Vivek Sharma

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 24

Top Topics

Molecular Dynamics Simulations

Recombinant Human

High Resolution

Mitochondrial Dna

Top Venues

Science advances

Proceedings of the National Academy of Sciences of the United States of America

The journal of physical chemistry. B

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Bobin George Abraham, Teemu Haikarainen, Joni Vuorio, Mykhailo Girych, Anniina T Virtanen, Antti Kurttila, Christos Karathanasis, Mike Heilemann, Vivek Sharma, Ilpo Vattulainen, Olli Silvennoinen
Molecular basis of JAK2 activation in erythropoietin receptor and pathogenic JAK2 signaling. Science advances 10 (10) (2024)
Amina Djurabekova, Jonathan Lasham, Oleksii Zdorevskyi, Volker Zickermann, Vivek Sharma
Long-range electron proton coupling in respiratory complex I - insights from molecular simulations of the quinone chamber and antiporter-like subunits. The Biochemical journal 481 (7) (2024)
Bobin George Abraham, Teemu Haikarainen, Joni Vuorio, Mykhailo Girych, Anniina T Virtanen, Antti Kurttila, Christos Karathanasis, Mike Heilemann, Vivek Sharma, Ilpo Vattulainen, Olli Silvennoinen
Molecular basis of JAK2 activation in erythropoietin receptor and pathogenic JAK2 signaling. Science advances 10 (10) (2024)
Jonathan Lasham, Amina Djurabekova, Volker Zickermann, Janet Vonck, Vivek Sharma
Role of Protonation States in the Stability of Molecular Dynamics Simulations of High-Resolution Membrane Protein Structures. The journal of physical chemistry. B 128 (10) (2024)
Bobin George Abraham, Teemu Haikarainen, Joni Vuorio, Mykhailo Girych, Anniina T Virtanen, Antti Kurttila, Christos Karathanasis, Mike Heilemann, Vivek Sharma, Ilpo Vattulainen, Olli Silvennoinen
Molecular basis of JAK2 activation in erythropoietin receptor and pathogenic JAK2 signaling. Science advances 10 (10) (2024)
Jonathan Lasham, Amina Djurabekova, Volker Zickermann, Janet Vonck, Vivek Sharma
Role of Protonation States in the Stability of Molecular Dynamics Simulations of High-Resolution Membrane Protein Structures. The journal of physical chemistry. B 128 (10) (2024)
Jonathan Lasham, Amina Djurabekova, Volker Zickermann, Janet Vonck, Vivek Sharma
Role of Protonation States in the Stability of Molecular Dynamics Simulations of High-Resolution Membrane Protein Structures. The journal of physical chemistry. B (2024)
Bobin George Abraham, Teemu Haikarainen, Joni Vuorio, Mykhailo Girych, Anniina T Virtanen, Antti Kurttila, Christos Karathanasis, Mike Heilemann, Vivek Sharma, Ilpo Vattulainen, Olli Silvennoinen
Molecular basis of JAK2 activation in erythropoietin receptor and pathogenic JAK2 signaling. Science advances 10 (10) (2024)
Oleksii Zdorevskyi, Amina Djurabekova, Jonathan Lasham, Vivek Sharma
Horizontal proton transfer across the antiporter-like subunits in mitochondrial respiratory complex I. Chemical science 14 (23) (2023)
Alexander Mühleip, Rasmus Kock Flygaard, Rozbeh Baradaran, Outi Haapanen, Thomas Gruhl, Victor Tobiasson, Amandine Maréchal, Vivek Sharma, Alexey Amunts
Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex. Nature (2023)
Yongchan Lee, Outi Haapanen, Anton Altmeyer, Werner Kühlbrandt, Vivek Sharma, Volker Zickermann
Ion transfer mechanisms in Mrp-type antiporters from high resolution cryoEM and molecular dynamics simulations. Nature communications 13 (1) (2022)
Mårten Wikström, Amina Djurabekova, Vivek Sharma
On the role of ubiquinone in the proton translocation mechanism of respiratory complex I. FEBS letters (2022)
Amina Djurabekova, Etienne Galemou Yoga, Aino Nyman, Antti Pirttikoski, Volker Zickermann, Outi Haapanen, Vivek Sharma
Docking and molecular simulations reveal a quinone-binding site on the surface of respiratory complex I. FEBS letters 596 (9) (2022)
Kristian Parey, Jonathan Lasham, Deryck J Mills, Amina Djurabekova, Outi Haapanen, Etienne Galemou Yoga, Hao Xie, Werner Kühlbrandt, Vivek Sharma, Janet Vonck, Volker Zickermann
High-resolution structure and dynamics of mitochondrial complex I-Insights into the proton pumping mechanism. Science advances 7 (46) (2021)
Patryk Kuleta, Jonathan Lasham, Marcin Sarewicz, Iwona Ekiert, Vivek Sharma, Robert Ekiert, Artur Osyczka
Hydrogen bonding rearrangement by a mitochondrial disease mutation in cytochrome bc1 perturbs heme bH redox potential and spin state. Proceedings of the National Academy of Sciences of the United States of America 118 (33) (2021)
Etienne Galemou Yoga, Kristian Parey, Amina Djurabekova, Outi Haapanen, Karin Siegmund, Klaus Zwicker, Vivek Sharma, Volker Zickermann, Heike Angerer
Essential role of accessory subunit LYRM6 in the mechanism of mitochondrial complex I. Nature communications 11 (1) (2020)
Cory D Dunn, Bala Ani Akpinar, Vivek Sharma
An Unusual Amino Acid Substitution Within Hummingbird Cytochrome c Oxidase Alters a Key Proton-Conducting Channel. G3 (Bethesda, Md.) 10 (7) (2020)
Stephan Wilmes, Maximillian Hafer, Joni Vuorio, Julie A Tucker, Hauke Winkelmann, Sara Löchte, Tess A Stanly, Katiuska D Pulgar Prieto, Chetan S Poojari, Vivek Sharma, Christian P Richter, Rainer Kurre, Stevan R Hubbard, K Christopher Garcia, Ignacio Moraga, Ilpo Vattulainen, Ian S Hitchcock, Jacob Piehler
Mechanism of homodimeric cytokine receptor activation and dysregulation by oncogenic mutations. Science (New York, N.Y.) 367 (6478) (2020)
Kristian Parey, Outi Haapanen, Vivek Sharma, Harald C Köfeler, Thomas Züllig, Simone Prinz, Karin Siegmund, Ilka Wittig, Deryck J Mills, Janet Vonck, Werner Kühlbrandt, Volker Zickermann
High-resolution cryo-EM structures of respiratory complex I: Mechanism, assembly, and disease. Science advances 5 (12) (2019)
Judith Warnau, Vivek Sharma, Ana P Gamiz-Hernandez, Andrea Di Luca, Outi Haapanen, Ilpo Vattulainen, Mårten Wikström, Gerhard Hummer, Ville R I Kaila
Redox-coupled quinone dynamics in the respiratory complex I. Proceedings of the National Academy of Sciences of the United States of America 115 (36) (2018)
Mårten Wikström, Klaas Krab, Vivek Sharma
Oxygen Activation and Energy Conservation by Cytochrome c Oxidase. Chemical reviews 118 (5) (2018)
Outi Haapanen, Vivek Sharma
Role of water and protein dynamics in proton pumping by respiratory complex I. Scientific reports 7 (1) (2017)
Liliya Euro, Outi Haapanen, Tomasz Róg, Ilpo Vattulainen, Anu Suomalainen, Vivek Sharma
Atomistic Molecular Dynamics Simulations of Mitochondrial DNA Polymerase γ: Novel Mechanisms of Function and Pathogenesis. Biochemistry 56 (9) (2017)
Vivek Sharma, Pablo G Jambrina, Markus Kaukonen, Edina Rosta, Peter R Rich
Insights into functions of the H channel of cytochrome c oxidase from atomistic molecular dynamics simulations. Proceedings of the National Academy of Sciences of the United States of America 114 (48) (2017)