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Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex.

Thomas ChartrandRachel DalleyJennie CloseNatalia A GoriounovaBrian R LeeRusty MannJeremy A MillerGábor MolnárMukora AliceLauren AlfilerKatherine BakerTrygve E BakkenJim BergDarren BertagnolliThomas BraunKrissy BrounerTamara CasperÉva Adrienn CsajbókNick DeeTom EgdorfRachel EnstromAnna A GalakhovaAmanda GaryEmily GelfandJeff GoldyKristen HadleyTim S HeistekDiJon HillNikolas L JorstadLisa KimAgnes Katalin KocsisLauren KruseMichael KunstGabriela LeonBrian R LongMatthew MalloryMedea McGrawDelissa A McMillenErica J MeliefNorbert MihutLindsay NgJulie NyhusGáspár OláhAttila OzsvárVictoria OmsteadZoltan PeterfiChristina Alice PomLydia PotekhinaRamkumar RajanbabuMarton RozsaAugustin RuizJoanna SandleSusan M SunkinIldikó SzötsMichael TieuMartin TóthJessica TrinhSara VargasDavid VumbacoGrace WilliamsJulia WilsonZizhen YaoPál BarzóCharles CobbsRichard G EllenbogenLuke EspositoManuel FerreiraNathan W GouwensBenjamin L GrannanRyder P GwinnJason S HauptmanTim JarskyC Dirk KeeneAndrew L KoChristof KochJeffrey G OjemannAnoop PatelJacob RuzevickDaniel L SilbergeldKimberly A SmithStaci A SorensenBosiljka TasicJonathan T TingJack WatersChristiaan P J de KockHuibert D MansvelderGabor TamasHongkui ZengBrian E KalmbachEd S Lein
Published in: Science (New York, N.Y.) (2023)
Neocortical layer 1 (L1) is a site of convergence between pyramidal-neuron dendrites and feedback axons where local inhibitory signaling can profoundly shape cortical processing. Evolutionary expansion of human neocortex is marked by distinctive pyramidal neurons with extensive L1 branching, but whether L1 interneurons are similarly diverse is underexplored. Using Patch-seq recordings from human neurosurgical tissue, we identified four transcriptomic subclasses with mouse L1 homologs, along with distinct subtypes and types unmatched in mouse L1. Subclass and subtype comparisons showed stronger transcriptomic differences in human L1 and were correlated with strong morphoelectric variability along dimensions distinct from mouse L1 variability. Accompanied by greater layer thickness and other cytoarchitecture changes, these findings suggest that L1 has diverged in evolution, reflecting the demands of regulating the expanded human neocortical circuit.
Keyphrases
  • endothelial cells
  • induced pluripotent stem cells
  • pluripotent stem cells
  • single cell
  • rna seq
  • spinal cord
  • gene expression
  • genome wide
  • spinal cord injury