Tomasz Róg (Tomasz Rog)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2022
Publications (10 Years): 22

Top Venues

The journal of physical chemistry. B

Molecular pharmaceutics

ACS chemical neuroscience

Langmuir : the ACS journal of surfaces and colloids

Helsingin Yliopisto

Uniwersytet Jagiellonski w Krakowie (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Helsingin Yliopisto Jan 01 2016

Finland

Senior Researcher :: Department of Physics

Tampereen Teknillinen yliopisto Aug 01 2008 - Apr 30 2017

Finland

Academy of Finland Felloe, Senior Researcher :: Department of Physics

Aalto University Sep 01 2004 - Jul 31 2008

Finland

postdoc, Marie Curie Fellow :: Laboratory of Physics/Laboratory of Computational Engendering

Uniwersytet Jagiellonski w Krakowie Oct 01 1999 - Oct 30 2004

Poland

ASSISTANT, ADJUNCT :: Department of Biophysics

Education History

Uniwersytet Jagiellonski w Krakowie Oct 01 1996 - Sep 26 2000

Poland

PHD :: Faculty of Biology and Erth Science

Uniwersytet Jagiellonski w Krakowie Oct 01 1991 - Jun 11 1996

Poland

MSC :: Faculty of Biology nad Erth Sciences

Publications

Aline A Oliveira, Tomasz Róg, Albérico B F da Silva, Rommie E Amaro, Mark S Johnson, Pekka A Postila
Examining the Effect of Charged Lipids on Mitochondrial Outer Membrane Dynamics Using Atomistic Simulations. Biomolecules 12 (2) (2022)
Tomasz Róg, Mykhailo Girych, Alex Bunker
Mechanistic Understanding from Molecular Dynamics in Pharmaceutical Research 2: Lipid Membrane in Drug Design. Pharmaceuticals (Basel, Switzerland) 14 (10) (2021)
Cecilia Cannarozzo, Senem Merve Fred, Mykhailo Girych, Caroline Biojone, Giray Enkavi, Tomasz Róg, Ilpo Vattulainen, Plinio Cabrera Casarotto, Eero Castren
Cholesterol-recognition motifs in the transmembrane domain of the tyrosine kinase receptor family: The case of TRKB. The European journal of neuroscience 53 (10) (2021)
Mohammad Mahmoudzadeh, Aniket Magarkar, Artturi Koivuniemi, Tomasz Róg, Alex Bunker
Mechanistic Insight into How PEGylation Reduces the Efficacy of pH-Sensitive Liposomes from Molecular Dynamics Simulations. Molecular pharmaceutics 18 (7) (2021)
Gari Kasparyan, Chetan S Poojari, Tomasz Róg, Jochen S Hub
Cooperative Effects of an Antifungal Moiety and DMSO on Pore Formation over Lipid Membranes Revealed by Free Energy Calculations. The journal of physical chemistry. B 124 (40) (2020)
Chetan S Poojari, Agata Zak, Monika Dzieciuch-Rojek, Alex Bunker, Mariusz Kępczyński, Tomasz Róg
Cholesterol Reduces Partitioning of Antifungal Drug Itraconazole into Lipid Bilayers. The journal of physical chemistry. B 124 (11) (2020)
W Patrick Walters, Riccardo Provenzani, Artturi Koivuniemi, Waldemar Kulig, Virpi Talman, Tomasz Róg, Raimo K Tuominen, Jari T Yli-Kauhaluoma, Alex Bunker
Rigorous Computational Study Reveals What Docking Overlooks: Double Trouble from Membrane Association in Protein Kinase C Modulators. Journal of chemical information and modeling 60 (11) (2020)
Antonios Chronopoulos, Stephen D Thorpe, Ernesto Cortes, Dariusz Lachowski, Alistair J Rice, Vasyl V Mykuliak, Tomasz Róg, David A Lee, Vesa Pekka Hytönen, Armando Del Rio Hernandez
Syndecan-4 tunes cell mechanics by activating the kindlin-integrin-RhoA pathway. Nature materials 19 (6) (2020)
Fabio Lolicato, Hanna Juhola, Agata Zak, Pekka A Postila, Annina Saukko, Sami Rissanen, Giray Enkavi, Ilpo Vattulainen, Mariusz Kępczyński, Tomasz Róg
Membrane-Dependent Binding and Entry Mechanism of Dopamine into Its Receptor. ACS chemical neuroscience 11 (13) (2020)
Agnieszka Olżyńska, Waldemar Kulig, Heikki Mikkolainen, Tomasz Czerniak, Piotr Jurkiewicz, Lukasz Cwiklik, Tomasz Róg, Martin Hof, Pavel Jungwirth, Ilpo Vattulainen
Tail-Oxidized Cholesterol Enhances Membrane Permeability for Small Solutes. Langmuir : the ACS journal of surfaces and colloids 36 (35) (2020)
Pekka A Postila, Tomasz Róg
A Perspective: Active Role of Lipids in Neurotransmitter Dynamics. Molecular neurobiology 57 (2) (2019)
Waldemar Kulig, Hanna Korolainen, Maria Zatorska, Urszula Kwolek, Pawel Wydro, Mariusz Kępczyński, Tomasz Róg
Complex Behavior of Phosphatidylcholine-Phosphatidic Acid Bilayers and Monolayers: Effect of Acyl Chain Unsaturation. Langmuir : the ACS journal of surfaces and colloids 35 (17) (2019)
Bozena Augustyn, Piotr Stepien, Chetan Poojari, Edouard Mobarak, Agnieszka Polit, Anna Wisniewska-Becker, Tomasz Róg
Cholesteryl Hemisuccinate Is Not a Good Replacement for Cholesterol in Lipid Nanodiscs. The journal of physical chemistry. B 123 (46) (2019)
Giray Enkavi, Matti Javanainen, Waldemar Kulig, Tomasz Róg, Ilpo Vattulainen
Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance. Chemical reviews 119 (9) (2019)
Waldemar Kulig, Heikki Mikkolainen, Agnieszka Olżyńska, Piotr Jurkiewicz, Lukasz Cwiklik, Martin Hof, Ilpo Vattulainen, Pavel Jungwirth, Tomasz Róg
Bobbing of Oxysterols: Molecular Mechanism for Translocation of Tail-Oxidized Sterols through Biological Membranes. The journal of physical chemistry letters 9 (5) (2018)
Michael C Owen, Waldemar Kulig, Tomasz Róg, Ilpo Vattulainen, Birgit Strodel
Cholesterol Protects the Oxidized Lipid Bilayer from Water Injury: An All-Atom Molecular Dynamics Study. The Journal of membrane biology 251 (3) (2018)
Sini Mokkila, Pekka A Postila, Sami Rissanen, Hanna Juhola, Ilpo Vattulainen, Tomasz Róg
Calcium Assists Dopamine Release by Preventing Aggregation on the Inner Leaflet of Presynaptic Vesicles. ACS chemical neuroscience 8 (6) (2017)
Eva Bilkova, Roman Pleskot, Sami Rissanen, Simou Sun, Aleksander Czogalla, Lukasz Cwiklik, Tomasz Róg, Ilpo Vattulainen, Paul S Cremer, Pavel Jungwirth, Ünal Coskun
Calcium Directly Regulates Phosphatidylinositol 4,5-Bisphosphate Headgroup Conformation and Recognition. Journal of the American Chemical Society 139 (11) (2017)
Monika Dzieciuch-Rojek, Chetan Poojari, Jan Bednar, Alex Bunker, Bartłomiej Kozik, Maria Nowakowska, Ilpo Vattulainen, Paweł Wydro, Mariusz Kępczyński, Tomasz Róg
Effects of Membrane PEGylation on Entry and Location of Antifungal Drug Itraconazole and Their Pharmacological Implications. Molecular pharmaceutics 14 (4) (2017)
Liliya Euro, Outi Haapanen, Tomasz Róg, Ilpo Vattulainen, Anu Suomalainen, Vivek Sharma
Atomistic Molecular Dynamics Simulations of Mitochondrial DNA Polymerase γ: Novel Mechanisms of Function and Pathogenesis. Biochemistry 56 (9) (2017)
Anirban Polley, Adam Orłowski, Reinis Danne, Andrey A Gurtovenko, Jorge Bernardino de La Serna, Christian Eggeling, Simon J Davis, Tomasz Róg, Ilpo Vattulainen
Glycosylation and Lipids Working in Concert Direct CD2 Ectodomain Orientation and Presentation. The journal of physical chemistry letters 8 (5) (2017)
Reinis Danne, Chetan Poojari, Hector Martinez-Seara, Sami Rissanen, Fabio Lolicato, Tomasz Róg, Ilpo Vattulainen
doGlycans-Tools for Preparing Carbohydrate Structures for Atomistic Simulations of Glycoproteins, Glycolipids, and Carbohydrate Polymers for GROMACS. Journal of chemical information and modeling 57 (10) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Tomasz Róg (Tomasz Rog)