Siyuan Chen

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 10

Top Topics

Top Venues

Science advances

Nature communications

Genome research

Briefings in bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Siyuan Chen, Jiuming Wang, Inkyung Jung, Zhaowen Qiu, Xin Gao, Yu Li
A fast and adaptive detection framework for genome-wide chromatin loop mapping from Hi-C data. Genome research (2024)
Juexiao Zhou, Siyuan Chen, Yulian Wu, Haoyang Li, Bin Zhang, Longxi Zhou, Yan Hu, Zihang Xiang, Zhongxiao Li, Ningning Chen, Wenkai Han, Chencheng Xu, Di Wang, Xin Gao
PPML-Omics: A privacy-preserving federated machine learning method protects patients' privacy in omic data. Science advances 10 (5) (2024)
Junkang Wei, Jin Xiao, Siyuan Chen, Licheng Zong, Xin Gao, Yu Li
ProNet DB: a proteome-wise database for protein surface property representations and RNA-binding profiles. Database : the journal of biological databases and curation 2024 (2024)
Juexiao Zhou, Siyuan Chen, Yulian Wu, Haoyang Li, Bin Zhang, Longxi Zhou, Yan Hu, Zihang Xiang, Zhongxiao Li, Ningning Chen, Wenkai Han, Chencheng Xu, Di Wang, Xin Gao
PPML-Omics: A privacy-preserving federated machine learning method protects patients' privacy in omic data. Science advances 10 (5) (2024)
Juexiao Zhou, Siyuan Chen, Yulian Wu, Haoyang Li, Bin Zhang, Longxi Zhou, Yan Hu, Zihang Xiang, Zhongxiao Li, Ningning Chen, Wenkai Han, Chencheng Xu, Di Wang, Xin Gao
PPML-Omics: A privacy-preserving federated machine learning method protects patients' privacy in omic data. Science advances 10 (5) (2024)
Haoyang Li, Juexiao Zhou, Zhongxiao Li, Siyuan Chen, Xingyu Liao, Bin Zhang, Ruochi Zhang, Yu Wang, Shiwei Sun, Xin Gao
A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics. Nature communications 14 (1) (2023)
Haoyang Li, Juexiao Zhou, Zhongxiao Li, Siyuan Chen, Xingyu Liao, Bin Zhang, Ruochi Zhang, Yu Wang, Shiwei Sun, Xin Gao
A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics. Nature communications 14 (1) (2023)
Haoyang Li, Juexiao Zhou, Zhongxiao Li, Siyuan Chen, Xingyu Liao, Bin Zhang, Ruochi Zhang, Yu Wang, Shiwei Sun, Xin Gao
A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics. Nature communications 14 (1) (2023)
Wenkai Han, Yuqi Cheng, Jiayang Chen, Huawen Zhong, Zhihang Hu, Siyuan Chen, Licheng Zong, Liang Hong, Ting-Fung Chan, Irwin King, Xin Gao, Yu Li
Self-supervised contrastive learning for integrative single cell RNA-seq data analysis. Briefings in bioinformatics 23 (5) (2022)
Yu Li, Siyuan Chen, Trisevgeni Rapakoulia, Hiroyuki Kuwahara, Kevin Y Yip, Xin Gao
Deep learning identifies and quantifies recombination hotspot determinants. Bioinformatics (Oxford, England) 38 (10) (2022)