Václav Brázda (Vaclav Brázda, Vaclav Brazda)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 43

Top Topics

Binding Protein

Saccharomyces Cerevisiae

Top Venues

International journal of molecular sciences

Bioscience reports

Angewandte Chemie (International ed. in English)

This page only lists publications with an associated author ORCID identifier.

Publications

Martin Bartas, Václav Brázda, Petr Pečinka
Special Issue "Bioinformatics of Unusual DNA and RNA Structures". International journal of molecular sciences 25 (10) (2024)
Martin Bartas, Václav Brázda, Petr Pečinka
Special Issue "Bioinformatics of Unusual DNA and RNA Structures". International journal of molecular sciences 25 (10) (2024)
Václav Brázda, Natália Valková, Michaela Dobrovolná, Jean-Louis Mergny
Abundance of G-Quadruplex Forming Sequences in the Hepatitis Delta Virus Genomes. ACS omega 9 (3) (2024)
Martin Gajarsky, Petr Stadlbauer, Jiřı Šponer, Anne Cucchiarini, Michaela Dobrovolna, Václav Brázda, Jean-Louis Mergny, Lukas Trantirek, Martina Lenarčič Živković
DNA Quadruplex Structure with a Unique Cation Dependency. Angewandte Chemie (International ed. in English) 63 (7) (2024)
Václav Brázda, Natália Valková, Michaela Dobrovolná, Jean-Louis Mergny
Abundance of G-Quadruplex Forming Sequences in the Hepatitis Delta Virus Genomes. ACS omega 9 (3) (2024)
Martin Gajarsky, Petr Stadlbauer, Jiřı Šponer, Anne Cucchiarini, Michaela Dobrovolna, Václav Brázda, Jean-Louis Mergny, Lukas Trantirek, Martina Lenarčič Živković
DNA Quadruplex Structure with a Unique Cation Dependency. Angewandte Chemie (International ed. in English) 63 (7) (2024)
Václav Brázda, Lucie Šislerová, Anne Cucchiarini, Jean-Louis Mergny
G-quadruplex propensity in H. neanderthalensis , H. sapiens and Denisovans mitochondrial genomes. NAR genomics and bioinformatics 6 (2) (2024)
Václav Brázda, Lucie Šislerová, Anne Cucchiarini, Jean-Louis Mergny
G-quadruplex propensity in H. neanderthalensis , H. sapiens and Denisovans mitochondrial genomes. NAR genomics and bioinformatics 6 (2) (2024)
Martin Gajarsky, Petr Stadlbauer, Jiřı Šponer, Anne Cucchiarini, Michaela Dobrovolna, Václav Brázda, Jean-Louis Mergny, Lukas Trantirek, Martina Lenarčič Živković
DNA Quadruplex Structure with a Unique Cation Dependency. Angewandte Chemie (International ed. in English) 63 (7) (2024)
Libuše Kratochvilová, Matúš Vojsovič, Natália Valková, Lucie Šislerová, Zeinab El Rashed, Alberto Inga, Paola Monti, Václav Brázda
The presence of a G-quadruplex prone sequence upstream of a minimal promoter increases transcriptional activity in the yeast Saccharomyces cerevisiae. Bioscience reports 43 (12) (2023)
Libuše Kratochvilová, Matúš Vojsovič, Natália Valková, Lucie Šislerová, Zeinab El Rashed, Alberto Inga, Paola Monti, Václav Brázda
The presence of a G-quadruplex prone sequence upstream of a minimal promoter increases transcriptional activity in the yeast Saccharomyces cerevisiae. Bioscience reports 43 (12) (2023)
Petr Pečinka, Natália Valková, Adriana Volná, Kristýna Kundrátová, Václav Brázda, Martin Bartas
Analysis of G-Quadruplex-Forming Sequences in Drought Stress-Responsive Genes, and Synthesis Genes of Phenolic Compounds in Arabidopsis thaliana . Life (Basel, Switzerland) 13 (1) (2023)
Stefan Bidula, Václav Brázda
Genomic Analysis of Non-B Nucleic Acids Structures in SARS-CoV-2: Potential Key Roles for These Structures in Mutability, Translation, and Replication? Genes 14 (1) (2023)
Václav Brázda, Michaela Dobrovolná, Natália Bohálová, Jean-Louis Mergny
G-quadruplexes in the evolution of hepatitis B virus. Nucleic acids research (2023)
Stefan Bidula, Václav Brázda
Genomic Analysis of Non-B Nucleic Acids Structures in SARS-CoV-2: Potential Key Roles for These Structures in Mutability, Translation, and Replication? Genes 14 (1) (2023)
Libuše Kratochvilová, Matúš Vojsovič, Natália Valková, Lucie Šislerová, Zeinab El Rashed, Alberto Inga, Paola Monti, Václav Brázda
The presence of a G-quadruplex prone sequence upstream of a minimal promoter increases transcriptional activity in the yeast Saccharomyces cerevisiae. Bioscience reports 43 (12) (2023)
Petr Pečinka, Natália Valková, Adriana Volná, Kristýna Kundrátová, Václav Brázda, Martin Bartas
Analysis of G-Quadruplex-Forming Sequences in Drought Stress-Responsive Genes, and Synthesis Genes of Phenolic Compounds in Arabidopsis thaliana . Life (Basel, Switzerland) 13 (1) (2023)
Libuše Kratochvilová, Matúš Vojsovič, Natália Valková, Lucie Šislerová, Zeinab El Rashed, Alberto Inga, Paola Monti, Václav Brázda
The presence of a G-quadruplex prone sequence upstream of a minimal promoter increases transcriptional activity in the yeast Saccharomyces cerevisiae. Bioscience reports 43 (12) (2023)
Stefan Bidula, Václav Brázda
Genomic Analysis of Non-B Nucleic Acids Structures in SARS-CoV-2: Potential Key Roles for These Structures in Mutability, Translation, and Replication? Genes 14 (1) (2023)
Otília Porubiaková, Jan Havlík, null Indu, Michal Šedý, Veronika Přepechalová, Martin Bartas, Stefan Bidula, Jiří Šťastný, Miroslav Fojta, Václav Brázda
Variability of Inverted Repeats in All Available Genomes of Bacteria. Microbiology spectrum (2023)
Petr Pečinka, Natália Valková, Adriana Volná, Kristýna Kundrátová, Václav Brázda, Martin Bartas
Analysis of G-Quadruplex-Forming Sequences in Drought Stress-Responsive Genes, and Synthesis Genes of Phenolic Compounds in Arabidopsis thaliana . Life (Basel, Switzerland) 13 (1) (2023)
Martin Gajarsky, Petr Stadlbauer, Jiřı Šponer, Anne Cucchiarini, Michaela Dobrovolna, Václav Brázda, Jean-Louis Mergny, Lukas Trantirek, Martina Lenarčič Živković
DNA Quadruplex Structure with a Unique Cation Dependency. Angewandte Chemie (International ed. in English) (2023)
Stefan Bidula, Václav Brázda
Genomic Analysis of Non-B Nucleic Acids Structures in SARS-CoV-2: Potential Key Roles for These Structures in Mutability, Translation, and Replication? Genes 14 (1) (2023)
Lucille Ferret, Karla Alvarez-Valadez, Jennifer Rivière, Alexandra Muller, Natalia Bohálová, Luo Yu, Lionel Guittat, Václav Brázda, Guido Kroemer, Jean-Louis Mergny, Mojgan Djavaheri-Mergny
G-quadruplex ligands as potent regulators of lysosomes. Autophagy (2023)
Martin Bartas, Kristyna Slychko, Václav Brázda, Jiří Červeň, Christopher A Beaudoin, Thomas L Blundell, Petr Pečinka
Searching for New Z-DNA/Z-RNA Binding Proteins Based on Structural Similarity to Experimentally Validated Zα Domain. International journal of molecular sciences 23 (2) (2022)
Richard P Bowater, Václav Brázda
Impacts of Molecular Structure on Nucleic Acid-Protein Interactions. International journal of molecular sciences 24 (1) (2022)
Richard P Bowater, Václav Brázda
Impacts of Molecular Structure on Nucleic Acid-Protein Interactions. International journal of molecular sciences 24 (1) (2022)
Richard P Bowater, Václav Brázda
Impacts of Molecular Structure on Nucleic Acid-Protein Interactions. International journal of molecular sciences 24 (1) (2022)
Richard P Bowater, Natália Bohálová, Václav Brázda
Interaction of Proteins with Inverted Repeats and Cruciform Structures in Nucleic Acids. International journal of molecular sciences 23 (11) (2022)
Michaela Dobrovolná, Natália Valková, Vratislav Peska, Jiawei Wang, Yu Luo, Martin Bartas, Adriana Volná, Jean-Louis Mergny, Václav Brázda
The Newly Sequenced Genome of Pisum sativum Is Replete with Potential G-Quadruplex-Forming Sequences-Implications for Evolution and Biological Regulation. International journal of molecular sciences 23 (15) (2022)
Natália Valková, Alessio Cantara, Martin Bartas, Patrik Kaura, Jiří Šťastný, Petr Pečinka, Miroslav Fojta, Václav Brázda
Tracing dsDNA Virus-Host Coevolution through Correlation of Their G-Quadruplex-Forming Sequences. International journal of molecular sciences 22 (7) (2021)
Václav Brázda, Jan Havlík, Jan Kolomazník, Oldřich Trenz, Jiří Šťastný
R-Loop Tracker: Web Access-Based Tool for R-Loop Detection and Analysis in Genomic DNA Sequences. International journal of molecular sciences 22 (23) (2021)
Martin Bartas, Václav Brázda, Adriana Volná, Jiří Červeň, Petr Pečinka, Joanna E Zawacka-Pankau
The Changes in the p53 Protein across the Animal Kingdom Point to Its Involvement in Longevity. International journal of molecular sciences 22 (16) (2021)
Paola Menichini, Václav Brázda, Natália Valková, Otilia Porubiaková, Paola Menichini, Andrea Speciale, Renata Bocciardi, Alberto Inga, Gilberto Fronza
Evaluating the Influence of a G-Quadruplex Prone Sequence on the Transactivation Potential by Wild-Type and/or Mutant P53 Family Proteins through a Yeast-Based Functional Assay. Genes 12 (2) (2021)
Václav Brázda, Yu Luo, Martin Bartas, Patrik Kaura, Otilia Porubiaková, Jiří Šťastný, Petr Pečinka, Daniela Verga, Violette Da Cunha, Tomio S Takahashi, Patrick Forterre, Hannu Myllykallio, Miroslav Fojta, Jean-Louis Mergny
G-Quadruplexes in the Archaea Domain. Biomolecules 10 (9) (2020)
Martin Bartas, Václav Brázda, Jiří Červeň, Petr Pečinka
Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa. International journal of molecular sciences 21 (1) (2019)
Martin Bartas, Michaela Čutová, Václav Brázda, Patrik Kaura, Jiří Šťastný, Jan Kolomazník, Jan Coufal, Pratik Goswami, Jiří Červeň, Petr Pečinka
The Presence and Localization of G-Quadruplex Forming Sequences in the Domain of Bacteria. Molecules (Basel, Switzerland) 24 (9) (2019)
Václav Brázda, Miroslav Fojta
The Rich World of p53 DNA Binding Targets: The Role of DNA Structure. International journal of molecular sciences 20 (22) (2019)
Otilia Porubiaková, Natália Bohálová, Alberto Inga, Natália Vadovičová, Jan Coufal, Miroslav Fojta, Václav Brázda
The Influence of Quadruplex Structure in Proximity to P53 Target Sequences on the Transactivation Potential of P53 Alpha Isoforms. International journal of molecular sciences 21 (1) (2019)
Václav Brázda, Jan Coufal
Correction: Brázda, V. and Coufal, J. Recognition of Local DNA Structures by p53 Protein. Int. J. Mol. Sci. 2017, 18, 375. International journal of molecular sciences 19 (9) (2018)
Václav Brázda, Jiří Červeň, Martin Bartas, Nikol Mikysková, Jan Coufal, Petr Pečinka
The Amino Acid Composition of Quadruplex Binding Proteins Reveals a Shared Motif and Predicts New Potential Quadruplex Interactors. Molecules (Basel, Switzerland) 23 (9) (2018)
Jana Čechová, Jan Coufal, Eva B Jagelská, Miroslav Fojta, Václav Brázda
p73, like its p53 homolog, shows preference for inverted repeats forming cruciforms. PloS one 13 (4) (2018)
Václav Brázda, Jiří Lýsek, Martin Bartas, Miroslav Fojta
Complex Analyses of Short Inverted Repeats in All Sequenced Chloroplast DNAs. BioMed research international 2018 (2018)