Yuxuan Du

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 8

Top Topics

Pseudomonas Aeruginosa

Anaerobic Digestion

Electronic Health Record

Top Venues

Nature communications

Journal of computational biology : a journal of computational molecular cell biology

Bioinformatics (Oxford, England)

This page only lists publications with an associated author ORCID identifier.

Publications

Yuxuan Du, Wenxuan Zuo, Fengzhu Sun
Imputing Metagenomic Hi-C Contacts Facilitates the Integrative Contig Binning Through Constrained Random Walk with Restart. Journal of computational biology : a journal of computational molecular cell biology (2024)
Yuxuan Du, Jed A Fuhrman, Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data. Nature communications 14 (1) (2023)
Yuxuan Du, Jed A Fuhrman, Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data. Nature communications 14 (1) (2023)
Yuxuan Du, Fengzhu Sun
MetaCC allows scalable and integrative analyses of both long-read and short-read metagenomic Hi-C data. Nature communications 14 (1) (2023)
Yuxuan Du, Jed A Fuhrman, Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data. Nature communications 14 (1) (2023)
Yuxuan Du, Jed A Fuhrman, Fengzhu Sun
ViralCC retrieves complete viral genomes and virus-host pairs from metagenomic Hi-C data. Nature communications 14 (1) (2023)
Yuxuan Du, Sarah M Laperriere, Jed Fuhrman, Fengzhu Sun
Normalizing Metagenomic Hi-C Data and Detecting Spurious Contacts Using Zero-Inflated Negative Binomial Regression. Journal of computational biology : a journal of computational molecular cell biology 29 (2) (2022)
Yuxuan Du, Fengzhu Sun
HiFine: integrating Hi-C-based and shotgun-based methods to refine binning of metagenomic contigs. Bioinformatics (Oxford, England) 38 (11) (2022)