Vadim Backman

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 19

Top Venues

PloS one

Science advances

Nature communications

bioRxiv : the preprint server for biology

Robert H. Lurie Comprehensive Cancer Center

Harvard-MIT Division of Health Sciences and Technology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Robert H. Lurie Comprehensive Cancer Center

United States

Program Leader :: Cancer and Physical Sciences

Northwestern University

United States

Walter Dill Scott Professor :: Biomedical Engineering

Education History

Harvard-MIT Division of Health Sciences and Technology

United States

PHD

Publications

Md Shahin Alom, Ali Daneshkhah, Nicolas Acosta, Nick Anthony, Emily Pujadas Liwag, Vadim Backman, Sunil Kumar Gaire
Deep Learning-driven Automatic Nuclei Segmentation of Label-free Live Cell Chromatin-sensitive Partial Wave Spectroscopic Microscopy Imaging. bioRxiv : the preprint server for biology (2024)
Anne R Shim, Jane Frederick, Emily M Pujadas, Tiffany Kuo, I Chae Ye, Joshua A Pritchard, Cody L Dunton, Paola Carrillo Gonzalez, Nicolas Acosta, Surbhi Jain, Nicholas M Anthony, Luay Matthew Almassalha, Igal Szleifer, Vadim Backman
Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure. PloS one 19 (5) (2024)
Aayush Kant, Zixian Guo, Vinayak Vinayak, Maria Victoria Neguembor, Wing Shun Li, Vasundhara Agrawal, Emily Pujadas, Luay Matthew Almassalha, Vadim Backman, Melike Lakadamyali, Maria Pia Cosma, Vivek B Shenoy
Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization. Nature communications 15 (1) (2024)
Aayush Kant, Zixian Guo, Vinayak Vinayak, Maria Victoria Neguembor, Wing Shun Li, Vasundhara Agrawal, Emily Pujadas, Luay Matthew Almassalha, Vadim Backman, Melike Lakadamyali, Maria Pia Cosma, Vivek B Shenoy
Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization. Nature communications 15 (1) (2024)
Aayush Kant, Zixian Guo, Vinayak Vinayak, Maria Victoria Neguembor, Wing Shun Li, Vasundhara Agrawal, Emily Pujadas, Luay Matthew Almassalha, Vadim Backman, Melike Lakadamyali, Maria Pia Cosma, Vivek B Shenoy
Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization. Nature communications 15 (1) (2024)
Emily M Pujadas, Nicolas Acosta, Luay Matthew Almassalha, Yuanzhe Patrick Su, Ruyi Gong, Masato T Kanemaki, Andrew D Stephens, Vadim Backman
Nuclear blebs are associated with destabilized chromatin packing domains. bioRxiv : the preprint server for biology (2024)
Anne R Shim, Jane Frederick, Emily M Pujadas, Tiffany Kuo, I Chae Ye, Joshua A Pritchard, Cody L Dunton, Paola Carrillo Gonzalez, Nicolas Acosta, Surbhi Jain, Nicholas M Anthony, Luay Matthew Almassalha, Igal Szleifer, Vadim Backman
Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure. PloS one 19 (5) (2024)
Anne R Shim, Jane Frederick, Emily M Pujadas, Tiffany Kuo, I Chae Ye, Joshua A Pritchard, Cody L Dunton, Paola Carrillo Gonzalez, Nicolas Acosta, Surbhi Jain, Nicholas M Anthony, Luay Matthew Almassalha, Igal Szleifer, Vadim Backman
Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure. PloS one 19 (5) (2024)
Anne R Shim, Jane Frederick, Emily M Pujadas, Tiffany Kuo, I Chae Ye, Joshua A Pritchard, Cody L Dunton, Paola Carrillo Gonzalez, Nicolas Acosta, Surbhi Jain, Nicholas M Anthony, Luay Matthew Almassalha, Igal Szleifer, Vadim Backman
Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure. PloS one 19 (5) (2024)
Anne R Shim, Jane Frederick, Emily M Pujadas, Tiffany Kuo, I Chae Ye, Joshua A Pritchard, Cody L Dunton, Paola Carrillo Gonzalez, Nicolas Acosta, Surbhi Jain, Nicholas M Anthony, Luay Matthew Almassalha, Igal Szleifer, Vadim Backman
Formamide denaturation of double-stranded DNA for fluorescence in situ hybridization (FISH) distorts nanoscale chromatin structure. PloS one 19 (5) (2024)
Guillermo A Ameer, Vasundhara Agrawal, Cody L Dunton, Yugang Liu, Ranya K A Virk, Priyam A Patel, Lucas Carter, Emily M Pujadas, Yue Li, Surbhi Jain, Hao Wang, Na Ni, Hsiu-Ming Tsai, Nancy Rivera-Bolanos, Jane Frederick, Eric Roth, Reiner Bleher, Chongwen Duan, Panagiotis Ntziachristos, Tong Chuan He, Russell R Reid, Bin Jiang, Hariharan Subramanian, Vadim Backman, Guillermo A Ameer
Chromatin reprogramming and bone regeneration in vitro and in vivo via the microtopography-induced constriction of cell nuclei. Nature biomedical engineering (2023)
Ali Daneshkhah, Vasundhara Agrawal, Adam Eshein, Hariharan Subramanian, Hemant Kumar Roy, Vadim Backman
Correction: Evidence for possible association of vitamin D status with cytokine storm and unregulated inflammation in COVID-19 patients. Aging clinical and experimental research (2023)
Emily M Pujadas, Xiaolong Wei, Nicolas Acosta, Lucas Carter, Jiekun Yang, Luay Matthew Almassalha, Ali Daneshkhah, Suhas S P Rao, Vasundhara Agrawal, Fidan Seker-Polat, Erez Lieberman Aiden, Masato T Kanemaki, Vadim Backman, Mazhar Adli
Depletion of lamins B1 and B2 alters chromatin mobility and induces differential gene expression by a mesoscale-motion dependent mechanism. bioRxiv : the preprint server for biology (2023)
Yue Li, Adam Eshein, Ranya K A Virk, Aya Eid, Wenli Wu, Jane Frederick, David VanDerway, Scott Gladstein, Kai Huang, Anne R Shim, Nicholas M Anthony, Greta M Bauer, Xiang Zhou, Vasundhara Agrawal, Emily M Pujadas, Surbhi Jain, George Esteve, John E Chandler, The-Quyen Nguyen, Reiner Bleher, Juan J de Pablo, Igal Szleifer, Vinayak P Dravid, Luay Matthew Almassalha, Vadim Backman
Nanoscale chromatin imaging and analysis platform bridges 4D chromatin organization with molecular function. Science advances 7 (1) (2021)
Timothy D Swain, Simon Lax, Jack A Gilbert, Vadim Backman, Luisa A Marcelino
A Phylogeny-Informed Analysis of the Global Coral-Symbiodiniaceae Interaction Network Reveals that Traits Correlated with Thermal Bleaching Are Specific to Symbiont Transmission Mode. mSystems 6 (3) (2021)
Ali Daneshkhah, Vasundhara Agrawal, Adam Eshein, Hariharan Subramanian, Hemant Kumar Roy, Vadim Backman
Evidence for possible association of vitamin D status with cytokine storm and unregulated inflammation in COVID-19 patients. Aging clinical and experimental research 32 (10) (2020)
Kai Huang, Yue Li, Anne R Shim, Ranya K A Virk, Vasundhara Agrawal, Adam Eshein, Rikkert J Nap, Luay Matthew Almassalha, Vadim Backman, Igal Szleifer
Physical and data structure of 3D genome. Science advances 6 (2) (2020)
Ranya K A Virk, Wenli Wu, Luay Matthew Almassalha, Greta M Bauer, Yue Li, David VanDerway, Jane Frederick, Di Zhang, Adam Eshein, Hemant K Roy, Igal Szleifer, Vadim Backman
Disordered chromatin packing regulates phenotypic plasticity. Science advances 6 (2) (2020)
Scott Gladstein, Dhwanil Damania, Luay M Almassalha, Lauren T Smith, Varun Gupta, Hariharan Subramanian, Douglas K Rex, Hemant K Roy, Vadim Backman
Correlating colorectal cancer risk with field carcinogenesis progression using partial wave spectroscopic microscopy. Cancer medicine 7 (5) (2018)

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Publication Activity (10 Years)

Top Topics

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Vadim Backman