Isheng Jason Tsai (Isheng J Tsai)

Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 23

Top Venues

Nature microbiology

Molecular ecology resources

Nature communications

Nucleic acids research

Academia Sinica

Imperial College London (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Academia Sinica Jan 02 2019

Taiwan

Associate Research Fellow :: Biodiversity Research Center

Academia Sinica Jan 01 2015 - Jan 01 2019

Taiwan

Assistant Research Fellow :: Biodiversity Research Center

Academia Sinica Jan 01 2014 - Dec 31 2014

Taiwan

Postdoctoral Fellow :: Biodiversity Research Center

University of Miyazaki Dec 20 2012 - Dec 20 2013

Japan

JSPS Fellow :: Division of Parasitology, Faculty of Medicine

Wellcome Trust Sanger Institute Dec 01 2008 - Dec 13 2012

United Kingdom

Postdoctoral Fellow :: Parasite Genomics

Education History

Imperial College London Oct 01 2005 - Sep 01 2009

United Kingdom

PHD :: Biology

Imperial College London Oct 01 2004 - Sep 01 2005

United Kingdom

MSC :: Biology

University of Nottingham Oct 01 2001 - Jul 01 2004

United Kingdom

BSC :: Genetics Department

Publications

Pei-Feng Sun, Min R Lu, Yu-Ching Liu, Brandon J P Shaw, Chieh-Ping Lin, Hung-Wei Chen, Yu-Fei Lin, Daphne Z Hoh, Huei-Mien Ke, I-Fan Wang, Mei-Yeh Jade Lu, Erica B Young, Jonathan Millett, Roland Kirschner, Ying-Chung Jimmy Lin, Ying-Lan Chen, Isheng Jason Tsai
An acidophilic fungus promotes prey digestion in a carnivorous plant. Nature microbiology (2024)
Pei-Feng Sun, Min R Lu, Yu-Ching Liu, Brandon J P Shaw, Chieh-Ping Lin, Hung-Wei Chen, Yu-Fei Lin, Daphne Z Hoh, Huei-Mien Ke, I-Fan Wang, Mei-Yeh Jade Lu, Erica B Young, Jonathan Millett, Roland Kirschner, Ying-Chung Jimmy Lin, Ying-Lan Chen, Isheng Jason Tsai
An acidophilic fungus promotes prey digestion in a carnivorous plant. Nature microbiology (2024)
Cheng-Kuo Lai, Yi-Chien Lee, Huei-Mien Ke, Min R Lu, Wei-An Liu, Hsin-Han Lee, Yu-Ching Liu, Toyoshi Yoshiga, Taisei Kikuchi, Peichen J Chen, Isheng Jason Tsai
The Aphelenchoides genomes reveal substantial horizontal gene transfers in the last common ancestor of free-living and major plant-parasitic nematodes. Molecular ecology resources (2023)
Felipe M G Mattos, Niklas Dreyer, Chia-Ling Fong, Yung-Hui Victoria Wen, Dharmesh Jain, Mattia De Vivo, Yu-Sin Huang, John Karichu Mwihaki, Tzi-Yuan Wang, Ming-Jay Ho, Isheng Jason Tsai, John Wang, Benny K K Chan, Ryuji J Machida
Potential PCR amplification bias in identifying complex ecological patterns: Higher species compositional homogeneity revealed in smaller-size coral reef zooplankton by metatranscriptomics. Molecular ecology resources (2023)
Cheng-Kuo Lai, Yi-Chien Lee, Huei-Mien Ke, Min R Lu, Wei-An Liu, Hsin-Han Lee, Yu-Ching Liu, Toyoshi Yoshiga, Taisei Kikuchi, Peichen J Chen, Isheng Jason Tsai
The Aphelenchoides genomes reveal substantial horizontal gene transfers in the last common ancestor of free-living and major plant parasitic nematodes. Molecular ecology resources (2023)
Yu-Chen Chen, Chia-Ying Chen, Tai-Wei Chiang, Ming-Hsien Chan, Michael Hsiao, Huei-Mien Ke, Isheng Jason Tsai, Trees-Juen Chuang
Detecting intragenic trans-splicing events from non-co-linearly spliced junctions by hybrid sequencing. Nucleic acids research (2023)
Neha Sahu, Boris Indic, Johanna Wong-Bajracharya, Zsolt Merényi, Huei-Mien Ke, Steven R Ahrendt, Tori-Lee Monk, Sándor Kocsubé, Elodie Drula, Anna Lipzen, Balázs Bálint, Bernard Henrissat, Bill Andreopoulos, Francis M Martin, Christoffer Bugge Harder, Daniel Rigling, Kathryn L Ford, Gary D Foster, Jasmyn Pangilinan, Alexie Papanicolaou, Kerrie W Barry, Kurt M LaButti, Máté Virágh, Maxim Koriabine, Mi Yan, Robert Riley, Simang Champramary, Krista L Plett, Igor V Grigoriev, Isheng Jason Tsai, Jason Slot, György Sipos, Jonathan M Plett, László G Nagy
Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria. Nature microbiology (2023)
Yi-Chien Lee, Huei-Mien Ke, Yu-Ching Liu, Hsin-Han Lee, Min-Chen Wang, Yung-Che Tseng, Taisei Kikuchi, Isheng Jason Tsai
Single-worm long-read sequencing reveals genome diversity in free-living nematodes. Nucleic acids research (2023)
Ryoji Shinya, Simo Sun, Mehmet Dayi, Isheng Jason Tsai, Atsushi Miyama, Anthony Fu Chen, Koichi Hasegawa, Igor A Antoshechkin, Taisei Kikuchi, Paul W Sternberg
Possible stochastic sex determination in Bursaphelenchus nematodes. Nature communications 13 (1) (2022)
Daphne Z Hoh, Hsin-Han Lee, Naohisa Wada, Wei-An Liu, Min R Lu, Cheng-Kuo Lai, Huei-Mien Ke, Pei-Feng Sun, Sen-Lin Tang, Wen-Hsin Chung, Ying-Lien Chen, Chia-Lin Chung, Isheng Jason Tsai
Comparative genomic and transcriptomic analyses of trans-kingdom pathogen Fusarium solani species complex reveal degrees of compartmentalization. BMC biology 20 (1) (2022)
Chen-Siang Ng, Cheng-Kuo Lai, Huei-Mien Ke, Hsin-Han Lee, Chih-Feng Chen, Pin-Chi Tang, Hsu-Cheng Cheng, Mei-Yeh Jade Lu, Wen-Hsiung Li, Isheng Jason Tsai
Genome Assembly and Evolutionary Analysis of the Mandarin Duck Aix galericulata Reveal Strong Genome Conservation among Ducks. Genome biology and evolution 14 (6) (2022)
Tracy Jiaye Lee, Yu-Ching Liu, Wei-An Liu, Yu-Fei Lin, Hsin-Han Lee, Huei-Mien Ke, Jen-Pan Huang, Mei-Yeh Jade Lu, Chia-Lun Hsieh, Kuo-Fang Chung, Gianni Liti, Isheng Jason Tsai
Extensive sampling of Saccharomyces cerevisiae in Taiwan reveals ecology and evolution of predomesticated lineages. Genome research 32 (5) (2022)
Tse-Yen Liu, Chao-Han Chen, Yu-Liang Yang, Isheng Jason Tsai, Ying-Ning Ho, Chia-Lin Chung
The brown root rot fungus Phellinus noxius affects microbial communities in different root-associated niches of Ficus trees. Environmental microbiology (2021)
Ching-Ting Yang, Guillermo Vidal-Diez de Ulzurrun, A Pedro Gonçalves, Hung-Che Lin, Ching-Wen Chang, Tsung-Yu Huang, Sheng-An Chen, Cheng-Kuo Lai, Isheng Jason Tsai, Frank C Schroeder, Jason E Stajich, Yen-Ping Hsueh
Natural diversity in the predatory behavior facilitates the establishment of a robust model strain for nematode-trapping fungi. Proceedings of the National Academy of Sciences of the United States of America 117 (12) (2020)
Huei-Mien Ke, Hsin-Han Lee, Chan-Yi Ivy Lin, Yu-Ching Liu, Min R Lu, Jo-Wei Allison Hsieh, Chiung-Chih Chang, Pei-Hsuan Wu, Mei-Yeh Jade Lu, Jeng-Yi Li, Gaus Shang, Rita Jui-Hsien Lu, László G Nagy, Pao-Yang Chen, Hsiao-Wei Kao, Isheng Jason Tsai
Mycena genomes resolve the evolution of fungal bioluminescence. Proceedings of the National Academy of Sciences of the United States of America 117 (49) (2020)
Yu-Te Lin, Yu-Fei Lin, Isheng Jason Tsai, Ed-Haun Chang, Shih-Hao Jien, Yen-Ju Lin, Chih-Yu Chiu
Structure and Diversity of Soil Bacterial Communities in Offshore Islands. Scientific reports 9 (1) (2019)
Shu-Miaw Chaw, Yu-Ching Liu, Yu-Wei Wu, Han-Yu Wang, Chan-Yi Ivy Lin, Chung-Shien Wu, Huei-Mien Ke, Lo-Yu Chang, Chih-Yao Hsu, Hui-Ting Yang, Edi Sudianto, Min-Hung Hsu, Kun-Pin Wu, Ling-Ni Wang, James H Leebens-Mack, Isheng Jason Tsai
Stout camphor tree genome fills gaps in understanding of flowering plant genome evolution. Nature plants 5 (1) (2019)
Suguru E Tanaka, Mehmet Dayi, Yasunobu Maeda, Isheng Jason Tsai, Ryusei Tanaka, Mark Bligh, Yuko Takeuchi-Kaneko, Kenji Fukuda, Natsumi Kanzaki, Taisei Kikuchi
Stage-specific transcriptome of Bursaphelenchus xylophilus reveals temporal regulation of effector genes and roles of the dauer-like stages in the lifecycle. Scientific reports 9 (1) (2019)
Natsumi Kanzaki, Isheng Jason Tsai, Ryusei Tanaka, Vicky L Hunt, Dang Liu, Kenji Tsuyama, Yasunobu Maeda, Satoshi Namai, Ryohei Kumagai, Alan Tracey, Nancy Holroyd, Stephen R Doyle, Gavin C Woodruff, Kazunori Murase, Hiromi Kitazume, Cynthia Chai, Allison Akagi, Oishika Panda, Huei-Mien Ke, Frank C Schroeder, John Wang, Matthew Berriman, Paul W Sternberg, Asako Sugimoto, Taisei Kikuchi
Biology and genome of a newly discovered sibling species of Caenorhabditis elegans. Nature communications 9 (1) (2018)
Dang Liu, Martin Hunt, Isheng Jason Tsai
Inferring synteny between genome assemblies: a systematic evaluation. BMC bioinformatics 19 (1) (2018)
Huei-Mien Ke, Dang Liu, Yoshitoshi Ogura, Tetsuya Hayashi, Henryk Urbanczyk, Isheng Jason Tsai
Tracing Genomic Divergence of Vibrio Bacteria in the Harveyi Clade. Journal of bacteriology 200 (15) (2018)
Chia-Lin Chung, Tracy Jiaye Lee, Mitsuteru Akiba, Hsin-Han Lee, Tzu-Hao Kuo, Dang Liu, Huei-Mien Ke, Toshiro Yokoi, Marylette B Roa, Mei-Yeh J Lu, Ya-Yun Chang, Pao-Jen Ann, Jyh-Nong Tsai, Chien-Yu Chen, Shean-Shong Tzean, Yuko Ota, Tsutomu Hattori, Norio Sahashi, Ruey-Fen Liou, Taisei Kikuchi, Isheng Jason Tsai
Comparative and population genomic landscape of Phellinus noxius: A hypervariable fungus causing root rot in trees. Molecular ecology 26 (22) (2017)
James A Cotton, Sasisekhar Bennuru, Alexandra Grote, Bhavana Harsha, Alan Tracey, Robin Beech, Stephen R Doyle, Matthew Dunn, Julie C Dunning Hotopp, Nancy Holroyd, Taisei Kikuchi, Olivia Lambert, Amruta Mhashilkar, Prudence Mutowo, Nirvana Nursimulu, Jose M C Ribeiro, Matthew B Rogers, Eleanor Stanley, Lakshmipuram S Swapna, Isheng Jason Tsai, Thomas R Unnasch, Denis Voronin, John Parkinson, Thomas B Nutman, Elodie Ghedin, Matthew Berriman, Sara Lustigman
The genome of Onchocerca volvulus, agent of river blindness. Nature microbiology 2 (2016)

Isheng Jason Tsai.css-eqlu8i{font-size:small;padding-left:4px;} (Isheng J Tsai)

Publication Activity (10 Years)

Top Topics

Top Venues

Isheng Jason Tsai (Isheng J Tsai)