Timothy G Vaughan

ORCID

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 19

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Viruses

Bioinformatics (Oxford, England)

Virus evolution

Eidgenössische Technische Hochschule Zürich

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Eidgenössische Technische Hochschule Zürich

Switzerland

Senior Scientist :: Department of Biosystems Science and Engineering

University of Auckland

New Zealand

Postdoc :: Department of Computer Science

Swinburne University of Technology

Australia

Postdoc :: Centre for Atom Optics and Ultrafast Spectroscopy

University of Queensland

Australia

Research Assistant :: Queensland Brain Institute

Publications

Timothy G Vaughan, Jérémie Scire, Sarah A Nadeau, Tanja Stadler
Estimates of early outbreak-specific SARS-CoV-2 epidemiological parameters from genomic data. Proceedings of the National Academy of Sciences of the United States of America 121 (2) (2024)
Timothy G Vaughan, Jérémie Scire, Sarah A Nadeau, Tanja Stadler
Estimates of early outbreak-specific SARS-CoV-2 epidemiological parameters from genomic data. Proceedings of the National Academy of Sciences of the United States of America 121 (2) (2024)
Timothy G Vaughan, Jérémie Scire, Sarah A Nadeau, Tanja Stadler
Estimates of early outbreak-specific SARS-CoV-2 epidemiological parameters from genomic data. Proceedings of the National Academy of Sciences of the United States of America 121 (2) (2024)
Timothy G Vaughan, Jérémie Scire, Sarah A Nadeau, Tanja Stadler
Estimates of early outbreak-specific SARS-CoV-2 epidemiological parameters from genomic data. Proceedings of the National Academy of Sciences of the United States of America 121 (2) (2024)
Timothy G Vaughan
ReMASTER: improved phylodynamic simulation for BEAST 2.7. Bioinformatics (Oxford, England) 40 (1) (2024)
Timothy G Vaughan
ReMASTER: improved phylodynamic simulation for BEAST 2.7. Bioinformatics (Oxford, England) 40 (1) (2024)
Timothy G Vaughan
ReMASTER: improved phylodynamic simulation for BEAST 2.7. Bioinformatics (Oxford, England) 40 (1) (2024)
Claire Guinat, Hao Tang, Qiqi Yang, Cecilia Valenzuela Agüí, Timothy G Vaughan, Jérémie Scire, Hongjie Yu, Wei Wang, Zhiyuan Chen, Mariette F Ducatez, Tanja Stadler
Bayesian phylodynamics reveals the transmission dynamics of avian influenza A(H7N9) virus at the human-live bird market interface in China. Proceedings of the National Academy of Sciences of the United States of America 120 (17) (2023)
Claire Guinat, Cecilia Valenzuela Agüí, Timothy G Vaughan, Jérémie Scire, Katja V Goller, Christoph Staubach, Jacqueline King, Edyta Świętoń, Ádám Dán, Lenka Černíková, Mariette F Ducatez, Tanja Stadler
Disentangling the role of poultry farms and wild birds in the spread of highly pathogenic avian influenza virus in Europe. Virus evolution 8 (2) (2022)
Claire Guinat, Cecilia Valenzuela Agüí, Timothy G Vaughan, Jérémie Scire, Katja V Goller, Christoph Staubach, Jacqueline King, Edyta Świętoń, Ádám Dán, Lenka Černíková, Mariette F Ducatez, Tanja Stadler
Disentangling the role of poultry farms and wild birds in the spread of highly pathogenic avian influenza virus in Europe. Virus evolution 8 (2) (2022)
Jérémie Scire, Joëlle Barido-Sottani, Denise Kühnert, Timothy G Vaughan, Tanja Stadler
Robust Phylodynamic Analysis of Genetic Sequencing Data from Structured Populations. Viruses 14 (8) (2022)
Carlo Pacioni, Robyn N Hall, Tanja Strive, David S L Ramsey, Mandev S Gill, Timothy G Vaughan
Comparative Epidemiology of Rabbit Haemorrhagic Disease Virus Strains from Viral Sequence Data. Viruses 15 (1) (2022)
Pierre Barrat-Charlaix, Timothy G Vaughan, Richard A Neher
TreeKnit: Inferring ancestral reassortment graphs of influenza viruses. PLoS computational biology 18 (8) (2022)
Carlo Pacioni, Robyn N Hall, Tanja Strive, David S L Ramsey, Mandev S Gill, Timothy G Vaughan
Comparative Epidemiology of Rabbit Haemorrhagic Disease Virus Strains from Viral Sequence Data. Viruses 15 (1) (2022)
Carlo Pacioni, Robyn N Hall, Tanja Strive, David S L Ramsey, Mandev S Gill, Timothy G Vaughan
Comparative Epidemiology of Rabbit Haemorrhagic Disease Virus Strains from Viral Sequence Data. Viruses 15 (1) (2022)
Carlo Pacioni, Robyn N Hall, Tanja Strive, David S L Ramsey, Mandev S Gill, Timothy G Vaughan
Comparative Epidemiology of Rabbit Haemorrhagic Disease Virus Strains from Viral Sequence Data. Viruses 15 (1) (2022)
Emma B Hodcroft, Moira Zuber, Sarah A Nadeau, Timothy G Vaughan, Katharine H D Crawford, Christian L Althaus, Martina L Reichmuth, John E Bowen, Alexandra C Walls, Davide Corti, Jesse D Bloom, David J Veesler, David Mateo, Alberto Hernando, Iñaki Comas, Fernando Gonzáles-Candelas, null null, Tanja Stadler, Richard A Neher
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020. Nature 595 (7869) (2021)
Carlo Pacioni, Timothy G Vaughan, Tanja Strive, Susan Campbell, David S L Ramsey
Field validation of phylodynamic analytical methods for inference on epidemiological processes in wildlife. Transboundary and emerging diseases (2021)
Sarah A Nadeau, Timothy G Vaughan, Jérémie Scire, Jana Sanne Huisman, Tanja Stadler
The origin and early spread of SARS-CoV-2 in Europe. Proceedings of the National Academy of Sciences of the United States of America 118 (9) (2021)

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Publication Activity (10 Years)

Top Topics

Top Venues

Timothy G Vaughan