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A human protein hydroxylase that accepts D-residues.

Hwanho ChoiAdam P HardyThomas M LeissingRasheduzzaman ChowdhuryYu NakashimaWei GeMarios MarkoulidesJohn S ScottiPhilip A GerkenHelen ThorbjornsrudDahye KangSungwoo HongJoongoo LeeMichael A McDonoughHwangseo ParkChristopher J Schofield
Published in: Communications chemistry (2020)
Factor inhibiting hypoxia-inducible factor (FIH) is a 2-oxoglutarate-dependent protein hydroxylase that catalyses C3 hydroxylations of protein residues. We report FIH can accept (D)- and (L)-residues for hydroxylation. The substrate selectivity of FIH differs for (D) and (L) epimers, e.g., (D)- but not (L)-allylglycine, and conversely (L)- but not (D)-aspartate, undergo monohydroxylation, in the tested sequence context. The (L)-Leu-containing substrate undergoes FIH-catalysed monohydroxylation, whereas (D)-Leu unexpectedly undergoes dihydroxylation. Crystallographic, mass spectrometric, and DFT studies provide insights into the selectivity of FIH towards (L)- and (D)-residues. The results of this work expand the potential range of known substrates hydroxylated by isolated FIH and imply that it will be possible to generate FIH variants with altered selectivities.
Keyphrases
  • amino acid
  • endothelial cells
  • gene expression
  • structural basis
  • signaling pathway
  • copy number
  • risk assessment
  • climate change
  • induced pluripotent stem cells
  • genome wide
  • pluripotent stem cells
  • molecular dynamics