Subina Mehta

Publication Activity (10 Years)

Years Active: 2018-2023
Publications (10 Years): 13

Top Topics

Coronavirus Disease

High Performance Liquid Chromatography

Top Venues

Journal of proteome research

This page only lists publications with an associated author ORCID identifier.

Publications

Surbhi Bihani, Aryan Gupta, Subina Mehta, Andrew T Rajczewski, James Johnson, Dhanush Borishetty, Timothy J Griffin, Sanjeeva Srivastava, Pratik D Jagtap
Metaproteomic Analysis of Nasopharyngeal Swab Samples to Identify Microbial Peptides in COVID-19 Patients. Journal of proteome research (2023)
Subina Mehta, Valdemir M Carvalho, Andrew T Rajczewski, Olivier Pible, Björn A Grüning, James E Johnson, Reid Wagner, Jean Armengaud, Timothy J Griffin, Pratik D Jagtap
Catching the Wave: Detecting Strain-Specific SARS-CoV-2 Peptides in Clinical Samples Collected during Infection Waves from Diverse Geographical Locations. Viruses 14 (10) (2022)
Andrew T Rajczewski, Qiyuan Han, Subina Mehta, Praveen Kumar, Pratik D Jagtap, Charles G Knutson, James G Fox, Natalia Y Tretyakova, Timothy J Griffin
Quantitative Proteogenomic Characterization of Inflamed Murine Colon Tissue Using an Integrated Discovery, Verification, and Validation Proteogenomic Workflow. Proteomes 10 (2) (2022)
Subina Mehta, Marie Crane, Emma Leith, Bérénice Batut, Saskia Hiltemann, Magnus Ø Arntzen, Benoit Josef Kunath, Francesco Delogu, Ray Sajulga, Praveen Kumar, James E Johnson, Timothy J Griffin, Pratik D Jagtap
ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework. F1000Research 10 (2021)
Subina Mehta, Praveen Kumar, Marie Crane, James E Johnson, Ray Sajulga, Dinh Duy An Nguyen, Thomas McGowan, Magnus Ø Arntzen, Timothy J Griffin, Pratik D Jagtap
Updates on metaQuantome Software for Quantitative Metaproteomics. Journal of proteome research 20 (4) (2021)
Subina Mehta, Marie Crane, Emma Leith, Bérénice Batut, Saskia Hiltemann, Magnus Ø Arntzen, Benoit Josef Kunath, Phillip B Pope, Francesco Delogu, Ray Sajulga, Praveen Kumar, James E Johnson, Timothy J Griffin, Pratik D Jagtap
ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework. F1000Research 10 (2021)
Peter S Thuy-Boun, Subina Mehta, Bjoern Andreas Gruening, Thomas McGowan, An Nguyen, Andrew T Rajczewski, James E Johnson, Timothy J Griffin, Dennis W Wolan, Pratik D Jagtap
Metaproteomics Analysis of SARS-CoV-2-Infected Patient Samples Reveals Presence of Potential Coinfecting Microorganisms. Journal of proteome research 20 (2) (2021)
Subina Mehta, Caleb W Easterly, Ray Sajulga, Robert J Millikin, Andrea Argentini, Ignacio Eguinoa, Lennart Martens, Michael R Shortreed, Lloyd M Smith, Thomas McGowan, Praveen Kumar, James E Johnson, Timothy J Griffin, Pratik D Jagtap
Precursor Intensity-Based Label-Free Quantification Software Tools for Proteomic and Multi-Omic Analysis within the Galaxy Platform. Proteomes 8 (3) (2020)
Ray Sajulga, Caleb W Easterly, Michael Riffle, Bart Mesuere, Thilo Muth, Subina Mehta, Praveen Kumar, James Johnson, Bjoern Andreas Gruening, Henning Schiebenhoefer, Carolin A Kolmeder, Stephan Fuchs, Brook L Nunn, Joel Rudney, Timothy J Griffin, Pratik D Jagtap
Survey of metaproteomics software tools for functional microbiome analysis. PloS one 15 (11) (2020)
Praveen Kumar, James E Johnson, Caleb W Easterly, Subina Mehta, Ray Sajulga, Brook L Nunn, Pratik D Jagtap, Timothy J Griffin
A Sectioning and Database Enrichment Approach for Improved Peptide Spectrum Matching in Large, Genome-Guided Protein Sequence Databases. Journal of proteome research 19 (7) (2020)
Shane L Hubler, Praveen Kumar, Subina Mehta, Caleb W Easterly, James E Johnson, Pratik D Jagtap, Timothy J Griffin
Challenges in Peptide-Spectrum Matching: A Robust and Reproducible Statistical Framework for Removing Low-Accuracy, High-Scoring Hits. Journal of proteome research 19 (1) (2019)
Praveen Kumar, Priyabrata Panigrahi, James Johnson, Wanda J Weber, Subina Mehta, Ray Sajulga, Caleb Easterly, Brian A Crooker, Mohammad Heydarian, Krishanpal Anamika, Timothy J Griffin, Pratik D Jagtap
QuanTP: A Software Resource for Quantitative Proteo-Transcriptomic Comparative Data Analysis and Informatics. Journal of proteome research 18 (2) (2019)
Andrea Argentini, An Staes, Bjoern Andreas Gruening, Subina Mehta, Caleb W Easterly, Timothy J Griffin, Pratik D Jagtap, Francis Impens, Lennart Martens
Update on the moFF Algorithm for Label-Free Quantitative Proteomics. Journal of proteome research 18 (2) (2018)