Yu Takano

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 27

Top Venues

International journal of molecular sciences

Biomolecules

Molecules (Basel, Switzerland)

Proceedings of the National Academy of Sciences of the United States of America

Hiroshima City University

Osaka University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Hiroshima City University Apr 01 2015

Japan

Professor :: Graduate School of Information Sciences

Osaka University Apr 01 2007 - Mar 31 2015

Japan

Assistant Professor :: Institute for Protein Research

Osaka University Jun 01 2005 - Mar 31 2007

Japan

Instructor :: Institute for Protein Research

Osaka University Apr 01 2005 - May 31 2005

Japan

Postdoctral fellow :: Institute for Protein Research

Mie University Feb 01 2005 - Mar 31 2005

Japan

Postdoctral fellow :: Department of Engineering

University of California Los Angeles Apr 01 2002 - Jan 31 2005

United States

Postdoctoral fellow :: Department of Chemistry and Biochemistry

Education History

Osaka University Apr 01 1999 - Mar 31 2002

Japan

PHD :: Department of Chemistry, Graduate School of Science

Osaka University Apr 01 1997 - Mar 31 1999

Japan

MSC :: Department of Chemistry, Graduate School of Science

Osaka University Apr 01 1993 - Mar 31 1997

Japan

BSC :: Faculty of Science

Publications

Shunya Suenaga, Yu Takano, Toru Saito
Unraveling Binding Mechanism and Stability of Urease Inhibitors: A QM/MM MD Study. Molecules (Basel, Switzerland) 28 (6) (2023)
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, Yuichi Kabaya, Yusuke Kanematsu, Yu Takano
Prediction of Protein Function from Tertiary Structure of the Active Site in Heme Proteins by Convolutional Neural Network. Biomolecules 13 (1) (2023)
Shunya Suenaga, Yu Takano, Toru Saito
Unraveling Binding Mechanism and Stability of Urease Inhibitors: A QM/MM MD Study. Molecules (Basel, Switzerland) 28 (6) (2023)
Shunya Suenaga, Yu Takano, Toru Saito
Unraveling Binding Mechanism and Stability of Urease Inhibitors: A QM/MM MD Study. Molecules (Basel, Switzerland) 28 (6) (2023)
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, Yuichi Kabaya, Yusuke Kanematsu, Yu Takano
Prediction of Protein Function from Tertiary Structure of the Active Site in Heme Proteins by Convolutional Neural Network. Biomolecules 13 (1) (2023)
Yu Takano, Hiroko X Kondo, Haruki Nakamura
Quantum chemical studies on hydrogen bonds in helical secondary structures. Biophysical reviews 14 (6) (2023)
Yusuke Kanematsu, Hiroko X Kondo, Yu Takano
Computational Exploration of Minimum Energy Reaction Pathway of N 2 O Formation from Intermediate I of P450nor Using an Active Center Model. International journal of molecular sciences 24 (24) (2023)
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, Yuichi Kabaya, Yusuke Kanematsu, Yu Takano
Prediction of Protein Function from Tertiary Structure of the Active Site in Heme Proteins by Convolutional Neural Network. Biomolecules 13 (1) (2023)
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, Yuichi Kabaya, Yusuke Kanematsu, Yu Takano
Prediction of Protein Function from Tertiary Structure of the Active Site in Heme Proteins by Convolutional Neural Network. Biomolecules 13 (1) (2023)
Yu Takano, Hiroko X Kondo, Haruki Nakamura
Quantum chemical studies on hydrogen bonds in helical secondary structures. Biophysical reviews 14 (6) (2023)
Yusuke Kanematsu, Hiroko X Kondo, Yu Takano
Computational Exploration of Minimum Energy Reaction Pathway of N 2 O Formation from Intermediate I of P450nor Using an Active Center Model. International journal of molecular sciences 24 (24) (2023)
Hiroko X Kondo, Hiroyuki Iizuka, Gen Masumoto, Yuichi Kabaya, Yusuke Kanematsu, Yu Takano
Elucidation of the Correlation between Heme Distortion and Tertiary Structure of the Heme-Binding Pocket Using a Convolutional Neural Network. Biomolecules 12 (9) (2022)
Hiroko X Kondo, Haruki Nakamura, Yu Takano
Depolarizing Effects in Hydrogen Bond Energy in 3 10 -Helices Revealed by Quantum Chemical Analysis. International journal of molecular sciences 23 (16) (2022)
Toru Saito, Yu Takano
QM/MM Molecular Dynamics Simulations Revealed Catalytic Mechanism of Urease. The journal of physical chemistry. B 126 (10) (2022)
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, Genji Kurisu, Hiroko X Kondo, Yu Takano
Effects of Active-Center Reduction of Plant-Type Ferredoxin on Its Structure and Dynamics: Computational Analysis Using Molecular Dynamics Simulations. International journal of molecular sciences 23 (24) (2022)
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, Genji Kurisu, Hiroko X Kondo, Yu Takano
Effects of Active-Center Reduction of Plant-Type Ferredoxin on Its Structure and Dynamics: Computational Analysis Using Molecular Dynamics Simulations. International journal of molecular sciences 23 (24) (2022)
Tomoki Nakayoshi, Koichi Kato, Eiji Kurimoto, Yu Takano, Akifumi Oda
Predicting Reaction Mechanisms for the Threonine-Residue Stereoinversion Catalyzed by a Dihydrogen Phosphate Ion. ACS omega 7 (22) (2022)
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, Genji Kurisu, Hiroko X Kondo, Yu Takano
Effects of Active-Center Reduction of Plant-Type Ferredoxin on Its Structure and Dynamics: Computational Analysis Using Molecular Dynamics Simulations. International journal of molecular sciences 23 (24) (2022)
Hiroko X Kondo, Yu Takano
Analysis of Fluctuation in the Heme-Binding Pocket and Heme Distortion in Hemoglobin and Myoglobin. Life (Basel, Switzerland) 12 (2) (2022)
Tomoki Nakayoshi, Yusuke Ohnishi, Hideaki Tanaka, Genji Kurisu, Hiroko X Kondo, Yu Takano
Effects of Active-Center Reduction of Plant-Type Ferredoxin on Its Structure and Dynamics: Computational Analysis Using Molecular Dynamics Simulations. International journal of molecular sciences 23 (24) (2022)
Yusuke Kanematsu, Akihiro Narita, Toshiro Oda, Ryotaro Koike, Motonori Ota, Yu Takano, Kei Moritsugu, Ikuko Fujiwara, Kotaro Tanaka, Hideyuki Komatsu, Takayuki Nagae, Nobuhisa Watanabe, Mitsusada Iwasa, Yuichiro Maéda, Shuichi Takeda
Structures and mechanisms of actin ATP hydrolysis. Proceedings of the National Academy of Sciences of the United States of America 119 (43) (2022)
Hiroko X Kondo, Masanori Fujii, Takuma Tanioka, Yusuke Kanematsu, Takashi Yoshida, Yu Takano
Global Analysis of Heme Proteins Elucidates the Correlation between Heme Distortion and the Heme-Binding Pocket. Journal of chemical information and modeling 62 (4) (2022)
Takashi Nomura, Tetsunari Kimura, Yusuke Kanematsu, Daichi Yamada, Keitaro Yamashita, Kunio Hirata, Go Ueno, Hironori Murakami, Tamao Hisano, Raika Yamagiwa, Hanae Takeda, Chai Gopalasingam, Ryota Kousaka, Sachiko Yanagisawa, Osami Shoji, Takashi Kumasaka, Masaki Yamamoto, Yu Takano, Hiroshi Sugimoto, Takehiko Tosha, Minoru Kubo, Yoshitsugu Shiro
Short-lived intermediate in N2O generation by P450 NO reductase captured by time-resolved IR spectroscopy and XFEL crystallography. Proceedings of the National Academy of Sciences of the United States of America 118 (21) (2021)
Hiroko X Kondo, Ayumi Kusaka, Colin K Kitakawa, Jinta Onari, Shusuke Yamanaka, Haruki Nakamura, Yu Takano
Hydrogen bond donors and acceptors are generally depolarized in α-helices as revealed by a molecular tailoring approach. Journal of computational chemistry 40 (23) (2019)
Hiroko X Kondo, Ryo Kiribayashi, Daisuke Kuroda, Jiro Kohda, Akimitsu Kugimiya, Yasuhisa Nakano, Kouhei Tsumoto, Yu Takano
Effects of a remote mutation from the contact paratope on the structure of CDR-H3 in the anti-HIV neutralizing antibody PG16. Scientific reports 9 (1) (2019)
Toru Saito, Manami Fujiwara, Yu Takano
Quantitative Assessment of rPM6 for Fluorine- and Chlorine-Containing Metal Complexes: Comparison with Experimental, First-Principles, and Other Semiempirical Results. Molecules (Basel, Switzerland) 23 (12) (2018)
Yasuhiro Imada, Haruki Nakamura, Yu Takano
Density functional study of porphyrin distortion effects on redox potential of heme. Journal of computational chemistry 39 (3) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Yu Takano