Travis Gagie

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 19

Top Topics

Convolutional Neural Network

Top Venues

International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium)

bioRxiv : the preprint server for biology

LIPIcs : Leibniz international proceedings in informatics

Developments in language theory. Conference on Developments in Language Theory

This page only lists publications with an associated author ORCID identifier.

Publications

Travis Gagie
How to Find Long Maximal Exact Matches and Ignore Short Ones. Developments in language theory. Conference on Developments in Language Theory 14791 (2024)
Travis Gagie
How to Find Long Maximal Exact Matches and Ignore Short Ones. Developments in language theory. Conference on Developments in Language Theory 14791 (2024)
Lore Depuydt, Luca Renders, Simon Van de Vyver, Lennart Veys, Travis Gagie, Jan Fostier
b-move: faster bidirectional character extensions in a run-length compressed index. bioRxiv : the preprint server for biology (2024)
Lore Depuydt, Luca Renders, Simon Van de Vyver, Lennart Veys, Travis Gagie, Jan Fostier
b-move: faster bidirectional character extensions in a run-length compressed index. bioRxiv : the preprint server for biology (2024)
Lore Depuydt, Luca Renders, Simon Van de Vyver, Lennart Veys, Travis Gagie, Jan Fostier
b-move: faster bidirectional character extensions in a run-length compressed index. bioRxiv : the preprint server for biology (2024)
Travis Gagie
How to Find Long Maximal Exact Matches and Ignore Short Ones. Developments in language theory. Conference on Developments in Language Theory 14791 (2024)
Lore Depuydt, Luca Renders, Simon Van de Vyver, Lennart Veys, Travis Gagie, Jan Fostier
b-move: faster bidirectional character extensions in a run-length compressed index. bioRxiv : the preprint server for biology (2024)
Nicola Cotumaccio, Travis Gagie, Dominik Köppl, Nicola Prezza
Space-time Trade-offs for the LCP Array of Wheeler DFAs. International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium) 14240 (2023)
Nicola Cotumaccio, Travis Gagie, Dominik Köppl, Nicola Prezza
Space-time Trade-offs for the LCP Array of Wheeler DFAs. International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium) 14240 (2023)
Mohsen Zakeri, Nathaniel K Brown, Omar Y Ahmed, Travis Gagie, Ben Langmead
Movi: a fast and cache-efficient full-text pangenome index. bioRxiv : the preprint server for biology (2023)
Paola Bonizzoni, Christina Boucher, Davide Cozzi, Travis Gagie, Dominik Köppl, Massimiliano Rossi
Data Structures for SMEM-Finding in the PBWT. International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium) 14240 (2023)
Paola Bonizzoni, Christina Boucher, Davide Cozzi, Travis Gagie, Dominik Köppl, Massimiliano Rossi
Data Structures for SMEM-Finding in the PBWT. International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium) 14240 (2023)
Paola Bonizzoni, Christina Boucher, Davide Cozzi, Travis Gagie, Dominik Köppl, Massimiliano Rossi
Data Structures for SMEM-Finding in the PBWT. International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium) 14240 (2023)
Nicola Cotumaccio, Travis Gagie, Dominik Köppl, Nicola Prezza
Space-time Trade-offs for the LCP Array of Wheeler DFAs. International Symposium on String Processing and Information Retrieval : SPIRE ... : proceedings. SPIRE (Symposium) 14240 (2023)
Nathaniel K Brown, Travis Gagie, Massimiliano Rossi
RLBWT Tricks. LIPIcs : Leibniz international proceedings in informatics 233 (2022)
Massimiliano Rossi, Marco Oliva, Paola Bonizzoni, Ben Langmead, Travis Gagie, Christina Boucher
Finding Maximal Exact Matches Using the r-Index. Journal of computational biology : a journal of computational molecular cell biology 29 (2) (2022)
Nathaniel K Brown, Travis Gagie, Massimiliano Rossi
RLBWT Tricks. LIPIcs : Leibniz international proceedings in informatics 233 (2022)
Massimiliano Rossi, Marco Oliva, Ben Langmead, Travis Gagie, Christina Boucher
MONI: A Pangenomic Index for Finding Maximal Exact Matches. Journal of computational biology : a journal of computational molecular cell biology 29 (2) (2022)
Nathaniel K Brown, Travis Gagie, Massimiliano Rossi
RLBWT Tricks. LIPIcs : Leibniz international proceedings in informatics 233 (2022)