Yasufumi Matsumura

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 60

Top Venues

Antimicrobial agents and chemotherapy

Journal of clinical microbiology

Microbiology spectrum

The Journal of antimicrobial chemotherapy

Kyoto University Graduate School of Medicine

Kyoto University Graduate School of Medicine (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Kyoto University Graduate School of Medicine Sep 01 2019

Japan

Associate Professor :: Clinical Laboratory Medicine

Kyoto University Graduate School of Medicine Apr 01 2012 - Aug 31 2019

Japan

Assistant Professor :: Clinical Laboratory Meidicine

Education History

Kyoto University Graduate School of Medicine Apr 01 2008 - Mar 26 2012

Japan

PHD

Publications

Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology (2024)
Ryota Hase, Aki Sakurai, Masahiro Suzuki, Naoya Itoh, Kayoko Hayakawa, Kohei Uemura, Yasufumi Matsumura, Hideaki Kato, Takuma Ishihara, David Van Duin, Norio Ohmagari, Yohei Doi, Sho Saito
Clinical characteristics and genome epidemiology of Stenotrophomonas maltophilia in Japan. The Journal of antimicrobial chemotherapy 79 (8) (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy 68 (2) (2024)
Ryota Hase, Aki Sakurai, Masahiro Suzuki, Naoya Itoh, Kayoko Hayakawa, Kohei Uemura, Yasufumi Matsumura, Hideaki Kato, Takuma Ishihara, David Van Duin, Norio Ohmagari, Yohei Doi, Sho Saito
Clinical characteristics and genome epidemiology of Stenotrophomonas maltophilia in Japan. The Journal of antimicrobial chemotherapy (2024)
Yasufumi Matsumura, Taro Noguchi, Koh Shinohara, Masaki Yamamoto, Miki Nagao
Development and evaluation of three automated media pooling and molecular diagnostic systems for the detection of SARS-CoV-2. Microbiology spectrum (2024)
Ryota Hase, Aki Sakurai, Masahiro Suzuki, Naoya Itoh, Kayoko Hayakawa, Kohei Uemura, Yasufumi Matsumura, Hideaki Kato, Takuma Ishihara, David Van Duin, Norio Ohmagari, Yohei Doi, Sho Saito
Clinical characteristics and genome epidemiology of Stenotrophomonas maltophilia in Japan. The Journal of antimicrobial chemotherapy (2024)
Kazuya Fujimoto, Yoshikazu Kameda, Yuta Nagano, Sayaka Deguchi, Takuya Yamamoto, Rafal P Krol, Peter Gee, Yasufumi Matsumura, Toru Okamoto, Miki Nagao, Kazuo Takayama, Ryuji Yokokawa
SARS-CoV-2-induced disruption of a vascular bed in a microphysiological system caused by type-I interferon from bronchial organoids. Lab on a chip (2024)
Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology 62 (3) (2024)
Yasufumi Matsumura, Taro Noguchi, Koh Shinohara, Masaki Yamamoto, Miki Nagao
Development and evaluation of three automated media pooling and molecular diagnostic systems for the detection of SARS-CoV-2. Microbiology spectrum 12 (3) (2024)
Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology 62 (3) (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy 68 (2) (2024)
Yasufumi Matsumura, Taro Noguchi, Koh Shinohara, Masaki Yamamoto, Miki Nagao
Development and evaluation of three automated media pooling and molecular diagnostic systems for the detection of SARS-CoV-2. Microbiology spectrum 12 (3) (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy 68 (2) (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy 68 (2) (2024)
Kazuya Fujimoto, Yoshikazu Kameda, Yuta Nagano, Sayaka Deguchi, Takuya Yamamoto, Rafal P Krol, Peter Gee, Yasufumi Matsumura, Toru Okamoto, Miki Nagao, Kazuo Takayama, Ryuji Yokokawa
SARS-CoV-2-induced disruption of a vascular bed in a microphysiological system caused by type-I interferon from bronchial organoids. Lab on a chip 24 (16) (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy 68 (2) (2024)
Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology 62 (3) (2024)
Yasufumi Matsumura, Taro Noguchi, Koh Shinohara, Masaki Yamamoto, Miki Nagao
Development and evaluation of three automated media pooling and molecular diagnostic systems for the detection of SARS-CoV-2. Microbiology spectrum 12 (3) (2024)
Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology 62 (3) (2024)
Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology 62 (3) (2024)
Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology 62 (3) (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy 68 (2) (2024)
Kazuya Fujimoto, Yoshikazu Kameda, Yuta Nagano, Sayaka Deguchi, Takuya Yamamoto, Rafal P Krol, Peter Gee, Yasufumi Matsumura, Toru Okamoto, Miki Nagao, Kazuo Takayama, Ryuji Yokokawa
SARS-CoV-2-induced disruption of a vascular bed in a microphysiological system caused by type-I interferon from bronchial organoids. Lab on a chip 24 (16) (2024)
Ryota Hase, Aki Sakurai, Masahiro Suzuki, Naoya Itoh, Kayoko Hayakawa, Kohei Uemura, Yasufumi Matsumura, Hideaki Kato, Takuma Ishihara, David Van Duin, Norio Ohmagari, Yohei Doi, Sho Saito
Clinical characteristics and genome epidemiology of Stenotrophomonas maltophilia in Japan. The Journal of antimicrobial chemotherapy 79 (8) (2024)
Kazuya Fujimoto, Yoshikazu Kameda, Yuta Nagano, Sayaka Deguchi, Takuya Yamamoto, Rafal P Krol, Peter Gee, Yasufumi Matsumura, Toru Okamoto, Miki Nagao, Kazuo Takayama, Ryuji Yokokawa
SARS-CoV-2-induced disruption of a vascular bed in a microphysiological system caused by type-I interferon from bronchial organoids. Lab on a chip 24 (16) (2024)
Johann D D Pitout, Gisele Peirano, Yasufumi Matsumura, Rebekah DeVinney, Liang Chen
Escherichia coli sequence type 410 with carbapenemases: a paradigm shift within E. coli toward multidrug resistance. Antimicrobial agents and chemotherapy 68 (2) (2024)
Gisele Peirano, L Ricardo Castellanos, Yasufumi Matsumura, Ryan Chaffee, Daniel Castañeda-Mogollón, Dylan R Pillai, Johann D D Pitout
Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131. Journal of clinical microbiology 62 (3) (2024)
Koh Shinohara, Takao Fujisawa, Bin Chang, Yutaka Ito, Shigeru Suga, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Makoto Ohnishi, Motoyuki Sugai, Satoshi Nakano
Frequent Transmission of Streptococcus pneumoniae Serotype 35B and 35D, Clonal Complex 558 Lineage, across Continents and the Formation of Multiple Clades in Japan. Antimicrobial agents and chemotherapy 67 (2) (2023)
Yasufumi Matsumura, Tomofumi Nakazaki, Kanako Kitamori, Eiki Kure, Koh Shinohara, Yasuhiro Tsuchido, Satomi Yukawa, Taro Noguchi, Masaki Yamamoto, Miki Nagao
Development and evaluation of the automated multipurpose molecular testing system PCRpack for high-throughput SARS-CoV-2 testing. Microbiology spectrum (2023)
Diego Borin Nobrega, Gisele Peirano, Yasufumi Matsumura, Johann D D Pitout
Molecular Epidemiology of Global Carbapenemase-Producing Citrobacter spp. (2015-2017). Microbiology spectrum (2023)
Koh Shinohara, Takao Fujisawa, Bin Chang, Yutaka Ito, Shigeru Suga, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Makoto Ohnishi, Motoyuki Sugai, Satoshi Nakano
Frequent Transmission of Streptococcus pneumoniae Serotype 35B and 35D, Clonal Complex 558 Lineage, across Continents and the Formation of Multiple Clades in Japan. Antimicrobial agents and chemotherapy 67 (2) (2023)
Koh Shinohara, Takao Fujisawa, Bin Chang, Yutaka Ito, Shigeru Suga, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Makoto Ohnishi, Motoyuki Sugai, Satoshi Nakano
Frequent Transmission of Streptococcus pneumoniae Serotype 35B and 35D, Clonal Complex 558 Lineage, across Continents and the Formation of Multiple Clades in Japan. Antimicrobial agents and chemotherapy 67 (2) (2023)
Miki Nagao, Yasufumi Matsumura, Masaki Yamamoto, Koh Shinohara, Taro Noguchi, Satomi Yukawa, Yasuhiro Tsuchido, Haruma Teraishi, Hiromi Inoue, Takeshi Ikeda
Incidence of and risk factors for suspected COVID-19 reinfection in Kyoto City: a population-based epidemiological study. European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology (2023)
Kayoko Hayakawa, Yasufumi Matsumura, Kohei Uemura, Shinya Tsuzuki, Aki Sakurai, Ryutaro Tanizaki, Koh Shinohara, Takehiro Hashimoto, Ryota Hase, Takashi Matono, Hideaki Kato, Momoko Mawatari, Hiroshi Hara, Yukihiro Hamada, Sho Saito, Norio Ohmagari, Yohei Doi
Effectiveness of cefmetazole versus meropenem for invasive urinary tract infections caused by extended-spectrum β-lactamase-producing Escherichia coli . Antimicrobial agents and chemotherapy (2023)
Koh Shinohara, Takao Fujisawa, Bin Chang, Yutaka Ito, Shigeru Suga, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Makoto Ohnishi, Motoyuki Sugai, Satoshi Nakano
Frequent Transmission of Streptococcus pneumoniae Serotype 35B and 35D, Clonal Complex 558 Lineage, across Continents and the Formation of Multiple Clades in Japan. Antimicrobial agents and chemotherapy 67 (2) (2023)
Koh Shinohara, Takao Fujisawa, Bin Chang, Yutaka Ito, Shigeru Suga, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Makoto Ohnishi, Motoyuki Sugai, Satoshi Nakano
Frequent Transmission of Streptococcus pneumoniae Serotype 35B and 35D, Clonal Complex 558 Lineage, across Continents and the Formation of Multiple Clades in Japan. Antimicrobial agents and chemotherapy (2023)
Koh Shinohara, Takao Fujisawa, Bin Chang, Yutaka Ito, Shigeru Suga, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Makoto Ohnishi, Motoyuki Sugai, Satoshi Nakano
Frequent Transmission of Streptococcus pneumoniae Serotype 35B and 35D, Clonal Complex 558 Lineage, across Continents and the Formation of Multiple Clades in Japan. Antimicrobial agents and chemotherapy 67 (2) (2023)
Koh Shinohara, Takao Fujisawa, Bin Chang, Yutaka Ito, Shigeru Suga, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Makoto Ohnishi, Motoyuki Sugai, Satoshi Nakano
Frequent Transmission of Streptococcus pneumoniae Serotype 35B and 35D, Clonal Complex 558 Lineage, across Continents and the Formation of Multiple Clades in Japan. Antimicrobial agents and chemotherapy 67 (2) (2023)
Johann D D Pitout, Gisele Peirano, Liang Chen, Rebekah DeVinney, Yasufumi Matsumura
Escherichia coli ST1193: Following in the Footsteps of E. coli ST131. Antimicrobial agents and chemotherapy 66 (7) (2022)
Emi Sano, Tatsuya Suzuki, Rina Hashimoto, Yumi Itoh, Ayaka Sakamoto, Yusuke Sakai, Akatsuki Saito, Daisuke Okuzaki, Daisuke Motooka, Yukiko Muramoto, Takeshi Noda, Tomohiko Takasaki, Jun-Ichi Sakuragi, Shohei Minami, Takeshi Kobayashi, Takuya Yamamoto, Yasufumi Matsumura, Miki Nagao, Toru Okamoto, Kazuo Takayama
Cell response analysis in SARS-CoV-2 infected bronchial organoids. Communications biology 5 (1) (2022)
Ryota Gomi, Yasufumi Matsumura, Michio Tanaka, Masaru Ihara, Yoshinori Sugie, Tomonari Matsuda, Masaki Yamamoto
Emergence of rare carbapenemases (FRI, GES-5, IMI, SFC and SFH-1) in Enterobacterales isolated from surface waters in Japan. The Journal of antimicrobial chemotherapy 77 (5) (2022)
Yukihiro Hamada, Hidefumi Kasai, Moeko Suzuki-Ito, Yasufumi Matsumura, Yohei Doi, Kayoko Hayakawa
Pharmacokinetic/Pharmacodynamic Analysis and Dose Optimization of Cefmetazole and Flomoxef against Extended-Spectrum β-Lactamase-Producing Enterobacterales in Patients with Invasive Urinary Tract Infection Considering Renal Function. Antibiotics (Basel, Switzerland) 11 (4) (2022)
Satoshi Nakano, Takao Fujisawa, Bin Chang, Yutaka Ito, Hideki Akeda, Jiro Fujita, Yasufumi Matsumura, Masaki Yamamoto, Shigeru Suga, Kazunori Oishi, Miki Nagao, Makoto Ohnishi
Whole-Genome Analysis-Based Phylogeographic Investigation of Streptococcus pneumoniae Serotype 19A Sequence Type 320 Isolates in Japan. Antimicrobial agents and chemotherapy 66 (2) (2021)
Taro Noguchi, Yasufumi Matsumura, Toru Kanahashi, Michio Tanaka, Yasuhiro Tsuchido, Takuro Matsumura, Satoshi Nakano, Masaki Yamamoto, Miki Nagao, Satoshi Ichiyama
Role of TEM-1 β-Lactamase in the Predominance of Ampicillin-Sulbactam-Nonsusceptible Escherichia coli in Japan. Antimicrobial agents and chemotherapy 63 (2) (2019)
Satoshi Nakano, Takao Fujisawa, Yutaka Ito, Bin Chang, Yasufumi Matsumura, Masaki Yamamoto, Shigeru Suga, Makoto Ohnishi, Miki Nagao
Penicillin-Binding Protein Typing, Antibiotic Resistance Gene Identification, and Molecular Phylogenetic Analysis of Meropenem-Resistant Streptococcus pneumoniae Serotype 19A-CC3111 Strains in Japan. Antimicrobial agents and chemotherapy 63 (9) (2019)
Satoshi Nakano, Takao Fujisawa, Yutaka Ito, Bin Chang, Yasufumi Matsumura, Masaki Yamamoto, Shigeru Suga, Makoto Ohnishi, Miki Nagao
Whole-Genome Sequencing Analysis of Multidrug-Resistant Serotype 15A Streptococcus pneumoniae in Japan and the Emergence of a Highly Resistant Serotype 15A-ST9084 Clone. Antimicrobial agents and chemotherapy 63 (5) (2019)
Johann D D Pitout, Gisele Peirano, Marleen M Kock, Kathy-Anne Strydom, Yasufumi Matsumura
The Global Ascendency of OXA-48-Type Carbapenemases. Clinical microbiology reviews 33 (1) (2019)
Gisele Peirano, Yasufumi Matsumura, Diego Borin Nobrega, Johann D D Pitout
A Cost-Effective Method for Identifying Enterobacterales with OXA-181. Journal of clinical microbiology 57 (11) (2019)
Yasufumi Matsumura, Gisele Peirano, Johann D D Pitout
Complete Genome Sequence of Escherichia coli J53, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments. Genome announcements 6 (21) (2018)
Ryota Gomi, Tomonari Matsuda, Masaki Yamamoto, Pei-Hsin Chou, Michio Tanaka, Satoshi Ichiyama, Minoru Yoneda, Yasufumi Matsumura
Characteristics of Carbapenemase-Producing Enterobacteriaceae in Wastewater Revealed by Genomic Analysis. Antimicrobial agents and chemotherapy 62 (5) (2018)
Yasufumi Matsumura, Masaki Yamamoto, Satoshi Nakano, Miki Nagao
Complete Genome Sequence of Escherichia coli ME8067, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments. Genome announcements 6 (25) (2018)
Masaki Yamamoto, Yasufumi Matsumura, Ryota Gomi, Tomonari Matsuda, Satoshi Nakano, Miki Nagao, Michio Tanaka, Satoshi Ichiyama
Molecular Analysis of a blaIMP-1-Harboring Class 3 Integron in Multidrug-Resistant Pseudomonas fulva. Antimicrobial agents and chemotherapy 62 (8) (2018)
Yasufumi Matsumura, Gisele Peirano, Mary R Motyl, Mark D Adams, Liang Chen, Barry Kreiswirth, Rebekah DeVinney, Johann D D Pitout
Global Molecular Epidemiology of IMP-Producing Enterobacteriaceae. Antimicrobial agents and chemotherapy 61 (4) (2017)
Yasufumi Matsumura, Johann D D Pitout, Gisele Peirano, Rebekah DeVinney, Taro Noguchi, Masaki Yamamoto, Ryota Gomi, Tomonari Matsuda, Satoshi Nakano, Miki Nagao, Michio Tanaka, Satoshi Ichiyama
Rapid Identification of Different Escherichia coli Sequence Type 131 Clades. Antimicrobial agents and chemotherapy 61 (8) (2017)
Ryota Gomi, Tomonari Matsuda, Yasufumi Matsumura, Masaki Yamamoto, Michio Tanaka, Satoshi Ichiyama, Minoru Yoneda
Whole-Genome Analysis of Antimicrobial-Resistant and Extraintestinal Pathogenic Escherichia coli in River Water. Applied and environmental microbiology 83 (5) (2017)
Ryota Gomi, Tomonari Matsuda, Yasufumi Matsumura, Masaki Yamamoto, Michio Tanaka, Satoshi Ichiyama, Minoru Yoneda
Occurrence of Clinically Important Lineages, Including the Sequence Type 131 C1-M27 Subclone, among Extended-Spectrum-β-Lactamase-Producing Escherichia coli in Wastewater. Antimicrobial agents and chemotherapy 61 (9) (2017)
Taro Noguchi, Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Shunji Takakura, Satoshi Ichiyama
Clinical and microbiologic characteristics of cefotaxime-non-susceptible Enterobacteriaceae bacteremia: a case control study. BMC infectious diseases 17 (1) (2017)
Masaki Yamamoto, Yasufumi Matsumura, Ryota Gomi, Tomonari Matsuda, Michio Tanaka, Miki Nagao, Shunji Takakura, Shinji Uemoto, Satoshi Ichiyama
Interspecies Dissemination of a Mobilizable Plasmid Harboring blaIMP-19 and the Possibility of Horizontal Gene Transfer in a Single Patient. Antimicrobial agents and chemotherapy 60 (9) (2016)
Yasufumi Matsumura, Masaki Yamamoto, Miki Nagao, Toshiaki Komori, Naohisa Fujita, Akihiko Hayashi, Tsunehiro Shimizu, Harumi Watanabe, Shoichi Doi, Michio Tanaka, Shunji Takakura, Satoshi Ichiyama
Multicenter retrospective study of cefmetazole and flomoxef for treatment of extended-spectrum-β-lactamase-producing Escherichia coli bacteremia. Antimicrobial agents and chemotherapy 59 (9) (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

Yasufumi Matsumura