kathryn Murie, Aimee R Taylor, Edwin Sutanto, Mariana Kleinecke, Georgia Whitton, James A Watson, Mallika Imwong, Ashenafi Assefa, Awab Ghulam Rahim, Hoang Chau Nguyen, Tinh Hien Tran, Justin A Green, Gavin C K W Koh, Nicholas J White, Nicholas Day, Dominic P Kwiatkowski, Julian C Rayner, Richard N Price, Sarah Auburn
Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites. Nature communications 15 (1) (2024)
Sasha V Siegel, Hidayat Trimarsanto, Roberto Amato, Kathryn Murie, Aimee R Taylor, Edwin Sutanto, Mariana Kleinecke, Georgia Whitton, James A Watson, Mallika Imwong, Ashenafi Assefa, Awab Ghulam Rahim, Hoang Chau Nguyen, Tinh Hien Tran, Justin A Green, Gavin C K W Koh, Nicholas J White, Nicholas Day, Dominic P Kwiatkowski, Julian C Rayner, Richard N Price, Sarah Auburn
Lineage-informative microhaplotypes for recurrence classification and spatio-temporal surveillance of Plasmodium vivax malaria parasites. Nature communications 15 (1) (2024)
Angela Rumaseb, Roberto R Moraes Barros, Juliana M Sá, Jonathan J Juliano, Timothy William, Kamil A Braima, Bridget E Barber, Nicholas M Anstey, Ric N Price, Matthew J Grigg, Jutta Marfurt, Sarah Auburn
No Association between the Plasmodium vivax crt-o MS334 or In9 pvcrt Polymorphisms and Chloroquine Failure in a Pre-Elimination Clinical Cohort from Malaysia with a Large Clonal Expansion. Antimicrobial agents and chemotherapy (2023)
Sasha V Siegel, Roberto Amato, Hidayat Trimarsanto, Edwin Sutanto, Mariana Kleinecke, Kathryn Murie, Georgia Whitton, Aimee R Taylor, James A Watson, Mallika Imwong, Ashenafi Assefa, Awab Ghulam Rahim, Nguyen Hoang Chau, Tran Tinh Hien, Justin A Green, Gavin Koh, Nicholas J White, Nicholas Day, Dominic P Kwiatkowski, Julian C Rayner, Richard N Price, Sarah Auburn
Lineage-informative microhaplotypes for spatio-temporal surveillance of Plasmodium vivax malaria parasites. medRxiv : the preprint server for health sciences (2023)
Sarah Auburn
Unveiling the genomic landscape of malaria in natural infections. Nature reviews. Microbiology 21 (10) (2023)
Hidayat Trimarsanto, Roberto Amato, Richard D Pearson, Edwin Sutanto, Rintis Noviyanti, Leily Trianty, Jutta Marfurt, Zuleima Pava, Diego F Echeverry, Tatiana M Lopera-Mesa, Lidia M Montenegro, Alberto Tobón Castaño, Matthew J Grigg, Bridget Barber, Timothy William, Nicholas M Anstey, Sisay Getachew, Beyene Petros, Abraham Aseffa, Ashenafi Assefa, Awab G Rahim, Nguyen H Chau, Tran T Hien, Mohammad Shafiul Alam, Wasif Ali Khan, Benedikt Ley, Kamala Thriemer, Sonam Wangchuck, Yaghoob Hamedi, Ishag Adam, Yaobao Liu, Qi Gao, Kanlaya Sriprawat, Marcelo U Ferreira, Moses Laman, Alyssa Barry, Ivo Mueller, Marcus Vinícius Guimarães de Lacerda, Alejandro Llanos-Cuentas, Srivicha Krudsood, Chanthap Lon, Rezika Mohammed, Daniel Yilma, Dhelio Batista Pereira, Fe Esperanza Espino, Cindy S Chu, Iván D Vélez, Chayadol Namaik-Larp, Maria F Villegas, Justin A Green, Gavin C K W Koh, Julian C Rayner, Eleanor Drury, Sónia Gonçalves, Victoria Simpson, Olivo Miotto, Alistair Miles, Nicholas J White, Francois H Nosten, Dominic P Kwiatkowski, Richard N Price, Sarah Auburn
A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria. Communications biology 5 (1) (2022)
Hidayat Trimarsanto, Roberto Amato, Richard D Pearson, Edwin Sutanto, Rintis Noviyanti, Leily Trianty, Jutta Marfurt, Zuleima Pava, Diego F Echeverry, Tatiana M Lopera-Mesa, Lidia M Montenegro, Alberto Tobón Castaño, Matthew J Grigg, Bridget Barber, Timothy William, Nicholas M Anstey, Sisay Getachew, Beyene Petros, Abraham Aseffa, Ashenafi Assefa, Awab G Rahim, Nguyen H Chau, Tran T Hien, Mohammad Shafiul Alam, Wasif Ali Khan, Benedikt Ley, Kamala Thriemer, Sonam Wangchuck, Yaghoob Hamedi, Ishag Adam, Yaobao Liu, Qi Gao, Kanlaya Sriprawat, Marcelo U Ferreira, Moses Laman, Alyssa Barry, Ivo Mueller, Marcus Vinícius Guimarães de Lacerda, Alejandro Llanos-Cuentas, Srivicha Krudsood, Chanthap Lon, Rezika Mohammed, Daniel Yilma, Dhelio Batista Pereira, Fe Esperanza Espino, Cindy S Chu, Iván D Vélez, Chayadol Namaik-Larp, Maria F Villegas, Justin A Green, Gavin C K W Koh, Julian C Rayner, Eleanor Drury, Sónia Gonçalves, Victoria Simpson, Olivo Miotto, Alistair Miles, Nicholas J White, Francois H Nosten, Dominic P Kwiatkowski, Richard N Price, Sarah Auburn
A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria. Communications biology 5 (1) (2022)
Ji-Hoon Park, Min-Hee Kim, Edwin Sutanto, Seok-Won Na, Min-Jae Kim, Joon Sup Yeom, Myat Htut Nyunt, Mohammed Mohieldien Abbas Elfaki, Muzamil Mahdi Abdel Hamid, Seok Ho Cha, Sisay Getachew Alemu, Kanlaya Sriprawat, Nicholas M Anstey, Matthew J Grigg, Bridget E Barber, Timothy William, Qi Gao, Yaobao Liu, Richard D Pearson, Richard N Price, Francois Nosten, Sung-Il Yoon, Joo Hwan No, Eun-Taek Han, Sarah Auburn, Bruce Russell, Jin-Hee Han
Geographical distribution and genetic diversity of Plasmodium vivax reticulocyte binding protein 1a correlates with patient antigenicity. PLoS neglected tropical diseases 16 (6) (2022)
Hidayat Trimarsanto, Roberto Amato, Richard D Pearson, Edwin Sutanto, Rintis Noviyanti, Leily Trianty, Jutta Marfurt, Zuleima Pava, Diego F Echeverry, Tatiana M Lopera-Mesa, Lidia M Montenegro, Alberto Tobón Castaño, Matthew J Grigg, Bridget Barber, Timothy William, Nicholas M Anstey, Sisay Getachew, Beyene Petros, Abraham Aseffa, Ashenafi Assefa, Awab G Rahim, Nguyen H Chau, Tran T Hien, Mohammad Shafiul Alam, Wasif Ali Khan, Benedikt Ley, Kamala Thriemer, Sonam Wangchuck, Yaghoob Hamedi, Ishag Adam, Yaobao Liu, Qi Gao, Kanlaya Sriprawat, Marcelo U Ferreira, Moses Laman, Alyssa Barry, Ivo Mueller, Marcus Vinícius Guimarães de Lacerda, Alejandro Llanos-Cuentas, Srivicha Krudsood, Chanthap Lon, Rezika Mohammed, Daniel Yilma, Dhelio Batista Pereira, Fe Esperanza Espino, Cindy S Chu, Iván D Vélez, Chayadol Namaik-Larp, Maria F Villegas, Justin A Green, Gavin C K W Koh, Julian C Rayner, Eleanor Drury, Sónia Gonçalves, Victoria Simpson, Olivo Miotto, Alistair Miles, Nicholas J White, Francois H Nosten, Dominic P Kwiatkowski, Richard N Price, Sarah Auburn
A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria. Communications biology 5 (1) (2022)
Hidayat Trimarsanto, Roberto Amato, Richard D Pearson, Edwin Sutanto, Rintis Noviyanti, Leily Trianty, Jutta Marfurt, Zuleima Pava, Diego F Echeverry, Tatiana M Lopera-Mesa, Lidia M Montenegro, Alberto Tobón Castaño, Matthew J Grigg, Bridget Barber, Timothy William, Nicholas M Anstey, Sisay Getachew, Beyene Petros, Abraham Aseffa, Ashenafi Assefa, Awab G Rahim, Nguyen H Chau, Tran T Hien, Mohammad Shafiul Alam, Wasif Ali Khan, Benedikt Ley, Kamala Thriemer, Sonam Wangchuck, Yaghoob Hamedi, Ishag Adam, Yaobao Liu, Qi Gao, Kanlaya Sriprawat, Marcelo U Ferreira, Moses Laman, Alyssa Barry, Ivo Mueller, Marcus Vinícius Guimarães de Lacerda, Alejandro Llanos-Cuentas, Srivicha Krudsood, Chanthap Lon, Rezika Mohammed, Daniel Yilma, Dhelio Batista Pereira, Fe Esperanza Espino, Cindy S Chu, Iván D Vélez, Chayadol Namaik-Larp, Maria F Villegas, Justin A Green, Gavin C K W Koh, Julian C Rayner, Eleanor Drury, Sónia Gonçalves, Victoria Simpson, Olivo Miotto, Alistair Miles, Nicholas J White, Francois H Nosten, Dominic P Kwiatkowski, Richard N Price, Sarah Auburn
A molecular barcode and web-based data analysis tool to identify imported Plasmodium vivax malaria. Communications biology 5 (1) (2022)
Benedikt Ley, Mohammad Shafiul Alam, Mohammad Golam Kibria, Jutta Marfurt, Ching Swe Phru, Jenifar Quaiyum Ami, Kamala Thriemer, Sarah Auburn, Nusrat Jahan, Fatema Tuj Johora, Mohammad Sharif Hossain, Cristian Koepfli, Wasif Ali Khan, Richard N Price
Glucose-6-phosphate dehydrogenase activity in individuals with and without malaria: Analysis of clinical trial, cross-sectional and case-control data from Bangladesh. PLoS medicine 18 (4) (2021)
Sarah Auburn, Qin Cheng, Jutta Marfurt, Richard N Price
The changing epidemiology of Plasmodium vivax: Insights from conventional and novel surveillance tools. PLoS medicine 18 (4) (2021)
Rintis Noviyanti, Olivo Miotto, Alyssa Barry, Jutta Marfurt, Sasha Siegel, Nguyen Thuy-Nhien, Huynh Hong Quang, Nancy Dian Anggraeni, Ferdinand Laihad, Yaobao Liu, Maria Endang Sumiwi, Hidayat Trimarsanto, Farah Coutrier, Nadia Fadila, Najia Ghanchi, Fatema Tuj Johora, Agatha Mia Puspitasari, Livingstone Tavul, Leily Trianty, Retno Ayu Setya Utami, Duoquan Wang, Kesang Wangchuck, Ric N Price, Sarah Auburn
Implementing parasite genotyping into national surveillance frameworks: feedback from control programmes and researchers in the Asia-Pacific region. Malaria journal 19 (1) (2020)
Zuleima Pava, Agatha M Puspitasari, Angela Rumaseb, Irene Handayuni, Leily Trianty, Retno A S Utami, Yusrifar Kharisma Tirta, Faustina Burdam, Enny Kenangalem, Grennady Wirjanata, Steven Kho, Hidayat Trimarsanto, Nicholas M Anstey, Jeanne Rini Poespoprodjo, Rintis Noviyanti, Richard N Price, Jutta Marfurt, Sarah Auburn
Molecular surveillance over 14 years confirms reduction of Plasmodium vivax and falciparum transmission after implementation of Artemisinin-based combination therapy in Papua, Indonesia. PLoS neglected tropical diseases 14 (5) (2020)
Anthony Ford, Daniel Kepple, Beka Raya Abagero, Jordan Connors, Richard D Pearson, Sarah Auburn, Sisay Getachew, Colby T Ford, Karthigayan Gunalan, Louis H Miller, Daniel A Janies, Julian C Rayner, Guiyun Yan, Delenasaw Yewhalaw, Eugenia Lo
Whole genome sequencing of Plasmodium vivax isolates reveals frequent sequence and structural polymorphisms in erythrocyte binding genes. PLoS neglected tropical diseases 14 (10) (2020)
Hampate Ba, Sarah Auburn, Christopher G Jacob, Sonia Goncalves, Craig W Duffy, Lindsay B Stewart, Richard N Price, Yacine Boubou Deh, Mamadou Yero Diallo, Abderahmane Tandia, Dominic P Kwiatkowski, David J Conway
Multi-locus genotyping reveals established endemicity of a geographically distinct Plasmodium vivax population in Mauritania, West Africa. PLoS neglected tropical diseases 14 (12) (2020)
Olivo Miotto, Makoto Sekihara, Shin-Ichiro Tachibana, Masato Yamauchi, Richard D Pearson, Roberto Amato, Sonia Gonçalves, Somya Mehra, Rintis Noviyanti, Jutta Marfurt, Sarah Auburn, Richard N Price, Ivo Mueller, Mie Ikeda, Toshiyuki Mori, Makoto Hirai, Livingstone Tavul, Manuel W Hetzel, Moses Laman, Alyssa E Barry, Pascal Ringwald, Jun Ohashi, Francis Hombhanje, Dominic P Kwiatkowski, Toshihiro Mita
Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea. PLoS pathogens 16 (12) (2020)
Sarah Auburn, Ernest Diez Benavente, Olivo Miotto, Richard D Pearson, Roberto Amato, Matthew J Grigg, Bridget E Barber, Timothy William, Irene Handayuni, Jutta Marfurt, Hidayat Trimarsanto, Rintis Noviyanti, Kanlaya Sriprawat, Francois H Nosten, Susana Campino, Taane Gregory Clark, Nicholas M Anstey, Dominic P Kwiatkowski, Ric N Price
Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics. Nature communications 9 (1) (2018)
Hidayat Trimarsanto, Ernest D Benavente, Rintis Noviyanti, Retno Ayu Setya Utami, Leily Trianty, Zuleima Pava, Sisay Getachew, Jung-Yeon Kim, Youn-Kyoung Goo, Sonam Wangchuck, Yaobao Liu, Qi Gao, Simone Dowd, Qin Cheng, Taane G Clark, Ric N Price, Sarah Auburn
VivaxGEN: An open access platform for comparative analysis of short tandem repeat genotyping data in Plasmodium vivax populations. PLoS neglected tropical diseases 11 (3) (2017)
Tesfay Abreha, Jimee Hwang, Kamala Thriemer, Yehualashet Tadesse, Samuel Girma, Zenebe Melaku, Ashenafi Assef, Moges Kassa, Mark D Chatfield, Keren Z Landman, Stella M Chenet, Naomi W Lucchi, Venkatachalam Udhayakumar, Zhiyong Zhou, Ya Ping Shi, S Patrick Kachur, Daddi Jima, Amha Kebede, Hiwot Solomon, Addis Mekasha, Bereket Hailegiorgis Alemayehu, Joseph L Malone, Gunewardena Dissanayake, Hiwot Teka, Sarah Auburn, Lorenz von Seidlein, Ric N Price
Comparison of artemether-lumefantrine and chloroquine with and without primaquine for the treatment of Plasmodium vivax infection in Ethiopia: A randomized controlled trial. PLoS medicine 14 (5) (2017)
Zuleima Pava, Rintis Noviyanti, Irene Handayuni, Hidayat Trimarsanto, Leily Trianty, Faustina H Burdam, Enny Kenangalem, Retno A S Utami, Yusrifar K Tirta, Farah Coutrier, Jeanne R Poespoprodjo, Ric N Price, Jutta Marfurt, Sarah Auburn
Genetic micro-epidemiology of malaria in Papua Indonesia: Extensive P. vivax diversity and a distinct subpopulation of asymptomatic P. falciparum infections. PloS one 12 (5) (2017)
Yaghoob Hamedi, Khojasteh Sharifi-Sarasiabi, Farzaneh Dehghan, Reza Safari, Sheren To, Irene Handayuni, Hidayat Trimarsanto, Ric N Price, Sarah Auburn
Molecular Epidemiology of P. vivax in Iran: High Diversity and Complex Sub-Structure Using Neutral Markers, but No Evidence of Y976F Mutation at pvmdr1. PloS one 11 (11) (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Sarah Auburn