Yasuyuki Ohkawa

ResearcherID Scopus Author ID Researcher Name Resolver ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 83

Top Venues

Nature communications

Nature

Communications biology

Science advances

Kyushu University

Osaka University, Graduate School of Medicine (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Kyushu University

Japan

Professor :: Medical Institute of Bioregulation

Kyushu University

Japan

Associate Professor (tenue) :: Graduate School of Medicine

Kyushu University

Japan

Assistant Professor(tenue-track) :: Graduate school of Medicine

University of Massachusetts Medical School

United States

Post-Doctoral fellow :: Cell Biology

Education History

Osaka University, Graduate School of Medicine

Japan

PHD

Okayama Univesity, Graduate school of Engineering

Japan

MSC

Okayama Univesity

Japan

BSC :: Department of Engineering

Publications

Masahiro Nishimura, Takeru Fujii, Hiroki Tanaka, Kazumitsu Maehara, Ken Morishima, Masahiro Shimizu, Yuki Kobayashi, Kayo Nozawa, Yoshimasa Takizawa, Masaaki Sugiyama, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Genome-wide mapping and cryo-EM structural analyses of the overlapping tri-nucleosome composed of hexasome-hexasome-octasome moieties. Communications biology 7 (1) (2024)
Masahiro Nishimura, Takeru Fujii, Hiroki Tanaka, Kazumitsu Maehara, Ken Morishima, Masahiro Shimizu, Yuki Kobayashi, Kayo Nozawa, Yoshimasa Takizawa, Masaaki Sugiyama, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Genome-wide mapping and cryo-EM structural analyses of the overlapping tri-nucleosome composed of hexasome-hexasome-octasome moieties. Communications biology 7 (1) (2024)
Shizuka Miura, Kenichi Horisawa, Tokuko Iwamori, Satoshi Tsujino, Kazuya Inoue, Satsuki Karasawa, Junpei Yamamoto, Yasuyuki Ohkawa, Sayaka Sekiya, Atsushi Suzuki
Hepatocytes differentiate into intestinal epithelial cells through a hybrid epithelial/mesenchymal cell state in culture. Nature communications 15 (1) (2024)
Takeshi Wakasa, Kentaro Nonaka, Akihito Harada, Yasuyuki Ohkawa, Chie Kikutake, Mikita Suyama, Takashi Kobunai, Kenta Tsunekuni, Kazuaki Matsuoka, Yuki Kataoka, Hiroaki Ochiiwa, Kazutaka Miyadera, Takeshi Sagara, Eiji Oki, Shigehiro Ohdo, Yoshihiko Maehara, Makoto Iimori, Hiroyuki Kitao
The anti-tumor effect of trifluridine via induction of aberrant mitosis is unaffected by mutations modulating p53 activity. Cell death discovery 10 (1) (2024)
Kosuke Tomimatsu, Takeru Fujii, Ryoma Bise, Kazufumi Hosoda, Yosuke Taniguchi, Hiroshi Ochiai, Hiroaki Ohishi, Kanta Ando, Ryoma Minami, Kaori Tanaka, Taro Tachibana, Seiichi Mori, Akihito Harada, Kazumitsu Maehara, Masao Nagasaki, Seiichi Uchida, Hitoshi Kurumizaka, Masashi Narita, Yasuyuki Ohkawa
Precise immunofluorescence canceling for highly multiplexed imaging to capture specific cell states. Nature communications 15 (1) (2024)
Takeshi Wakasa, Kentaro Nonaka, Akihito Harada, Yasuyuki Ohkawa, Chie Kikutake, Mikita Suyama, Takashi Kobunai, Kenta Tsunekuni, Kazuaki Matsuoka, Yuki Kataoka, Hiroaki Ochiiwa, Kazutaka Miyadera, Takeshi Sagara, Eiji Oki, Shigehiro Ohdo, Yoshihiko Maehara, Makoto Iimori, Hiroyuki Kitao
The anti-tumor effect of trifluridine via induction of aberrant mitosis is unaffected by mutations modulating p53 activity. Cell death discovery 10 (1) (2024)
Kosuke Tomimatsu, Takeru Fujii, Ryoma Bise, Kazufumi Hosoda, Yosuke Taniguchi, Hiroshi Ochiai, Hiroaki Ohishi, Kanta Ando, Ryoma Minami, Kaori Tanaka, Taro Tachibana, Seiichi Mori, Akihito Harada, Kazumitsu Maehara, Masao Nagasaki, Seiichi Uchida, Hitoshi Kurumizaka, Masashi Narita, Yasuyuki Ohkawa
Precise immunofluorescence canceling for highly multiplexed imaging to capture specific cell states. Nature communications 15 (1) (2024)
Ryota Higuchi, Kaori Tanaka, Yuichi Saito, Daisuke Murakami, Takashi Nakagawa, Stephen L Nutt, Yasuyuki Ohkawa, Yoshihiro Baba
Type I interferon promotes the fate of Toll-like receptor 9-stimulated follicular B cells to plasma cell differentiation. PNAS nexus 3 (4) (2024)
Kota Abe, Hikaru Ino, Tomomi Niwa, Daniel Semmy, Ayami Takaochi, Takashi Nishimura, Chihiro Mogi, Maki Uenaka, Masaru Ishii, Kaori Tanaka, Yasuyuki Ohkawa, Tohru Ishitani
Sex-dependent regulation of vertebrate somatic growth and aging by germ cells. Science advances 10 (24) (2024)
Shizuka Miura, Kenichi Horisawa, Tokuko Iwamori, Satoshi Tsujino, Kazuya Inoue, Satsuki Karasawa, Junpei Yamamoto, Yasuyuki Ohkawa, Sayaka Sekiya, Atsushi Suzuki
Hepatocytes differentiate into intestinal epithelial cells through a hybrid epithelial/mesenchymal cell state in culture. Nature communications 15 (1) (2024)
Masahiro Nishimura, Takeru Fujii, Hiroki Tanaka, Kazumitsu Maehara, Ken Morishima, Masahiro Shimizu, Yuki Kobayashi, Kayo Nozawa, Yoshimasa Takizawa, Masaaki Sugiyama, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Genome-wide mapping and cryo-EM structural analyses of the overlapping tri-nucleosome composed of hexasome-hexasome-octasome moieties. Communications biology 7 (1) (2024)
Yuichi Saito, Akihito Harada, Miho Ushijima, Kaori Tanaka, Ryota Higuchi, Akemi Baba, Daisuke Murakami, Stephen L Nutt, Takashi Nakagawa, Yasuyuki Ohkawa, Yoshihiro Baba
Plasma cell differentiation is regulated by the expression of histone variant H3.3. Nature communications 15 (1) (2024)
Hiroshi Sakai, Hideaki Uno, Harumi Yamakawa, Kaori Tanaka, Aoi Ikedo, Akiyoshi Uezumi, Yasuyuki Ohkawa, Yuuki Imai
The androgen receptor in mesenchymal progenitors regulates skeletal muscle mass via Igf1 expression in male mice. Proceedings of the National Academy of Sciences of the United States of America 121 (39) (2024)
Ayato Yamasaki, Iroha Imanishi, Kaori Tanaka, Yasuyuki Ohkawa, Makoto Tsuda, Takahiro Masuda
IRF8 and MAFB drive distinct transcriptional machineries in different resident macrophages of the central nervous system. Communications biology 7 (1) (2024)
Ioana Olan, Masami Ando-Kuri, Aled J Parry, Tetsuya Handa, Stefan Schoenfelder, Peter Fraser, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Masako Narita, Masashi Narita
HMGA1 orchestrates chromatin compartmentalization and sequesters genes into 3D networks coordinating senescence heterogeneity. Nature communications 15 (1) (2024)
Ayato Yamasaki, Iroha Imanishi, Kaori Tanaka, Yasuyuki Ohkawa, Makoto Tsuda, Takahiro Masuda
IRF8 and MAFB drive distinct transcriptional machineries in different resident macrophages of the central nervous system. Communications biology 7 (1) (2024)
Yuichi Saito, Akihito Harada, Miho Ushijima, Kaori Tanaka, Ryota Higuchi, Akemi Baba, Daisuke Murakami, Stephen L Nutt, Takashi Nakagawa, Yasuyuki Ohkawa, Yoshihiro Baba
Plasma cell differentiation is regulated by the expression of histone variant H3.3. Nature communications 15 (1) (2024)
Ioana Olan, Masami Ando-Kuri, Aled J Parry, Tetsuya Handa, Stefan Schoenfelder, Peter Fraser, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Masako Narita, Masashi Narita
HMGA1 orchestrates chromatin compartmentalization and sequesters genes into 3D networks coordinating senescence heterogeneity. Nature communications 15 (1) (2024)
Yuji Nakamura, Issei S Shimada, Reza Maroofian, Micol Falabella, Maha S Zaki, Masanori Fujimoto, Emi Sato, Hiroshi Takase, Shiho Aoki, Akihiko Miyauchi, Eriko Koshimizu, Satoko Miyatake, Yuko Arioka, Mizuki Honda, Takayoshi Higashi, Fuyuki Miya, Yukimune Okubo, Isamu Ogawa, Annarita Scardamaglia, Mohammad Miryounesi, Sahar Alijanpour, Farzad Ahmadabadi, Peter Herkenrath, Hormos Salimi Dafsari, Clara Velmans, Mohammed Al Balwi, Antonio Vitobello, Anne Sophie Denommé-Pichon, Médéric Jeanne, Antoine Civit, Mohamed S Abdel-Hamid, Hamed Naderi, Hossein Darvish, Somayeh Bakhtiari, Michael C Kruer, Christopher J Carroll, Ehsan Ghayoor Karimiani, Rozhgar A Khailany, Talib Adil Abdulqadir, Mehmet Ozaslan, Peter Bauer, Giovanni Zifarelli, Tahere Seifi, Mina Zamani, Chadi Al Alam, Javeria Raza Alvi, Tipu Sultan, Stephanie Efthymiou, Simon A S Pope, Kazuhiro Haginoya, Tamihide Matsunaga, Hitoshi Osaka, Naomichi Matsumoto, Norio Ozaki, Yasuyuki Ohkawa, Shinya Oki, Tatushiko Tsunoda, Robert D S Pitceathly, Yoshitaka Taketomi, Henry Houlden, Makoto Murakami, Yoichi Kato, Shinji Saitoh
Biallelic null variants in PNPLA8 cause microcephaly by reducing the number of basal radial glia. Brain : a journal of neurology (2024)
Masahiro Nishimura, Takeru Fujii, Hiroki Tanaka, Kazumitsu Maehara, Ken Morishima, Masahiro Shimizu, Yuki Kobayashi, Kayo Nozawa, Yoshimasa Takizawa, Masaaki Sugiyama, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Genome-wide mapping and cryo-EM structural analyses of the overlapping tri-nucleosome composed of hexasome-hexasome-octasome moieties. Communications biology 7 (1) (2024)
Ioana Olan, Masami Ando-Kuri, Aled J Parry, Tetsuya Handa, Stefan Schoenfelder, Peter Fraser, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Masako Narita, Masashi Narita
HMGA1 orchestrates chromatin compartmentalization and sequesters genes into 3D networks coordinating senescence heterogeneity. Nature communications 15 (1) (2024)
Ryota Higuchi, Kaori Tanaka, Yuichi Saito, Daisuke Murakami, Takashi Nakagawa, Stephen L Nutt, Yasuyuki Ohkawa, Yoshihiro Baba
Type I interferon promotes the fate of Toll-like receptor 9-stimulated follicular B cells to plasma cell differentiation. PNAS nexus 3 (4) (2024)
Ayato Yamasaki, Iroha Imanishi, Kaori Tanaka, Yasuyuki Ohkawa, Makoto Tsuda, Takahiro Masuda
IRF8 and MAFB drive distinct transcriptional machineries in different resident macrophages of the central nervous system. Communications biology 7 (1) (2024)
Ayato Yamasaki, Iroha Imanishi, Kaori Tanaka, Yasuyuki Ohkawa, Makoto Tsuda, Takahiro Masuda
IRF8 and MAFB drive distinct transcriptional machineries in different resident macrophages of the central nervous system. Communications biology 7 (1) (2024)
Kota Abe, Hikaru Ino, Tomomi Niwa, Daniel Semmy, Ayami Takaochi, Takashi Nishimura, Chihiro Mogi, Maki Uenaka, Masaru Ishii, Kaori Tanaka, Yasuyuki Ohkawa, Tohru Ishitani
Sex-dependent regulation of vertebrate somatic growth and aging by germ cells. Science advances 10 (24) (2024)
Ioana Olan, Masami Ando-Kuri, Aled J Parry, Tetsuya Handa, Stefan Schoenfelder, Peter Fraser, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Masako Narita, Masashi Narita
HMGA1 orchestrates chromatin compartmentalization and sequesters genes into 3D networks coordinating senescence heterogeneity. Nature communications 15 (1) (2024)
Kosuke Tomimatsu, Takeru Fujii, Ryoma Bise, Kazufumi Hosoda, Yosuke Taniguchi, Hiroshi Ochiai, Hiroaki Ohishi, Kanta Ando, Ryoma Minami, Kaori Tanaka, Taro Tachibana, Seiichi Mori, Akihito Harada, Kazumitsu Maehara, Masao Nagasaki, Seiichi Uchida, Hitoshi Kurumizaka, Masashi Narita, Yasuyuki Ohkawa
Precise immunofluorescence canceling for highly multiplexed imaging to capture specific cell states. Nature communications 15 (1) (2024)
Yuichi Saito, Akihito Harada, Miho Ushijima, Kaori Tanaka, Ryota Higuchi, Akemi Baba, Daisuke Murakami, Stephen L Nutt, Takashi Nakagawa, Yasuyuki Ohkawa, Yoshihiro Baba
Plasma cell differentiation is regulated by the expression of histone variant H3.3. Nature communications 15 (1) (2024)
Takeshi Wakasa, Kentaro Nonaka, Akihito Harada, Yasuyuki Ohkawa, Chie Kikutake, Mikita Suyama, Takashi Kobunai, Kenta Tsunekuni, Kazuaki Matsuoka, Yuki Kataoka, Hiroaki Ochiiwa, Kazutaka Miyadera, Takeshi Sagara, Eiji Oki, Shigehiro Ohdo, Yoshihiko Maehara, Makoto Iimori, Hiroyuki Kitao
The anti-tumor effect of trifluridine via induction of aberrant mitosis is unaffected by mutations modulating p53 activity. Cell death discovery 10 (1) (2024)
Shizuka Miura, Kenichi Horisawa, Tokuko Iwamori, Satoshi Tsujino, Kazuya Inoue, Satsuki Karasawa, Junpei Yamamoto, Yasuyuki Ohkawa, Sayaka Sekiya, Atsushi Suzuki
Hepatocytes differentiate into intestinal epithelial cells through a hybrid epithelial/mesenchymal cell state in culture. Nature communications 15 (1) (2024)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Author Correction: Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature (2023)
Tetsuya Handa, Akihito Harada, Kazumitsu Maehara, Shoko Sato, Masaru Nakao, Naoki Goto, Hitoshi Kurumizaka, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Author Correction: Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input. Nature protocols (2023)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Miki Inoue, Takashi Baba, Fumiya Takahashi, Miho Terao, Shogo Yanai, Yuichi Shima, Daisuke Saito, Kei Sugihara, Takashi Miura, Shuji Takada, Mikita Suyama, Yasuyuki Ohkawa, Ken-Ichirou Morohashi
Tmsb10 triggers fetal Leydig differentiation by suppressing the RAS/ERK pathway. Communications biology 5 (1) (2022)
Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, Jieru Li, Yuko Sato, Manabu Shintani, Hitoshi Owada, Yasuyuki Ohkawa, Alexandros Pertsinidis, Takashi Yamamoto, Hitoshi Kurumizaka, Hiroshi Ochiai
STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity. Nature communications 13 (1) (2022)
Seiya Hirai, Kosuke Tomimatsu, Atsuko Miyawaki-Kuwakado, Yoshimasa Takizawa, Tetsuro Komatsu, Taro Tachibana, Yutaro Fukushima, Yasuko Takeda, Lumi Negishi, Tomoya Kujirai, Masako Koyama, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant. Nucleic acids research 50 (1) (2022)
Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, Jieru Li, Yuko Sato, Manabu Shintani, Hitoshi Owada, Yasuyuki Ohkawa, Alexandros Pertsinidis, Takashi Yamamoto, Hitoshi Kurumizaka, Hiroshi Ochiai
STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity. Nature communications 13 (1) (2022)
Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, Jieru Li, Yuko Sato, Manabu Shintani, Hitoshi Owada, Yasuyuki Ohkawa, Alexandros Pertsinidis, Takashi Yamamoto, Hitoshi Kurumizaka, Hiroshi Ochiai
STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity. Nature communications 13 (1) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Keita Kohno, Ryoji Shirasaka, Kohei Yoshihara, Satsuki Mikuriya, Kaori Tanaka, Keiko Takanami, Kazuhide Inoue, Hirotaka Sakamoto, Yasuyuki Ohkawa, Takahiro Masuda, Makoto Tsuda
A spinal microglia population involved in remitting and relapsing neuropathic pain. Science (New York, N.Y.) 376 (6588) (2022)
Thomas Fleming, Yukiko Kikuchi, Mikoto Nakajo, Masaya Tachizawa, Tomoaki Inazumi, Soken Tsuchiya, Yukihiko Sugimoto, Daisuke Saito, Mikita Suyama, Yasuyuki Ohkawa, Takashi Baba, Ken-Ichirou Morohashi, Kataaki Okubo
Prostaglandin E 2 receptor Ptger4b regulates female-specific peptidergic neurons and female sexual receptivity in medaka. Communications biology 5 (1) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature (2022)
Yoko Hayashi-Takanaka, Yuichiro Hayashi, Yasuhiro Hirano, Atsuko Miyawaki-Kuwakado, Yasuyuki Ohkawa, Chikashi Obuse, Hitoshi Kurumizaka, Tokuko Haraguchi, Yasushi Hiraoka
Chromatin loading of MCM hexamers is associated with di-/tri-methylation of histone H4K20 toward S phase entry. Nucleic acids research 49 (21) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, Jieru Li, Yuko Sato, Manabu Shintani, Hitoshi Owada, Yasuyuki Ohkawa, Alexandros Pertsinidis, Takashi Yamamoto, Hitoshi Kurumizaka, Hiroshi Ochiai
STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity. Nature communications 13 (1) (2022)
Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, Jieru Li, Yuko Sato, Manabu Shintani, Hitoshi Owada, Yasuyuki Ohkawa, Alexandros Pertsinidis, Takashi Yamamoto, Hitoshi Kurumizaka, Hiroshi Ochiai
STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity. Nature communications 13 (1) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature (2022)
Kazumitsu Maehara, Kosuke Tomimatsu, Akihito Harada, Kaori Tanaka, Shoko Sato, Megumi Fukuoka, Seiji Okada, Tetsuya Handa, Hitoshi Kurumizaka, Noriko Saitoh, Hitoshi Kurumizaka, Yasuyuki Ohkawa
Modeling population size independent tissue epigenomes by ChIL-seq with single thin sections. Molecular systems biology 17 (11) (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature (2022)
Victoria Moiseeva, Andrés Cisneros, Valentina Sica, Oleg Deryagin, Yiwei Lai, Sascha Jung, Eva Andrés, Juan An, Jessica Segalés, Laura Ortet, Vera Lukesova, Giacomo Volpe, Alberto Benguria, Ana Dopazo, Salvador Aznar Benitah, Yasuteru Urano, Antonio Del Sol, Miguel Angel Esteban, Yasuyuki Ohkawa, Antonio L Serrano, Eusebio Perdiguero, Pura Muñoz-Cánoves
Senescence atlas reveals an aged-like inflamed niche that blunts muscle regeneration. Nature 613 (7942) (2022)
Sjoerd J D Tjalsma, Mayako Hori, Yuko Sato, Aurelie Bousard, Akito Ohi, Ana Cláudia Raposo, Julia Roensch, Agnes Le Saux, Jumpei Nogami, Kazumitsu Maehara, Tomoya Kujirai, Tetsuya Handa, Sandra Bagés-Arnal, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Simão Teixeira da Rocha, Jan Jakub Żylicz, Hitoshi Kurumizaka, Edith Heard
H4K20me1 and H3K27me3 are concurrently loaded onto the inactive X chromosome but dispensable for inducing gene silencing. EMBO reports 22 (3) (2021)
Hiroaki Tachiwana, Mariko Dacher, Kazumitsu Maehara, Akihito Harada, Yosuke Seto, Ryohei Katayama, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Hitoshi Kurumizaka, Noriko Saitoh
Chromatin structure-dependent histone incorporation revealed by a genome-wide deposition assay. eLife 10 (2021)
Takeru Fujii, Kazumitsu Maehara, Masatoshi Fujita, Yasuyuki Ohkawa
Discriminative feature of cells characterizes cell populations of interest by a small subset of genes. PLoS computational biology 17 (11) (2021)
Qianmei Wu, Takeru Fujii, Akihito Harada, Kosuke Tomimatsu, Atsuko Miyawaki-Kuwakado, Masatoshi Fujita, Kazumitsu Maehara, Yasuyuki Ohkawa
Genome-wide analysis of chromatin structure changes upon MyoD binding in proliferative myoblasts during the cell cycle. Journal of biochemistry 169 (6) (2021)
Mizuki Honda, Shinya Oki, Ryuichi Kimura, Akihito Harada, Kazumitsu Maehara, Kaori Tanaka, Chikara Meno, Yasuyuki Ohkawa
High-depth spatial transcriptome analysis by photo-isolation chemistry. Nature communications 12 (1) (2021)
Satoshi Uchino, Yuma Ito, Yuko Sato, Tetsuya Handa, Yasuyuki Ohkawa, Makio Tokunaga, Hitoshi Kurumizaka
Live imaging of transcription sites using an elongating RNA polymerase II-specific probe. The Journal of cell biology 221 (2) (2021)
Atsuko Miyawaki-Kuwakado, Qianmei Wu, Akihito Harada, Kosuke Tomimatsu, Takeru Fujii, Kazumitsu Maehara, Yasuyuki Ohkawa
Transcriptome analysis of gene expression changes upon enzymatic dissociation in skeletal myoblasts. Genes to cells : devoted to molecular & cellular mechanisms 26 (7) (2021)
Shogo Yanai, Takashi Baba, Kai Inui, Kanako Miyabayashi, Soyun Han, Miki Inoue, Fumiya Takahashi, Yoshiakira Kanai, Yasuyuki Ohkawa, Man Ho Choi, Ken-Ichirou Morohashi
Gene expression and functional abnormalities in XX/Sry Leydig cells. Scientific reports 11 (1) (2021)
Daniel A Bartlett, Vishnu Dileep, Tetsuya Handa, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Steven Henikoff, David M Gilbert
High-throughput single-cell epigenomic profiling by targeted insertion of promoters (TIP-seq). The Journal of cell biology 220 (12) (2021)
Kiyoshi Yoshioka, Hiroshi Nagahisa, Fumihito Miura, Hiromitsu Araki, Yasutomi Kamei, Yasuo Kitajima, Daiki Seko, Jumpei Nogami, Yoshifumi Tsuchiya, Narihiro Okazaki, Akihiko Yonekura, Seigo Ohba, Yoshinori Sumita, Ko Chiba, Kosei Ito, Izumi Asahina, Yoshihiro Ogawa, Takashi Ito, Yasuyuki Ohkawa, Yusuke Ono
Hoxa10 mediates positional memory to govern stem cell function in adult skeletal muscle. Science advances 7 (24) (2021)
Tetsuya Handa, Akihito Harada, Kazumitsu Maehara, Shoko Sato, Masaru Nakao, Naoki Goto, Hitoshi Kurumizaka, Yasuyuki Ohkawa, Hitoshi Kurumizaka
Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input. Nature protocols 15 (10) (2020)
Yuki Sakamoto, Mayuko Sato, Yoshikatsu Sato, Akihito Harada, Takamasa Suzuki, Chieko Goto, Kentaro Tamura, Kiminori Toyooka, Hitoshi Kurumizaka, Yasuyuki Ohkawa, Ikuko Hara-Nishimura, Shingo Takagi, Sachihiro Matsunaga
Subnuclear gene positioning through lamina association affects copper tolerance. Nature communications 11 (1) (2020)
Hiroki Inada, Miyako Udono, Kanae Matsuda-Ito, Kenichi Horisawa, Yasuyuki Ohkawa, Shizuka Miura, Takeshi Goya, Junpei Yamamoto, Masao Nagasaki, Kazuko Ueno, Daisuke Saitou, Mikita Suyama, Yoshihiko Maehara, Wataru Kumamaru, Yoshihiro Ogawa, Sayaka Sekiya, Atsushi Suzuki
Direct reprogramming of human umbilical vein- and peripheral blood-derived endothelial cells into hepatic progenitor cells. Nature communications 11 (1) (2020)
Hiroshi Ochiai, Tetsutaro Hayashi, Mana Umeda, Mika Yoshimura, Akihito Harada, Yukiko Shimizu, Kenta Nakano, Noriko Saitoh, Zhe J Liu, Takashi Yamamoto, Tadashi Okamura, Yasuyuki Ohkawa, Hitoshi Kurumizaka, Itoshi Nikaido
Genome-wide kinetic properties of transcriptional bursting in mouse embryonic stem cells. Science advances 6 (25) (2020)
Daijiro Konno, Chiaki Kishida, Kazumitsu Maehara, Yasuyuki Ohkawa, Hiroshi Kiyonari, Seiji Okada, Fumio Matsuzaki
Dmrt factors determine the positional information of cerebral cortical progenitors via differential suppression of homeobox genes. Development (Cambridge, England) 146 (15) (2019)
Kazu Kobayakawa, Yasuyuki Ohkawa, Shingo Yoshizaki, Tetsuya Tamaru, Takeyuki Saito, Ken Kijima, Kazuya Yokota, Masamitsu Hara, Kensuke Kubota, Yoshihiro Matsumoto, Katsumi Harimaya, Keiko Ozato, Takahiro Masuda, Makoto Tsuda, Tomohiko Tamura, Kazuhide Inoue, V Reggie Edgerton, Yukihide Iwamoto, Yasuharu Nakashima, Seiji Okada
Macrophage centripetal migration drives spontaneous healing process after spinal cord injury. Science advances 5 (5) (2019)
Yoshimasa Takizawa, Hiroki Tanaka, Shinichi Machida, Masako Koyama, Kazumitsu Maehara, Yasuyuki Ohkawa, Paul A Wade, Matthias Wolf, Hitoshi Kurumizaka
Cryo-EM structure of the nucleosome containing the ALB1 enhancer DNA sequence. Open biology 8 (3) (2019)
Yu-Taro Noguchi, Miki Nakamura, Nobumasa Hino, Jumpei Nogami, Sayaka Tsuji, Takahiko Sato, Lidan Zhang, Kazutake Tsujikawa, Toru Tanaka, Kohei Izawa, Yoshiaki Okada, Takefumi Doi, Hiroki Kokubo, Akihito Harada, Akiyoshi Uezumi, Manfred Gessler, Yasuyuki Ohkawa, So-Ichiro Fukada
Cell-autonomous and redundant roles of Hey1 and HeyL in muscle stem cells: HeyL requires Hes1 to bind diverse DNA sites. Development (Cambridge, England) 146 (4) (2019)
Takashi Kozuka, Yoshihiro Omori, Satoshi Watanabe, Etsuko Tarusawa, Haruka Yamamoto, Taro Chaya, Mayu Furuhashi, Makiko Morita, Tetsuya Sato, Shinichi Hirose, Yasuyuki Ohkawa, Yumiko Yoshimura, Takatoshi Hikida, Takahisa Furukawa
miR-124 dosage regulates prefrontal cortex function by dopaminergic modulation. Scientific reports 9 (1) (2019)
Mayo Araki, Massanori Kurihara, Suzuko Kinoshita, Rie Awane, Tetsuya Sato, Yasuyuki Ohkawa, Yoshihiro H Inoue
Anti-tumour effects of antimicrobial peptides, components of the innate immune system, against haematopoietic tumours in Drosophila mxc mutants. Disease models & mechanisms 12 (6) (2019)
Masahiro Oka, Sonoko Mura, Mayumi Otani, Yoichi Miyamoto, Jumpei Nogami, Kazumitsu Maehara, Akihito Harada, Taro Tachibana, Yoshihiro Yoneda, Yasuyuki Ohkawa
Chromatin-bound CRM1 recruits SET-Nup214 and NPM1c onto HOX clusters causing aberrant HOX expression in leukemia cells. eLife 8 (2019)
Kensuke Kudou, Tetsuro Komatsu, Jumpei Nogami, Kazumitsu Maehara, Akihito Harada, Hiroshi Saeki, Eiji Oki, Yoshihiko Maehara, Yasuyuki Ohkawa
The requirement of Mettl3-promoted MyoD mRNA maintenance in proliferative myoblasts for skeletal muscle differentiation. Open biology 7 (9) (2018)
Yukari Kondo, Shinichiro Higa, Takeshi Iwasaki, Tomoya Matsumoto, Kazumitsu Maehara, Akihito Harada, Yoshihiro Baba, Masatoshi Fujita, Yasuyuki Ohkawa
Sensitive detection of fluorescence in western blotting by merging images. PloS one 13 (1) (2018)
Akihito Harada, Kazumitsu Maehara, Yusuke Ono, Hiroyuki Taguchi, Kiyoshi Yoshioka, Yasuo Kitajima, Yan Xie, Yuko Sato, Takeshi Iwasaki, Jumpei Nogami, Seiji Okada, Tetsuro Komatsu, Yuichiro Semba, Tatsuya Takemoto, Hiroshi Kimura, Hitoshi Kurumizaka, Yasuyuki Ohkawa
Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration. Nature communications 9 (1) (2018)
Makiko Ueda, Tetsuya Sato, Yasuyuki Ohkawa, Yoshihiro H Inoue
Identification of miR-305, a microRNA that promotes aging, and its target mRNAs in Drosophila. Genes to cells : devoted to molecular & cellular mechanisms 23 (2) (2018)
Akihito Harada, Kazumitsu Maehara, Tetsuya Handa, Yasuhiro Arimura, Jumpei Nogami, Yoko Hayashi-Takanaka, Katsuhiko Shirahige, Hitoshi Kurumizaka, Hitoshi Kurumizaka, Yasuyuki Ohkawa
A chromatin integration labelling method enables epigenomic profiling with lower input. Nature cell biology 21 (2) (2018)
Masamitsu Hara, Kazu Kobayakawa, Yasuyuki Ohkawa, Hiromi Kumamaru, Kazuya Yokota, Takeyuki Saito, Ken Kijima, Shingo Yoshizaki, Katsumi Harimaya, Yasuharu Nakashima, Seiji Okada
Interaction of reactive astrocytes with type I collagen induces astrocytic scar formation through the integrin-N-cadherin pathway after spinal cord injury. Nature medicine 23 (7) (2017)
Kouhei Shimaji, Ryo Tanaka, Toru Maeda, Mamiko Ozaki, Hideki Yoshida, Yasuyuki Ohkawa, Tetsuya Sato, Mikita Suyama, Masamitsu Yamaguchi
Histone methyltransferase G9a is a key regulator of the starvation-induced behaviors in Drosophila melanogaster. Scientific reports 7 (1) (2017)
Yuki Kuniyoshi, Kazumitsu Maehara, Takeshi Iwasaki, Masayasu Hayashi, Yuichiro Semba, Masatoshi Fujita, Yuko Sato, Hiroshi Kimura, Akihito Harada, Yasuyuki Ohkawa
Identification of Immunoglobulin Gene Sequences from a Small Read Number of mRNA-Seq Using Hybridomas. PloS one 11 (10) (2016)

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Yasuyuki Ohkawa