Vivek Swarup

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 38

Top Venues

Nature communications

Alzheimer's & dementia : the journal of the Alzheimer's Association

mBio

Neuro-oncology advances

University of California Irvine

University Laval (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California Irvine Jul 01 2018

United States

Assistant Professor :: Neurobiology and Behavior

UCLA Life Sciences Jul 01 2012

United States

Postdoctoral Scholar :: Neurology

Education History

University Laval Sep 04 2007 - Apr 04 2012

Canada

PHD :: Center of Research of CHUQ

Banaras Hindu University Jul 01 2002 - Jun 01 2005

India

BSC :: Zoology

Publications

Kunal S Patel, Kaleab K Tessema, Riki Kawaguchi, Lindsey Dudley, Alvaro G Alvarado, Sree Deepthi Muthukrishnan, Travis Perryman, Akifumi Hagiwara, Vivek Swarup, Linda M Liau, Anthony C Wang, William Yong, Daniel H Geschwind, Ichiro Nakano, Steven A Goldman, Richard G Everson, Benjamin M Ellingson, Harley I Kornblum
Single-nucleus expression characterization of non-enhancing region of recurrent high-grade glioma. Neuro-oncology advances 6 (1) (2024)
Negin Rahimzadeh, Shushrruth Sai Srinivasan, Jing Zhang, Vivek Swarup
Gene networks and systems biology in Alzheimer's disease: Insights from multi-omics approaches. Alzheimer's & dementia : the journal of the Alzheimer's Association 20 (5) (2024)
Timothy M O'Shea, Yan Ao, Shinong Wang, Yilong Ren, Amy L Cheng, Riki Kawaguchi, Zechuan Shi, Vivek Swarup, Michael V Sofroniew
Derivation and transcriptional reprogramming of border-forming wound repair astrocytes after spinal cord injury or stroke in mice. Nature neuroscience 27 (8) (2024)
Kunal S Patel, Kaleab K Tessema, Riki Kawaguchi, Lindsey Dudley, Alvaro G Alvarado, Sree Deepthi Muthukrishnan, Travis Perryman, Akifumi Hagiwara, Vivek Swarup, Linda M Liau, Anthony C Wang, William Yong, Daniel H Geschwind, Ichiro Nakano, Steven A Goldman, Richard G Everson, Benjamin M Ellingson, Harley I Kornblum
Single-nucleus expression characterization of non-enhancing region of recurrent high-grade glioma. Neuro-oncology advances 6 (1) (2024)
Kunal S Patel, Kaleab K Tessema, Riki Kawaguchi, Lindsey Dudley, Alvaro G Alvarado, Sree Deepthi Muthukrishnan, Travis Perryman, Akifumi Hagiwara, Vivek Swarup, Linda M Liau, Anthony C Wang, William Yong, Daniel H Geschwind, Ichiro Nakano, Steven A Goldman, Richard G Everson, Benjamin M Ellingson, Harley I Kornblum
Single-nucleus expression characterization of non-enhancing region of recurrent high-grade glioma. Neuro-oncology advances 6 (1) (2024)
Atreye Majumdar, Indira Priya Siva Venkatesh, Vivek Swarup, Anirban Basu
Short-chain fatty acids abrogate Japanese encephalitis virus-induced inflammation in microglial cells via miR-200a-3p/ZBTB20/IKβα axis. mBio 15 (7) (2024)
Kunal S Patel, Kaleab K Tessema, Riki Kawaguchi, Lindsey Dudley, Alvaro G Alvarado, Sree Deepthi Muthukrishnan, Travis Perryman, Akifumi Hagiwara, Vivek Swarup, Linda M Liau, Anthony C Wang, William Yong, Daniel H Geschwind, Ichiro Nakano, Steven A Goldman, Richard G Everson, Benjamin M Ellingson, Harley I Kornblum
Single-nucleus expression characterization of non-enhancing region of recurrent high-grade glioma. Neuro-oncology advances 6 (1) (2024)
Timothy M O'Shea, Yan Ao, Shinong Wang, Yilong Ren, Amy L Cheng, Riki Kawaguchi, Zechuan Shi, Vivek Swarup, Michael V Sofroniew
Derivation and transcriptional reprogramming of border-forming wound repair astrocytes after spinal cord injury or stroke in mice. Nature neuroscience 27 (8) (2024)
Negin Rahimzadeh, Shushrruth Sai Srinivasan, Jing Zhang, Vivek Swarup
Gene networks and systems biology in Alzheimer's disease: Insights from multi-omics approaches. Alzheimer's & dementia : the journal of the Alzheimer's Association 20 (5) (2024)
Atreye Majumdar, Indira Priya Siva Venkatesh, Vivek Swarup, Anirban Basu
Short-chain fatty acids abrogate Japanese encephalitis virus-induced inflammation in microglial cells via miR-200a-3p/ZBTB20/IKβα axis. mBio 15 (7) (2024)
Negin Rahimzadeh, Shushrruth Sai Srinivasan, Jing Zhang, Vivek Swarup
Gene networks and systems biology in Alzheimer's disease: Insights from multi-omics approaches. Alzheimer's & dementia : the journal of the Alzheimer's Association (2024)
Atreye Majumdar, Indira Priya Siva Venkatesh, Vivek Swarup, Anirban Basu
Short-chain fatty acids abrogate Japanese encephalitis virus-induced inflammation in microglial cells via miR-200a-3p/ZBTB20/IKβα axis. mBio (2024)
Timothy M O'Shea, Yan Ao, Shinong Wang, Yilong Ren, Amy L Cheng, Riki Kawaguchi, Zechuan Shi, Vivek Swarup, Michael V Sofroniew
Derivation and transcriptional reprogramming of border-forming wound repair astrocytes after spinal cord injury or stroke in mice. Nature neuroscience (2024)
Zechuan Shi, Sudeshna Das, Samuel Morabito, Emily Miyoshi, Jennifer Stocksdale, Nora Emerson, Shushrruth Sai Srinivasan, Arshi Shahin, Negin Rahimzadeh, Zhenkun Cao, Justine Silva, Andres Alonso Castaneda, Elizabeth Head, Leslie Thompson, Vivek Swarup
Single-nucleus multi-omics identifies shared and distinct pathways in Pick's and Alzheimer's disease. bioRxiv : the preprint server for biology (2024)
Atreye Majumdar, Indira Priya Siva Venkatesh, Vivek Swarup, Anirban Basu
Short-chain fatty acids abrogate Japanese encephalitis virus-induced inflammation in microglial cells via miR-200a-3p/ZBTB20/IKβα axis. mBio 15 (7) (2024)
Negin Rahimzadeh, Shushrruth Sai Srinivasan, Jing Zhang, Vivek Swarup
Gene networks and systems biology in Alzheimer's disease: Insights from multi-omics approaches. Alzheimer's & dementia : the journal of the Alzheimer's Association 20 (5) (2024)
Atreye Majumdar, Indira Priya Siva Venkatesh, Vivek Swarup, Anirban Basu
Short-chain fatty acids abrogate Japanese encephalitis virus-induced inflammation in microglial cells via miR-200a-3p/ZBTB20/IKβα axis. mBio 15 (7) (2024)
Negin Rahimzadeh, Shushrruth Sai Srinivasan, Jing Zhang, Vivek Swarup
Gene networks and systems biology in Alzheimer's disease: Insights from multi-omics approaches. Alzheimer's & dementia : the journal of the Alzheimer's Association (2024)
Kunal S Patel, Kaleab K Tessema, Riki Kawaguchi, Lindsey Dudley, Alvaro G Alvarado, Sree Deepthi Muthukrishnan, Travis Perryman, Akifumi Hagiwara, Vivek Swarup, Linda M Liau, Anthony C Wang, William Yong, Daniel H Geschwind, Ichiro Nakano, Steven A Goldman, Richard G Everson, Benjamin M Ellingson, Harley I Kornblum
Single-nucleus expression characterization of non-enhancing region of recurrent high-grade glioma. Neuro-oncology advances 6 (1) (2024)
Negin Rahimzadeh, Shushrruth Sai Srinivasan, Jing Zhang, Vivek Swarup
Gene networks and systems biology in Alzheimer's disease: Insights from multi-omics approaches. Alzheimer's & dementia : the journal of the Alzheimer's Association 20 (5) (2024)
Timothy M O'Shea, Yan Ao, Shinong Wang, Yilong Ren, Amy L Cheng, Riki Kawaguchi, Zechuan Shi, Vivek Swarup, Michael V Sofroniew
Derivation and transcriptional reprogramming of border-forming wound repair astrocytes after spinal cord injury or stroke in mice. Nature neuroscience 27 (8) (2024)
Timothy M O'Shea, Yan Ao, Shinong Wang, Yilong Ren, Amy L Cheng, Riki Kawaguchi, Zechuan Shi, Vivek Swarup, Michael V Sofroniew
Derivation and transcriptional reprogramming of border-forming wound repair astrocytes after spinal cord injury or stroke in mice. Nature neuroscience 27 (8) (2024)
Emily Miyoshi, Samuel Morabito, Caden M Henningfield, Negin Rahimzadeh, Sepideh Kiani Shabestari, Sudeshna Das, Neethu Michael, Fairlie Reese, Zechuan Shi, Zhenkun Cao, Vanessa Scarfone, Miguel A Arreola, Jackie Lu, Sierra Wright, Justine Silva, Kelsey Leavy, Ira T Lott, Eric Doran, William H Yong, Saba Shahin, Mari Perez-Rosendahl, Elizabeth Head, Kim N Green, Vivek Swarup
Spatial and single-nucleus transcriptomic analysis of genetic and sporadic forms of Alzheimer's Disease. bioRxiv : the preprint server for biology (2023)
Menghon Cheah, Yuyan Cheng, Veselina Petrova, Anda Cimpean, Pavla Jendelova, Vivek Swarup, Clifford J Woolf, Daniel H Geschwind, James W Fawcett
Integrin-driven Axon Regeneration in the Spinal Cord Activates a Distinctive CNS Regeneration Program. The Journal of neuroscience : the official journal of the Society for Neuroscience (2023)
Ryan G Lim, Osama Al-Dalahmah, Jie Wu, Maxwell P Gold, Jack C Reidling, Guomei Tang, Miriam Adam, David K Dansu, Hye-Jin Park, Patrizia Casaccia, Ricardo Miramontes, Andrea M Reyes-Ortiz, Alice Lau, Richard A Hickman, Fatima Khan, Fahad Paryani, Alice Tang, Kenneth Ofori, Emily Miyoshi, Neethu Michael, Nicolette McClure, Xena E Flowers, Jean Paul Vonsattel, Shawn Davidson, Vilas Menon, Vivek Swarup, Ernest Fraenkel, James E Goldman, Leslie M Thompson
Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation. Nature communications 13 (1) (2022)
Ryan G Lim, Osama Al-Dalahmah, Jie Wu, Maxwell P Gold, Jack C Reidling, Guomei Tang, Miriam Adam, David K Dansu, Hye-Jin Park, Patrizia Casaccia, Ricardo Miramontes, Andrea M Reyes-Ortiz, Alice Lau, Richard A Hickman, Fatima Khan, Fahad Paryani, Alice Tang, Kenneth Ofori, Emily Miyoshi, Neethu Michael, Nicolette McClure, Xena E Flowers, Jean Paul Vonsattel, Shawn Davidson, Vilas Menon, Vivek Swarup, Ernest Fraenkel, James E Goldman, Leslie M Thompson
Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation. Nature communications 13 (1) (2022)
Ryan G Lim, Osama Al-Dalahmah, Jie Wu, Maxwell P Gold, Jack C Reidling, Guomei Tang, Miriam Adam, David K Dansu, Hye-Jin Park, Patrizia Casaccia, Ricardo Miramontes, Andrea M Reyes-Ortiz, Alice Lau, Richard A Hickman, Fatima Khan, Fahad Paryani, Alice Tang, Kenneth Ofori, Emily Miyoshi, Neethu Michael, Nicolette McClure, Xena E Flowers, Jean Paul Vonsattel, Shawn Davidson, Vilas Menon, Vivek Swarup, Ernest Fraenkel, James E Goldman, Leslie M Thompson
Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation. Nature communications 13 (1) (2022)
Ryan G Lim, Osama Al-Dalahmah, Jie Wu, Maxwell P Gold, Jack C Reidling, Guomei Tang, Miriam Adam, David K Dansu, Hye-Jin Park, Patrizia Casaccia, Ricardo Miramontes, Andrea M Reyes-Ortiz, Alice Lau, Richard A Hickman, Fatima Khan, Fahad Paryani, Alice Tang, Kenneth Ofori, Emily Miyoshi, Neethu Michael, Nicolette McClure, Xena E Flowers, Jean Paul Vonsattel, Shawn Davidson, Vilas Menon, Vivek Swarup, Ernest Fraenkel, James E Goldman, Leslie M Thompson
Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation. Nature communications 13 (1) (2022)
Ryan G Lim, Osama Al-Dalahmah, Jie Wu, Maxwell P Gold, Jack C Reidling, Guomei Tang, Miriam Adam, David K Dansu, Hye-Jin Park, Patrizia Casaccia, Ricardo Miramontes, Andrea M Reyes-Ortiz, Alice Lau, Richard A Hickman, Fatima Khan, Fahad Paryani, Alice Tang, Kenneth Ofori, Emily Miyoshi, Neethu Michael, Nicolette McClure, Xena E Flowers, Jean Paul Vonsattel, Shawn Davidson, Vilas Menon, Vivek Swarup, Ernest Fraenkel, James E Goldman, Leslie M Thompson
Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation. Nature communications 13 (1) (2022)
Ryan G Lim, Osama Al-Dalahmah, Jie Wu, Maxwell P Gold, Jack C Reidling, Guomei Tang, Miriam Adam, David K Dansu, Hye-Jin Park, Patrizia Casaccia, Ricardo Miramontes, Andrea M Reyes-Ortiz, Alice Lau, Richard A Hickman, Fatima Khan, Fahad Paryani, Alice Tang, Kenneth Ofori, Emily Miyoshi, Neethu Michael, Nicolette McClure, Xena E Flowers, Jean Paul Vonsattel, Shawn Davidson, Vilas Menon, Vivek Swarup, Ernest Fraenkel, James E Goldman, Leslie M Thompson
Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation. Nature communications 13 (1) (2022)
Miguel A Arreola, Neelakshi Soni, Joshua D Crapser, Lindsay A Hohsfield, Monica R P Elmore, Dina P Matheos, Marcelo A Wood, Vivek Swarup, Ali Mortazavi, Kim N Green
Microglial dyshomeostasis drives perineuronal net and synaptic loss in a CSF1R+/- mouse model of ALSP, which can be rescued via CSF1R inhibitors. Science advances 7 (35) (2021)
Rianne R Campbell, Siwei Chen, Joy H Beardwood, Alberto J López, Lilyana V Pham, Ashley M Keiser, Jessica E Childs, Dina P Matheos, Vivek Swarup, Pierre Baldi, Marcelo A Wood
Cocaine induces paradigm-specific changes to the transcriptome within the ventral tegmental area. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 46 (10) (2021)
David Baglietto-Vargas, Stefania Forner, Lena Cai, Alessandra Cadete Martini, Laura Trujillo-Estrada, Vivek Swarup, Marie Minh Thu Nguyen, Kelly Do Huynh, Dominic I Javonillo, Kristine Minh Tran, Jimmy Phan, Shan Jiang, Enikö A Kramár, Cristina Nuñez-Diaz, Gabriela Balderrama-Gutierrez, Franklin G Garcia, Jessica Childs, Carlos J Rodriguez-Ortiz, Juan Antonio Garcia-Leon, Masashi Kitazawa, Mohammad Shahnawaz, Dina P Matheos, Xinyi Ma, Celia Da Cunha, Ken C Walls, Rahasson R Ager, Claudio Soto, Antonia Gutierrez, Ines Moreno-Gonzalez, Ali Mortazavi, Andrea J Tenner, Grant R MacGregor, Marcelo Wood, Kim N Green, Frank M LaFerla
Generation of a humanized Aβ expressing mouse demonstrating aspects of Alzheimer's disease-like pathology. Nature communications 12 (1) (2021)
Samuel J Morabito, Emily Miyoshi, Neethu Michael, Saba Shahin, Alessandra Cadete Martini, Elizabeth Head, Justine Silva, Kelsey Leavy, Mari Perez-Rosendahl, Vivek Swarup
Single-nucleus chromatin accessibility and transcriptomic characterization of Alzheimer's disease. Nature genetics 53 (8) (2021)
Christina M Ruiz, Alexa Torrens, Erik Castillo, Christina R Perrone, Jenny Cevallos, Victoria C Inshishian, Eden V Harder, Drew N Justeson, Marilyn A Huestis, Vivek Swarup, Daniele Piomelli, Stephen V Mahler
Pharmacokinetic, behavioral, and brain activity effects of Δ9-tetrahydrocannabinol in adolescent male and female rats. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 46 (5) (2020)
Yi Li, Xuelian He, Riki Kawaguchi, Yu Zhang, Qing Wang, Aboozar Monavarfeshani, Zhiyun Yang, Bo Chen, Zhongju Shi, Huyan Meng, Songlin Zhou, Junjie Zhu, Anne Jacobi, Vivek Swarup, Phillip G Popovich, Daniel H Geschwind, Zhigang He
Microglia-organized scar-free spinal cord repair in neonatal mice. Nature 587 (7835) (2020)
Rachael E Hokenson, Annabel K Short, Yuncai Chen, Aidan L Pham, Emily T Adams, Jessica L Bolton, Vivek Swarup, Christine M Gall, Tallie Z Baram
Unexpected Role of Physiological Estrogen in Acute Stress-Induced Memory Deficits. The Journal of neuroscience : the official journal of the Society for Neuroscience 41 (4) (2020)
Vivek Swarup, Flora I Hinz, Jessica E Rexach, Ken-Ichi Noguchi, Hiroyoshi Toyoshiba, Akira Oda, Keisuke Hirai, Arjun Sarkar, Nicholas T Seyfried, Chialin Cheng, Stephen J Haggarty, null null, Murray Grossman, Vivanna M Van Deerlin, John Q Trojanowski, James J Lah, Allan I Levey, Shinichi Kondou, Daniel H Geschwind
Identification of evolutionarily conserved gene networks mediating neurodegenerative dementia. Nature medicine 25 (1) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Vivek Swarup