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Yuxuan Du
ORCID
Publication Activity (10 Years)
Years Active: 2022-2024
Publications (10 Years): 8
Top Topics
Genome Editing
Pseudomonas Aeruginosa
Anaerobic Digestion
Electronic Health Record
Top Venues
Nature communications
Journal of computational biology : a journal of computational molecular cell biology
Bioinformatics (Oxford, England)
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This page only lists publications with an associated author ORCID identifier.
Publications
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Yuxuan Du
,
Wenxuan Zuo
,
Fengzhu Sun
Imputing Metagenomic Hi-C Contacts Facilitates the Integrative Contig Binning Through Constrained Random Walk with Restart.
Journal of computational biology : a journal of computational molecular cell biology
(2024)
Yuxuan Du
,
Jed A Fuhrman
,
Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data.
Nature communications
14 (1) (2023)
Yuxuan Du
,
Jed A Fuhrman
,
Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data.
Nature communications
14 (1) (2023)
Yuxuan Du
,
Fengzhu Sun
MetaCC allows scalable and integrative analyses of both long-read and short-read metagenomic Hi-C data.
Nature communications
14 (1) (2023)
Yuxuan Du
,
Jed A Fuhrman
,
Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data.
Nature communications
14 (1) (2023)
Yuxuan Du
,
Jed A Fuhrman
,
Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data.
Nature communications
14 (1) (2023)
Yuxuan Du
,
Sarah M Laperriere
,
Jed Fuhrman
,
Fengzhu Sun
Normalizing Metagenomic Hi-C Data and Detecting Spurious Contacts Using Zero-Inflated Negative Binomial Regression.
Journal of computational biology : a journal of computational molecular cell biology
29 (2) (2022)
Yuxuan Du
,
Fengzhu Sun
HiFine: integrating Hi-C-based and shotgun-based methods to refine binning of metagenomic contigs.
Bioinformatics (Oxford, England)
38 (11) (2022)