Taisei Kikuchi

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 25

Top Topics

Helicobacter Pylori

Drosophila Melanogaster

Top Venues

Nature ecology & evolution

Microbiology resource announcements

Scientific reports

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Katsunori Tamagawa, Mehmet Dayi, Simo Sun, Rikako Hata, Taisei Kikuchi, Nami Haruta, Asako Sugimoto, Takashi Makino
Evolutionary changes of noncoding elements associated with transition of sexual mode in Caenorhabditis nematodes. Science advances 10 (37) (2024)
Cheng-Kuo Lai, Yi-Chien Lee, Huei-Mien Ke, Min R Lu, Wei-An Liu, Hsin-Han Lee, Yu-Ching Liu, Toyoshi Yoshiga, Taisei Kikuchi, Peichen J Chen, Isheng Jason Tsai
The Aphelenchoides genomes reveal substantial horizontal gene transfers in the last common ancestor of free-living and major plant-parasitic nematodes. Molecular ecology resources (2023)
Kohta Yoshida, Christian Rödelsperger, Waltraud Röseler, Metta Riebesell, Simo Sun, Taisei Kikuchi, Ralf J Sommer
Chromosome fusions repatterned recombination rate and facilitated reproductive isolation during Pristionchus nematode speciation. Nature ecology & evolution 7 (3) (2023)
Asuka Kounosu, Simo Sun, Yasunobu Maeda, Mehmet Dayi, Akemi Yoshida, Haruhiko Maruyama, Vicky L Hunt, Asako Sugimoto, Taisei Kikuchi
Syntenic relationship of chromosomes in Strongyloides species and Rhabditophanes diutinus based on the chromosome-level genome assemblies. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1894) (2023)
Yuta Owashi, Toma Minami, Taisei Kikuchi, Akemi Yoshida, Ryohei Nakano, Daisuke Kageyama, Tetsuya Adachi-Hagimori
Microbiome of Zoophytophagous Biological Control Agent Nesidiocoris tenuis. Microbial ecology (2023)
Reem Al-Jawabreh, Roy M Anderson, Louise E Atkinson, Jack Bickford-Smith, Richard S Bradbury, Minka Breloer, Astra S Bryant, Dora Buonfrate, Luke C Cadd, Bethany Crooks, Michela Deiana, Warwick Grant, Elissa A Hallem, Shannon M Hedtke, Vicky L Hunt, Virak Khieu, Taisei Kikuchi, Asuka Kounosu, Dominika Lastik, Lisette van Lieshout, Yuchen Liu, Henry J McSorley, Paul McVeigh, Angela Mousley, Ben Murcott, William David Nevin, Eva Nosková, Elena Pomari, Kieran Reynolds, Kirstin E Ross, Adrian Streit, Mona Suleiman, Natalia Tiberti, Mark E Viney
Strongyloides questions-a research agenda for the future. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1894) (2023)
Kohta Yoshida, Christian Rödelsperger, Waltraud Röseler, Metta Riebesell, Simo Sun, Taisei Kikuchi, Ralf J Sommer
Chromosome fusions repatterned recombination rate and facilitated reproductive isolation during Pristionchus nematode speciation. Nature ecology & evolution (2023)
Kohta Yoshida, Christian Rödelsperger, Waltraud Röseler, Metta Riebesell, Simo Sun, Taisei Kikuchi, Ralf J Sommer
Chromosome fusions repatterned recombination rate and facilitated reproductive isolation during Pristionchus nematode speciation. Nature ecology & evolution 7 (3) (2023)
Kohta Yoshida, Christian Rödelsperger, Waltraud Röseler, Metta Riebesell, Simo Sun, Taisei Kikuchi, Ralf J Sommer
Chromosome fusions repatterned recombination rate and facilitated reproductive isolation during Pristionchus nematode speciation. Nature ecology & evolution 7 (3) (2023)
Kohta Yoshida, Christian Rödelsperger, Waltraud Röseler, Metta Riebesell, Simo Sun, Taisei Kikuchi, Ralf J Sommer
Chromosome fusions repatterned recombination rate and facilitated reproductive isolation during Pristionchus nematode speciation. Nature ecology & evolution 7 (3) (2023)
Yi-Chien Lee, Huei-Mien Ke, Yu-Ching Liu, Hsin-Han Lee, Min-Chen Wang, Yung-Che Tseng, Taisei Kikuchi, Isheng Jason Tsai
Single-worm long-read sequencing reveals genome diversity in free-living nematodes. Nucleic acids research (2023)
Ryoji Shinya, Simo Sun, Mehmet Dayi, Isheng Jason Tsai, Atsushi Miyama, Anthony Fu Chen, Koichi Hasegawa, Igor A Antoshechkin, Taisei Kikuchi, Paul W Sternberg
Possible stochastic sex determination in Bursaphelenchus nematodes. Nature communications 13 (1) (2022)
Gina Broitman-Maduro, Simo Sun, Taisei Kikuchi, Morris F Maduro
The GATA factor ELT-3 specifies endoderm in Caenorhabditis angaria in an ancestral gene network. Development (Cambridge, England) 149 (21) (2022)
Taisei Kikuchi, Mehmet Dayi, Vicky L Hunt, Kenji Ishiwata, Atsushi Toyoda, Asuka Kounosu, Simo Sun, Yasunobu Maeda, Yoko Kondo, Belkisyole Alarcon de Noya, Oscar Noya, Somei Kojima, Toshiaki Kuramochi, Haruhiko Maruyama
Genome of the fatal tapeworm Sparganum proliferum uncovers mechanisms for cryptic life cycle and aberrant larval proliferation. Communications biology 4 (1) (2021)
Daigo Tsubokawa, Taisei Kikuchi, Jae Man Lee, Takahiro Kusakabe, Yasuhiko Yamamoto, Haruhiko Maruyama
Venestatin from parasitic helminths interferes with receptor for advanced glycation end products (RAGE)-mediated immune responses to promote larval migration. PLoS pathogens 17 (6) (2021)
Kazunori Murase, Takashi Nozawa, Chihiro Aikawa, Miki Nagao, Tadayoshi Ikebe, Akemi Yoshida, Taisei Kikuchi, Ichiro Nakagawa
Complete Genome Sequences of Streptococcus pyogenes Serotype M3, M28, and M89 Strains Isolated from Human Patients in Japan, 1994 to 2009. Microbiology resource announcements 9 (42) (2020)
Atsuko Minowa-Nozawa, Takashi Nozawa, Daisuke Takamatsu, Akemi Yoshida, Kazunori Murase, Taisei Kikuchi, Kasumi Ishida-Kuroki, Yoshihiro Nitta, Tsutomu Sekizaki, Ichiro Nakagawa
Complete Genome Sequences of Two Streptococcus suis Strains Isolated from Asymptomatic Pigs. Microbiology resource announcements 9 (47) (2020)
Mehmet Dayi, Simo Sun, Yasunobu Maeda, Ryusei Tanaka, Akemi Yoshida, Isheng Jason Tsai, Taisei Kikuchi
Nearly Complete Genome Assembly of the Pinewood Nematode Bursaphelenchus xylophilus Strain Ka4C1. Microbiology resource announcements 9 (42) (2020)
Simo Sun, Ryoji Shinya, Mehmet Dayi, Akemi Yoshida, Paul W Sternberg, Taisei Kikuchi
Telomere-to-Telomere Genome Assembly of Bursaphelenchus okinawaensis Strain SH1. Microbiology resource announcements 9 (43) (2020)
Suguru E Tanaka, Mehmet Dayi, Yasunobu Maeda, Isheng Jason Tsai, Ryusei Tanaka, Mark Bligh, Yuko Takeuchi-Kaneko, Kenji Fukuda, Natsumi Kanzaki, Taisei Kikuchi
Stage-specific transcriptome of Bursaphelenchus xylophilus reveals temporal regulation of effector genes and roles of the dauer-like stages in the lifecycle. Scientific reports 9 (1) (2019)
Asuka Kounosu, Kazunori Murase, Akemi Yoshida, Haruhiko Maruyama, Taisei Kikuchi
Improved 18S and 28S rDNA primer sets for NGS-based parasite detection. Scientific reports 9 (1) (2019)
Hiromi Kitazume, Mehmet Dayi, Ryusei Tanaka, Taisei Kikuchi
Assessment of the behaviour and survival of nematodes under low oxygen concentrations. PloS one 13 (5) (2018)
Natsumi Kanzaki, Isheng Jason Tsai, Ryusei Tanaka, Vicky L Hunt, Dang Liu, Kenji Tsuyama, Yasunobu Maeda, Satoshi Namai, Ryohei Kumagai, Alan Tracey, Nancy Holroyd, Stephen R Doyle, Gavin C Woodruff, Kazunori Murase, Hiromi Kitazume, Cynthia Chai, Allison Akagi, Oishika Panda, Huei-Mien Ke, Frank C Schroeder, John Wang, Matthew Berriman, Paul W Sternberg, Asako Sugimoto, Taisei Kikuchi
Biology and genome of a newly discovered sibling species of Caenorhabditis elegans. Nature communications 9 (1) (2018)
Zoe T Richards, Nina Yasuda, Taisei Kikuchi, Taryn Foster, Chika Mitsuyuki, Michael Stat, Yoshihisa Suyama, Nerida G Wilson
Integrated evidence reveals a new species in the ancient blue coral genus Heliopora (Octocorallia). Scientific reports 8 (1) (2018)
Rina Kudo, Hayato Masuya, Rikiya Endoh, Taisei Kikuchi, Hiroshi Ikeda
Gut bacterial and fungal communities in ground-dwelling beetles are associated with host food habit and habitat. The ISME journal 13 (3) (2018)