Simon Heumos

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 7

Top Topics

Convolutional Neural Network

Top Venues

Bioinformatics (Oxford, England)

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Simon Heumos, Andrea Guarracino, Jan-Niklas Manuel Schmelzle, Jiajie Li, Zhiru Zhang, Jörg Hagmann, Sven Nahnsen, Pjotr Prins, Erik P Garrison
Pangenome graph layout by Path-Guided Stochastic Gradient Descent. Bioinformatics (Oxford, England) 40 (7) (2024)
Simon Heumos, Andrea Guarracino, Jan-Niklas Manuel Schmelzle, Jiajie Li, Zhiru Zhang, Jörg Hagmann, Sven Nahnsen, Pjotr Prins, Erik P Garrison
Pangenome graph layout by Path-Guided Stochastic Gradient Descent. Bioinformatics (Oxford, England) 40 (7) (2024)
Simon Heumos, Andrea Guarracino, Jan-Niklas Manuel Schmelzle, Jiajie Li, Zhiru Zhang, Jörg Hagmann, Sven Nahnsen, Pjotr Prins, Erik P Garrison
Pangenome graph layout by Path-Guided Stochastic Gradient Descent. Bioinformatics (Oxford, England) 40 (7) (2024)
Erik P Garrison, Andrea Guarracino, Simon Heumos, Flavia Villani, Zhigui Bao, Lorenzo Tattini, Jörg Hagmann, Sebastian Vorbrugg, Santiago Marco-Sola, Christian Kubica, David George Ashbrook, Kaisa Thorell, Rachel L Rusholme-Pilcher, Gianni Liti, Emilio Rudbeck, Sven Nahnsen, Zuyu Yang, Mwaniki N Moses, Franklin L Nobrega, Yi Wu, Hao Chen, Joep de Ligt, Peter H Sudmant, Nicole Soranzo, Vincenza Colonna, Robert W Williams, Pjotr Prins
Building pangenome graphs. bioRxiv : the preprint server for biology (2023)
Simon Heumos, Andrea Guarracino, Jan-Niklas Manuel Schmelzle, Jiajie Li, Zhiru Zhang, Jörg Hagmann, Sven Nahnsen, Pjotr Prins, Erik P Garrison
Pangenome graph layout by Path-Guided Stochastic Gradient Descent. bioRxiv : the preprint server for biology (2023)
Andrea Guarracino, Simon Heumos, Sven Nahnsen, Pjotr Prins, Erik P Garrison
ODGI: understanding pangenome graphs. Bioinformatics (Oxford, England) 38 (13) (2022)
Jordan M Eizenga, Adam M Novak, Emily Kobayashi, Flavia Villani, Cecilia Cisar, Simon Heumos, Glenn Hickey, Vincenza Colonna, Benedict Paten, Erik Garrison
Efficient dynamic variation graphs. Bioinformatics (Oxford, England) 36 (21) (2021)