Ying Zhang

ResearcherID Scopus Author ID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 28

Top Topics

Escherichia Coli

Wastewater Treatment

Top Venues

Applied and environmental microbiology

The Journal of neuroscience : the official journal of the Society for Neuroscience

This page only lists publications with an associated author ORCID identifier.

Publications

Katie L Dunton, Nathan G Hedrick, Saber Meamardoost, Chi Ren, James R Howe, Jing Wang, Cory M Root, Rudiyanto Gunawan, Takaki Komiyama, Ying Zhang, Eun Jung Hwang
Divergent Learning-Related Transcriptional States of Cortical Glutamatergic Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience 44 (10) (2024)
Katie L Dunton, Nathan G Hedrick, Saber Meamardoost, Chi Ren, James R Howe, Jing Wang, Cory M Root, Rudiyanto Gunawan, Takaki Komiyama, Ying Zhang, Eun Jung Hwang
Divergent Learning-Related Transcriptional States of Cortical Glutamatergic Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience 44 (10) (2024)
Katie L Dunton, Nathan G Hedrick, Saber Meamardoost, Chi Ren, James R Howe, Jing Wang, Cory M Root, Rudiyanto Gunawan, Takaki Komiyama, Ying Zhang, Eun Jung Hwang
Divergent Learning-Related Transcriptional States of Cortical Glutamatergic Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience 44 (10) (2024)
Katie L Dunton, Nathan G Hedrick, Saber Meamardoost, Chi Ren, James R Howe, Jing Wang, Cory M Root, Rudiyanto Gunawan, Takaki Komiyama, Ying Zhang, Eun Jung Hwang
Divergent Learning-Related Transcriptional States of Cortical Glutamatergic Neurons. The Journal of neuroscience : the official journal of the Society for Neuroscience 44 (10) (2024)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Sarah P Esser, Janina Rahlff, Weishu Zhao, Michael Predl, Julia Plewka, Katharina Sures, Franziska Wimmer, Janey Lee, Panagiotis S Adam, Julia McGonigle, Victoria Turzynski, Indra Banas, Katrin Schwank, Mart Krupovic, Till L V Bornemann, Perla Abigail Figueroa-Gonzalez, Jessica K Jarett, Thomas Rattei, Yuki Amano, Ian K Blaby, Jan-Fang Cheng, William J Brazelton, Chase L Beisel, Tanja Woyke, Ying Zhang, Alexander J Probst
A predicted CRISPR-mediated symbiosis between uncultivated archaea. Nature microbiology (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Cecile M Cres, Andrew Tritt, Kristofer E Bouchard, Ying Zhang
DL-TODA: A Deep Learning Tool for Omics Data Analysis. Biomolecules 13 (4) (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Cecile M Cres, Andrew Tritt, Kristofer E Bouchard, Ying Zhang
DL-TODA: A Deep Learning Tool for Omics Data Analysis. Biomolecules 13 (4) (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Cecile M Cres, Andrew Tritt, Kristofer E Bouchard, Ying Zhang
DL-TODA: A Deep Learning Tool for Omics Data Analysis. Biomolecules 13 (4) (2023)
Jason L Vailionis, Weishu Zhao, Ke Zhang, Dmitry A Rodionov, Gina L Lipscomb, Tania N N Tanwee, Hailey C O'Quinn, Ryan G Bing, Robert M Kelly, Michael W W Adams, Ying Zhang
Optimizing Strategies for Bio-Based Ethanol Production Using Genome-Scale Metabolic Modeling of the Hyperthermophilic Archaeon, Pyrococcus furiosus. Applied and environmental microbiology (2023)
Tania N N Tanwee, Gina L Lipscomb, Jason L Vailionis, Ke Zhang, Ryan G Bing, Hailey C O'Quinn, Farris L Poole, Ying Zhang, Robert M Kelly, Michael W W Adams
Metabolic engineering of Caldicellulosiruptor bescii for 2,3-butanediol production from unpretreated lignocellulosic biomass and metabolic strategies for improving yields and titers. Applied and environmental microbiology 90 (1) (2023)
Gina L Lipscomb, Alexander T Crowley, Diep M N Nguyen, Matthew W Keller, Hailey C O'Quinn, Tania N N Tanwee, Jason L Vailionis, Ke Zhang, Ying Zhang, Robert M Kelly, Michael W W Adams
Manipulating Fermentation Pathways in the Hyperthermophilic Archaeon Pyrococcus furiosus for Ethanol Production up to 95°C Driven by Carbon Monoxide Oxidation. Applied and environmental microbiology (2023)
Fangyu Liu, Saber Meamardoost, Rudiyanto Gunawan, Takaki Komiyama, Claudia Mewes, Ying Zhang, Eun Jung Hwang, Linbing Wang
Deep learning for neural decoding in motor cortex. Journal of neural engineering 19 (5) (2022)
James R Crosby, Tunyaboon Laemthong, Ryan G Bing, Ke Zhang, Tania N N Tanwee, Gina L Lipscomb, Dmitry A Rodionov, Ying Zhang, Michael W W Adams, Robert M Kelly
Biochemical and Regulatory Analyses of Xylanolytic Regulons in Caldicellulosiruptor bescii Reveal Genus-Wide Features of Hemicellulose Utilization. Applied and environmental microbiology 88 (21) (2022)
Zachary T Pimentel, Patricia S Thibodeau, Bongkeun Song, Ying Zhang
A Mollicutes Metagenome-Assembled Genome from the Gut of the Pteropod Limacina rangii . Microbiology resource announcements (2022)
Keith Dufault-Thompson, Chang Nie, Huahua Jian, Feng-Ping Wang, Ying Zhang
Reconstruction and Analysis of Thermodynamically Constrained Models Reveal Metabolic Responses of a Deep-Sea Bacterium to Temperature Perturbations. mSystems 7 (4) (2022)
Zachary T Pimentel, Keith Dufault-Thompson, Kayla T Russo, Abigail K Scro, Roxanna M Smolowitz, Marta Gomez-Chiarri, Ying Zhang
Microbiome Analysis Reveals Diversity and Function of Mollicutes Associated with the Eastern Oyster, Crassostrea virginica. mSphere 6 (3) (2021)
Fatma Gomaa, Daniel R Utter, Christopher Powers, David J Beaudoin, Virginia P Edgcomb, Helena L Filipsson, Colleen M Hansel, Scott D Wankel, Ying Zhang, Joan M Bernhard
Multiple integrated metabolic strategies allow foraminiferan protists to thrive in anoxic marine sediments. Science advances 7 (22) (2021)
Matthew E Mokszycki, Mary Leatham-Jensen, Jon L Steffensen, Ying Zhang, Karen Angeliki Krogfelt, Matthew E Caldwell, Tyrrell Conway, Paul S Cohen
A Simple In Vitro Gut Model for Studying the Interaction between Escherichia coli and the Intestinal Commensal Microbiota in Cecal Mucus. Applied and environmental microbiology 84 (24) (2018)
Jon Lund Steffensen, Keith Dufault-Thompson, Ying Zhang
FindPrimaryPairs: An efficient algorithm for predicting element-transferring reactant/product pairs in metabolic networks. PloS one 13 (2) (2018)
Keith Dufault-Thompson, Huahua Jian, Ruixue Cheng, Jiefu Li, Fengping Wang, Ying Zhang
A Genome-Scale Model of Shewanella piezotolerans Simulates Mechanisms of Metabolic Diversity and Energy Conservation. mSystems 2 (2) (2017)