Yuanyuan Zhang (Zemin Zhang, Zeming Zhang)

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 27

Top Venues

Nature communications

Nature cancer

Genome biology

Nature medicine

Peking University

Pennsylvania State University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Peking University Aug 20 2014

China

Professor :: Life Sciences

Genentech Inc Jan 12 1998 - Aug 19 2014

United States

Principal Scientist :: Bioinformatics

UCSF Institute of Molecular Medicine Aug 01 1995 - Jan 10 1998

United States

Postdoctoral Fellow :: Laboratory Medicine

Education History

Pennsylvania State University Aug 19 1989 - Jul 07 1995

United States

PHD :: Molecular and Cellular Biology

Publications

Xianke Xiang, Yao He, Yuanyuan Zhang, Xuerui Yang
Interrogations of single-cell RNA splicing landscapes with SCASL define new cell identities with physiological relevance. Nature communications 15 (1) (2024)
Xiaojing Chu, Xiangjie Li, Yu Zhang, Guohui Dang, Yuhui Miao, Wenbin Xu, Jinyu Wang, Yuanyuan Zhang, Sijin Cheng
Integrative single-cell analysis of human colorectal cancer reveals patient stratification with distinct immune evasion mechanisms. Nature cancer (2024)
Xianke Xiang, Yao He, Yuanyuan Zhang, Xuerui Yang
Interrogations of single-cell RNA splicing landscapes with SCASL define new cell identities with physiological relevance. Nature communications 15 (1) (2024)
Xiaojing Chu, Xiangjie Li, Yu Zhang, Guohui Dang, Yuhui Miao, Wenbin Xu, Jinyu Wang, Yuanyuan Zhang, Sijin Cheng
Integrative single-cell analysis of human colorectal cancer reveals patient stratification with distinct immune evasion mechanisms. Nature cancer (2024)
Xianke Xiang, Yao He, Yuanyuan Zhang, Xuerui Yang
Interrogations of single-cell RNA splicing landscapes with SCASL define new cell identities with physiological relevance. Nature communications 15 (1) (2024)
Zixiang Zhou, Yunshan Zhong, Yuanyuan Zhang, Xianwen Ren
Spatial transcriptomics deconvolution at single-cell resolution using Redeconve. Nature communications 14 (1) (2023)
Han Feng, Zixuan Zhao, Xiaohong Zhao, Xue Bai, Weiwei Fu, Liangtao Zheng, Boxi Chris Kang, Xiaohu Wang, Yuanyuan Zhang, Chen Dong
A novel memory-like Tfh cell subset is precursor to effector Tfh cells in recall immune responses. The Journal of experimental medicine 221 (1) (2023)
Xiaocui Zheng, Xinjing Wang, Xi Cheng, Zhaoyuan Liu, Yujia Yin, Xiaoduan Li, Zhihao Huang, Ziliang Wang, Wei Guo, Florent Ginhoux, Ziyi Li, Yuanyuan Zhang, Xipeng Wang
Single-cell analyses implicate ascites in remodeling the ecosystems of primary and metastatic tumors in ovarian cancer. Nature cancer (2023)
Qiming Zhang, Yuanyuan Zhang
Stepwise immune alterations in multiple myeloma progression. Nature cancer 1 (5) (2022)
Jingwen Ai, Jingxin Guo, Haocheng Zhang, Yi Zhang, Haochen Yang, Ke Lin, Jieyu Song, Zhangfan Fu, Mingxiang Fan, Qiran Zhang, Hongyu Wang, Yuanhan Zhao, Zhangyufan He, An Cui, Yang Zhou, Jing Wu, Mingzhe Zhou, Guanmin Yuan, Boxi Chris Kang, Ning Zhao, Yuanyuan Xu, Mengqi Zhu, Youhong Wang, Yuanyuan Zhang, Ning Jiang, Chao Qiu, Chenqi Xu, Wenhong Zhang
Cellular basis of enhanced humoral immunity to SARS-CoV-2 upon homologous or heterologous booster vaccination analyzed by single-cell immune profiling. Cell discovery 8 (1) (2022)
Ruidong Xue, Qiming Zhang, Qi Cao, Ruirui Kong, Xiao Xiang, Hengkang Liu, Mei Feng, Fangyanni Wang, Jinghui Cheng, Zhao Li, Qimin Zhan, Mi Deng, Jiye Zhu, Yuanyuan Zhang, Ning Zhang
Liver tumour immune microenvironment subtypes and neutrophil heterogeneity. Nature 612 (7938) (2022)
Baolin Liu, Yuanyuan Zhang, Dongfang Wang, Xueda Hu, Yuanyuan Zhang
Single-cell meta-analyses reveal responses of tumor-reactive CXCL13 + T cells to immune-checkpoint blockade. Nature cancer 3 (9) (2022)
Yang Liu, Shuai He, Xi-Liang Wang, Wan Peng, Qiu-Yan Chen, Dong-Mei Chi, Jie-Rong Chen, Bo-Wei Han, Guo-Wang Lin, Yi-Qi Li, Qian-Yu Wang, Rou-Jun Peng, Pan-Pan Wei, Xiang Guo, Bo Li, Xiaojun Xia, Hai-Qiang Mai, Xue-Da Hu, Yuanyuan Zhang, Yi-Xin Zeng, Jin-Xin Bei
Tumour heterogeneity and intercellular networks of nasopharyngeal carcinoma at single cell resolution. Nature communications 12 (1) (2021)
Liangtao Zheng, Shishang Qin, Wen Si, Anqiang Wang, Baocai Xing, Ranran Gao, Xianwen Ren, Li Wang, Xiaojiang Wu, Ji Zhang, Nan Wu, Ning Zhang, Hong Zheng, Hanqiang Ouyang, Keyuan Chen, Zhaode Bu, Xueda Hu, Jia Fu Ji, Yuanyuan Zhang
Pan-cancer single-cell landscape of tumor-infiltrating T cells. Science (New York, N.Y.) 374 (6574) (2021)
Chenwei Li, Baolin Liu, Boxi Chris Kang, Zedao Liu, Yedan Liu, Changya Chen, Xianwen Ren, Yuanyuan Zhang
Author Correction: SciBet as a portable and fast single cell type identifier. Nature communications 12 (1) (2021)
Baolin Liu, Xueda Hu, Kaichao Feng, Ranran Gao, Zhiqiang Xue, Sujie Zhang, Yuanyuan Zhang, Emily Corse, Yi Hu, Weidong Han, Yuanyuan Zhang
Temporal single-cell tracing reveals clonal revival and expansion of precursor exhausted T cells during anti-PD-1 therapy in lung cancer. Nature cancer 3 (1) (2021)
Dongfang Wang, Siyu Hou, Lei Zhang, Xiliang Wang, Baolin Liu, Yuanyuan Zhang
iMAP: integration of multiple single-cell datasets by adversarial paired transfer networks. Genome biology 22 (1) (2021)
Xianwen Ren, Guojie Zhong, Qiming Zhang, Lei Zhang, Yujie Sun, Yuanyuan Zhang
Reconstruction of cell spatial organization from single-cell RNA sequencing data based on ligand-receptor mediated self-assembly. Cell research 30 (9) (2020)
Baolin Liu, Chenwei Li, Ziyi Li, Dongfang Wang, Xianwen Ren, Yuanyuan Zhang
An entropy-based metric for assessing the purity of single cell populations. Nature communications 11 (1) (2020)
Chenwei Li, Baolin Liu, Boxi Chris Kang, Zedao Liu, Yedan Liu, Changya Chen, Xianwen Ren, Yuanyuan Zhang
SciBet as a portable and fast single cell type identifier. Nature communications 11 (1) (2020)
Yuanyuan Zhang, Liangtao Zheng, Lei Zhang, Xueda Hu, Xianwen Ren, Zemin Zhang
Deep single-cell RNA sequencing data of individual T cells from treatment-naïve colorectal cancer patients. Scientific data 6 (1) (2019)
Fenglin Liu, Yuanyuan Zhang, Lei Zhang, Ziyi Li, Qiao Fang, Ranran Gao, Yuanyuan Zhang
Systematic comparative analysis of single-nucleotide variant detection methods from single-cell RNA sequencing data. Genome biology 20 (1) (2019)
Heng Yang, Lin Xia, Jian Chen, Shuqing Zhang, Vincent Martin, Qingqing Li, Shangqing Lin, Jinfeng Chen, Joseph Calmette, Min Lu, Lingyi Fu, Jie Yang, Zhizhong Pan, Kuai Yu, Jingjing He, Eric F Morand, Géraldine Schlecht-Louf, Roman Krzysiek, Laurence Zitvogel, Boxi Chris Kang, Yuanyuan Zhang, Andrew Leader, Penghui Zhou, Laurence Lanfumey, Minxin Shi, Guido Kroemer, Yuting Ma
Stress-glucocorticoid-TSC22D3 axis compromises therapy-induced antitumor immunity. Nature medicine 25 (9) (2019)
Rui Yang, Sijin Cheng, Nan Luo, Ranran Gao, Kezhuo Yu, Boxi Kang, Li Wang, Qiming Zhang, Qiao Fang, Lei Zhang, Chen Li, Aibin He, Xueda Hu, Jirun Peng, Xianwen Ren, Yuanyuan Zhang
Distinct epigenetic features of tumor-reactive CD8+ T cells in colorectal cancer patients revealed by genome-wide DNA methylation analysis. Genome biology 21 (1) (2019)
Ruidan Xu, Shuyu Yu, Dan Zhu, Xinping Huang, Yuqi Xu, Yimin Lao, Yonglu Tian, Jinfang Zhang, Zefang Tang, Yuanyuan Zhang, Jing Yi, Hong Hu Zhu, Xiaofeng Zheng
hCINAP regulates the DNA-damage response and mediates the resistance of acute myelocytic leukemia cells to therapy. Nature communications 10 (1) (2019)
Xinyi Guo, Yuanyuan Zhang, Liangtao Zheng, Chunhong Zheng, Jintao Song, Qiming Zhang, Boxi Kang, Zhouzerui Liu, Liang Jin, Rui Xing, Ranran Gao, Lei Zhang, Minghui Dong, Xueda Hu, Xianwen Ren, Dennis Kirchhoff, Helge Gottfried Roider, Tiansheng Yan, Yuanyuan Zhang
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing. Nature medicine 24 (7) (2018)
Xianwen Ren, Boxi Kang, Yuanyuan Zhang
Understanding tumor ecosystems by single-cell sequencing: promises and limitations. Genome biology 19 (1) (2018)

Yuanyuan Zhang.css-eqlu8i{font-size:small;padding-left:4px;} (Zemin Zhang, Zeming Zhang)

Publication Activity (10 Years)

Top Topics

Top Venues

Yuanyuan Zhang (Zemin Zhang, Zeming Zhang)