Vinicius Martins de Oliveira (Vinícius Martins de Oliveira, Vinícius M de Oliveira, Vinícius Martins de Oliveira, Vinícius M de Oliveira)

Scopus Author ID Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 16

Top Topics

Respiratory Syndrome Coronavirus

Single Molecule

Molecular Dynamics

Drug Administration

Top Venues

The journal of physical chemistry. B

bioRxiv : the preprint server for biology

Journal of chemical information and modeling

Living journal of computational molecular science

This page only lists publications with an associated author ORCID identifier.

Publications

Mohamed Ibrahim, Xinyuanyuan Sun, Vinicius Martins de Oliveira, Ruibin Liu, Joseph Clayton, Haifa El Kilani, Jana Shen, Rolf Hilgenfeld
Why is the Omicron main protease of SARS-CoV-2 less stable than its wild-type counterpart? A crystallographic, biophysical, and theoretical study of the free enzyme and its complex with inhibitor 13b-K. bioRxiv : the preprint server for biology (2024)
Mohamed Ibrahim, Xinyuanyuan Sun, Vinicius Martins de Oliveira, Ruibin Liu, Joseph Clayton, Haifa El Kilani, Jana Shen, Rolf Hilgenfeld
Why is the Omicron main protease of SARS-CoV-2 less stable than its wild-type counterpart? A crystallographic, biophysical, and theoretical study of the free enzyme and its complex with inhibitor 13b-K. bioRxiv : the preprint server for biology (2024)
Mohamed Ibrahim, Xinyuanyuan Sun, Vinicius Martins de Oliveira, Ruibin Liu, Joseph Clayton, Haifa El Kilani, Jana Shen, Rolf Hilgenfeld
Why is the Omicron main protease of SARS-CoV-2 less stable than its wild-type counterpart? A crystallographic, biophysical, and theoretical study of the free enzyme and its complex with inhibitor 13b-K. bioRxiv : the preprint server for biology (2024)
Mohamed Ibrahim, Xinyuanyuan Sun, Vinicius Martins de Oliveira, Ruibin Liu, Joseph Clayton, Haifa El Kilani, Jana Shen, Rolf Hilgenfeld
Why is the Omicron main protease of SARS-CoV-2 less stable than its wild-type counterpart? A crystallographic, biophysical, and theoretical study of the free enzyme and its complex with inhibitor 13b-K. bioRxiv : the preprint server for biology (2024)
Fernando Bruno da Silva, Vinicius Martins de Oliveira, Antonio Bento de Oliveira Junior, Vinícius de Godoi Contessoto, Ingrid B S Martins
Probing the Energy Landscape of Spectrin R15 and R16 and the Effects of Non-native Interactions. The journal of physical chemistry. B (2023)
Fernando Bruno da Silva, Vinicius Martins de Oliveira, Antonio Bento de Oliveira Junior, Vinícius de Godoi Contessoto, Ingrid B S Martins
Probing the Energy Landscape of Spectrin R15 and R16 and the Effects of Non-native Interactions. The journal of physical chemistry. B 127 (6) (2023)
Fernando Bruno da Silva, Vinicius Martins de Oliveira, Antonio Bento de Oliveira Junior, Vinícius de Godoi Contessoto, Ingrid B S Martins
Probing the Energy Landscape of Spectrin R15 and R16 and the Effects of Non-native Interactions. The journal of physical chemistry. B 127 (6) (2023)
Fernando Bruno da Silva, Vinicius Martins de Oliveira, Antonio Bento de Oliveira Junior, Vinícius de Godoi Contessoto, Ingrid B S Martins
Probing the Energy Landscape of Spectrin R15 and R16 and the Effects of Non-native Interactions. The journal of physical chemistry. B 127 (6) (2023)
Joseph Clayton, Vinicius Martins de Oliveira, Mohamed Fouad Ibrahim, Xinyuanyuan Sun, Paween Mahinthichaichan, Mingzhe Shen, Rolf Hilgenfeld, Jana Shen
Integrative Approach to Dissect the Drug Resistance Mechanism of the H172Y Mutation of SARS-CoV-2 Main Protease. Journal of chemical information and modeling (2023)
Jack A Henderson, Ruibin Liu, Robert C Harris, Yandong Huang, Vinicius Martins de Oliveira, Jana Shen
A Guide to the Continuous Constant pH Molecular Dynamics Methods in Amber and CHARMM [Article v1.0]. Living journal of computational molecular science 4 (1) (2022)
Jack A Henderson, Ruibin Liu, Robert C Harris, Yandong Huang, Vinicius Martins de Oliveira, Jana Shen
A Guide to the Continuous Constant pH Molecular Dynamics Methods in Amber and CHARMM [Article v1.0]. Living journal of computational molecular science 4 (1) (2022)
Vinicius Martins de Oliveira, Marieli M G Dias, Thayná M Avelino, Natália B Videira, Fernando B da Silva, Tábata R Doratioto, Paul C Whitford, Vitor B P Leite, Ana Carolina Migliorini Figueira
pH and the Breast Cancer Recurrent Mutation D538G Affect the Process of Activation of Estrogen Receptor α. Biochemistry 61 (6) (2022)
Fernando Bruno da Silva, Vinicius Martins de Oliveira, Murilo N Sanches, Vinícius de Godoi Contessoto, Ingrid B S Martins
Rational Design of Chymotrypsin Inhibitor 2 by Optimizing Non-Native Interactions. Journal of chemical information and modeling 60 (2) (2019)
Vinicius Martins de Oliveira, Daniel Lucas Zago Caetano, Fernando Bruno da Silva, Paulo R Mouro, Antonio B de Oliveira, Sidney J de Carvalho, Ingrid B S Martins
pH and Charged Mutations Modulate Cold Shock Protein Folding and Stability: A Constant pH Monte Carlo Study. Journal of chemical theory and computation 16 (1) (2019)
Vinícius de Godoi Contessoto, Vinicius Martins de Oliveira, Bruno R Fernandes, Gabriel G Slade, Vitor B P Leite
TKSA-MC: A web server for rational mutation through the optimization of protein charge interactions. Proteins 86 (11) (2018)
Fernando Bruno da Silva, Vinícius de Godoi Contessoto, Vinicius Martins de Oliveira, Jane Clarke, Ingrid B S Martins
Non-Native Cooperative Interactions Modulate Protein Folding Rates. The journal of physical chemistry. B 122 (48) (2018)