Large-scale multitrait genome-wide association analyses identify hundreds of glaucoma risk loci.
Xikun HanPuya GharahkhaniAndrew R HamelJue-Sheng OngMiguel E RenteriaPuja A MehtaXianjun DongFrancesca PasuttoChristopher J HammondTerri L YoungPirro G HysiAndrew John LoteryEric JorgensenHelene ChoquetMichael HauserJessica N Cooke BaileyToru NakazawaMasato AkiyamaYukihiro ShigaZachary L FullerXin WangAlex W HewittJamie E CraigLouis R PasqualeDavid A MackeyJaney L WiggsAnthony P KhawajaAyellet V Segrènull nullnull nullStuart MacgregorPublished in: Nature genetics (2023)
Glaucoma, a leading cause of irreversible blindness, is a highly heritable human disease. Previous genome-wide association studies have identified over 100 loci for the most common form, primary open-angle glaucoma. Two key glaucoma-associated traits also show high heritability: intraocular pressure and optic nerve head excavation damage quantified as the vertical cup-to-disc ratio. Here, since much of glaucoma heritability remains unexplained, we conducted a large-scale multitrait genome-wide association study in participants of European ancestry combining primary open-angle glaucoma and its two associated traits (total sample size over 600,000) to substantially improve genetic discovery power (263 loci). We further increased our power by then employing a multiancestry approach, which increased the number of independent risk loci to 312, with the vast majority replicating in a large independent cohort from 23andMe, Inc. (total sample size over 2.8 million; 296 loci replicated at P < 0.05, 240 after Bonferroni correction). Leveraging multiomics datasets, we identified many potential druggable genes, including neuro-protection targets likely to act via the optic nerve, a key advance for glaucoma because all existing drugs only target intraocular pressure. We further used Mendelian randomization and genetic correlation-based approaches to identify novel links to other complex traits, including immune-related diseases such as multiple sclerosis and systemic lupus erythematosus.
Keyphrases
- optic nerve
- genome wide association
- genome wide
- genome wide association study
- optical coherence tomography
- systemic lupus erythematosus
- multiple sclerosis
- dna methylation
- copy number
- endothelial cells
- small molecule
- oxidative stress
- rheumatoid arthritis
- disease activity
- risk assessment
- white matter
- climate change
- pluripotent stem cells
- single cell