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NKX2-2 based nuclei sorting on frozen human archival pancreas enables the enrichment of islet endocrine populations for single-nucleus RNA sequencing.

Gengqiang XieMaria Pilar ToledoXue HuHyo Jeong YongPamela Sandoval SanchezChengyang LiuAli NajiJerome IriantoYue J Wang
Published in: BMC genomics (2024)
Our work fills a technological gap and helps to unleash frozen archival pancreatic tissues for molecular profiling targeting the endocrine population. This study opens doors to retrospective mappings of endocrine cell dynamics in pancreatic tissues of complex histopathology. We expect that our protocol is applicable to enrich nuclei for transcriptomics studies from various populations in different types of frozen archival tissues.
Keyphrases
  • single cell
  • gene expression
  • endothelial cells
  • randomized controlled trial
  • cell therapy
  • cross sectional
  • single molecule
  • pluripotent stem cells
  • mesenchymal stem cells