Jana Sanne Huisman (Jana S Huisman, Jana Huisman)

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 20

Top Topics

Escherichia Coli

Antimicrobial Resistance

Coronavirus Disease

Top Venues

PLoS computational biology

Evolution; international journal of organic evolution

Philosophical transactions of the Royal Society of London. Series B, Biological sciences

This page only lists publications with an associated author ORCID identifier.

Publications

Adrian Lison, Sam Abbott, Jana Sanne Huisman, Tanja Stadler
Generative Bayesian modeling to nowcast the effective reproduction number from line list data with missing symptom onset dates. PLoS computational biology 20 (4) (2024)
Sara Dionisi, Jana Sanne Huisman
Digest: The importance of genetic background in bacterial evolution. Evolution; international journal of organic evolution 78 (3) (2024)
Adrian Lison, Sam Abbott, Jana Sanne Huisman, Tanja Stadler
Generative Bayesian modeling to nowcast the effective reproduction number from line list data with missing symptom onset dates. PLoS computational biology 20 (4) (2024)
Adrian Lison, Sam Abbott, Jana Sanne Huisman, Tanja Stadler
Generative Bayesian modeling to nowcast the effective reproduction number from line list data with missing symptom onset dates. PLoS computational biology 20 (4) (2024)
Adrian Lison, Sam Abbott, Jana Sanne Huisman, Tanja Stadler
Generative Bayesian modeling to nowcast the effective reproduction number from line list data with missing symptom onset dates. PLoS computational biology 20 (4) (2024)
Chloé Pasin, Camila Rosat Consiglio, Jana Sanne Huisman, Ann-Marie Glasø de Lange, Hannah Peckham, Enriqueta Vallejo-Yagüe, Irene A Abela, Ulrika Islander, Nadia Neuner-Jehle, Maria Pujantell, Olivia Roth, Melanie Schirmer, Burcu Tepekule, Marius Zeeb, Anna Hachfeld, Karoline Aebi-Popp, Roger D Kouyos, Sebastian Bonhoeffer
Sex and gender in infection and immunity: addressing the bottlenecks from basic science to public health and clinical applications. Royal Society open science 10 (7) (2023)
Sara Dionisi, Jana Sanne Huisman
Digest: The importance of genetic background in bacterial evolution. Evolution; international journal of organic evolution (2023)
Elisabeth K Brockhaus, Daniel Wolffram, Tanja Stadler, Michael Osthege, Tanmay Mitra, Jonas M Littek, Ekaterina Krymova, Anna J Klesen, Jana Sanne Huisman, Stefan Heyder, Laura Marie Helleckes, Matthias An der Heiden, Sebastian Funk, Sam Abbott, Johannes Bracher
Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany. PLoS computational biology 19 (11) (2023)
Jana Sanne Huisman, Jérémie Scire, Daniel C Angst, Jinzhou Li, Richard A Neher, Marloes H Maathuis, Sebastian Bonhoeffer, Tanja Stadler
Estimation and worldwide monitoring of the effective reproductive number of SARS-CoV-2. eLife 11 (2022)
Erik Bakkeren, Ersin Gül, Jana Sanne Huisman, Yves Steiger, Andrea Rocker, Wolf-Dietrich Hardt, Médéric Diard
Impact of horizontal gene transfer on emergence and stability of cooperative virulence in Salmonella Typhimurium. Nature communications 13 (1) (2022)
Jana Sanne Huisman, Timothy G Vaughan, Adrian Egli, Sarah Tschudin-Sutter, Tanja Stadler, Sebastian Bonhoeffer
The effect of sequencing and assembly on the inference of horizontal gene transfer on chromosomal and plasmid phylogenies. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 377 (1861) (2022)
Jana Sanne Huisman, Jérémie Scire, Lea Caduff, Xavier Fernandez-Cassi, Pravin Ganesanandamoorthy, Anina Kull, Andreas Scheidegger, Elyse Stachler, Alexandria B Boehm, Bridgette Hughes, Alisha Knudson, Aaron Topol, Krista R Wigginton, Marlene K Wolfe, Tamar Kohn, Christoph Ort, Tanja Stadler, Timothy R Julian
Wastewater-Based Estimation of the Effective Reproductive Number of SARS-CoV-2. Environmental health perspectives 130 (5) (2022)
João Pires, Jana Sanne Huisman, Sebastian Bonhoeffer, Thomas P Van Boeckel
Increase in antimicrobial resistance in Escherichia coli in food animals between 1980 and 2018 assessed using genomes from public databases. The Journal of antimicrobial chemotherapy (2021)
Erik Bakkeren, Joana Anuschka Herter, Jana Sanne Huisman, Yves Steiger, Ersin Gül, Joshua Patrick Mark Newson, Alexander Oliver Brachmann, Jörn Piel, Roland R Regoes, Sebastian Bonhoeffer, Médéric Diard, Wolf-Dietrich Hardt
Pathogen invasion-dependent tissue reservoirs and plasmid-encoded antibiotic degradation boost plasmid spread in the gut. eLife 10 (2021)
Sarah A Nadeau, Timothy G Vaughan, Jérémie Scire, Jana Sanne Huisman, Tanja Stadler
The origin and early spread of SARS-CoV-2 in Europe. Proceedings of the National Academy of Sciences of the United States of America 118 (9) (2021)
Claudia Igler, Jana Sanne Huisman, Berit Siedentop, Sebastian Bonhoeffer, Sonja Lehtinen
Plasmid co-infection: linking biological mechanisms to ecological and evolutionary dynamics. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 377 (1842) (2021)
Sonja Lehtinen, Jana Sanne Huisman, Sebastian Bonhoeffer
Evolutionary mechanisms that determine which bacterial genes are carried on plasmids. Evolution letters 5 (3) (2021)
Laura M Carroll, Jana Sanne Huisman, Martin Wiedmann
Twentieth-century emergence of antimicrobial resistant human- and bovine-associated Salmonella enterica serotype Typhimurium lineages in New York State. Scientific reports 10 (1) (2020)
Fabienne Benz, Jana Sanne Huisman, Erik Bakkeren, Joana A Herter, Tanja Stadler, Martin Ackermann, Médéric Diard, Adrian Egli, Alex R Hall, Wolf-Dietrich Hardt, Sebastian Bonhoeffer
Plasmid- and strain-specific factors drive variation in ESBL-plasmid spread in vitro and in vivo. The ISME journal 15 (3) (2020)
Katelyn M Gostic, Lauren McGough, Edward B Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, Rene Niehus, James A Hay, Pablo De Salazar, Joel Hellewell, Sophie Meakin, James D Munday, Nikos I Bosse, Katharine Sherrat, Robin N Thompson, Laura F White, Jana Sanne Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah E Cobey
Practical considerations for measuring the effective reproductive number, Rt. PLoS computational biology 16 (12) (2020)