Jack Waters

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 34

Top Topics

Traumatic Brain Injury

Cerebral Blood Flow

Top Venues

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Cindy T J van Velthoven, Yuan Gao, Michael Kunst, Changkyu Lee, Delissa A McMillen, Anish Bhaswanth Chakka, Tamara Casper, Michael Clark, Rushil Chakrabarty, Scott Daniel, Tim Dolbeare, Rebecca Ferrer, Jessica Gloe, Jeff Goldy, Junitta B Guzman, Carliana Halterman, Windy Ho, Mike Huang, Katelyn James, Rachel McCue, Beagan Nguy, Trangthanh H Pham, Kara Ronellenfitch, Eric D Thomas, Amy Torkelson, Chelsea M Pagan, Lauren Kruse, Nick Dee, Lydia Ng, Jack Waters, Kimberly A Smith, Bosiljka Tasic, Zizhen Yao, Hongkui Zeng
The transcriptomic and spatial organization of telencephalic GABAergic neuronal types. bioRxiv : the preprint server for biology (2024)
Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Cindy T J van Velthoven, Yuan Gao, Michael Kunst, Changkyu Lee, Delissa A McMillen, Anish Bhaswanth Chakka, Tamara Casper, Michael Clark, Rushil Chakrabarty, Scott Daniel, Tim Dolbeare, Rebecca Ferrer, Jessica Gloe, Jeff Goldy, Junitta B Guzman, Carliana Halterman, Windy Ho, Mike Huang, Katelyn James, Rachel McCue, Beagan Nguy, Trangthanh H Pham, Kara Ronellenfitch, Eric D Thomas, Amy Torkelson, Chelsea M Pagan, Lauren Kruse, Nick Dee, Lydia Ng, Jack Waters, Kimberly A Smith, Bosiljka Tasic, Zizhen Yao, Hongkui Zeng
The transcriptomic and spatial organization of telencephalic GABAergic neuronal types. bioRxiv : the preprint server for biology (2024)
Yoav Ben-Simon, Marcus J Hooper, Sujatha Narayan, Tanya L Daigle, Deepanjali Dwivedi, Sharon W Way, Aaron Oster, David A Stafford, John K Mich, Michael J Taormina, Refugio A Martinez, Ximena Opitz-Araya, Jada R Roth, Shona Allen, Angela Ayala, Trygve E Bakken, Tyler Barcelli, Stuard Barta, Jacqueline Bendrick, Darren Bertagnolli, Jessica Bowlus, Gabriella Boyer, Krissy Brouner, Brittny Casian, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Rebecca K Chance, Sakshi Chavan, Maxwell Departee, Nicholas Donadio, Nadezhda I Dotson, Tom Egdorf, Mariano I Gabitto, Amanda Gary, Molly Gasperini, Jeff Goldy, Bryan B Gore, Lucas T Gray, Noah Greisman, Françoise Haeseleer, Carliana Halterman, Olivia Helback, Dirk Hockemeyer, Cindy Huang, Sydney Huff, Avery C Hunker, Nelson J Johansen, Zoe Juneau, Brian E Kalmbach, Shannon Khem, Rana Kutsal, Rachael Larsen, Changkyu Lee, Angus Y Lee, Madison Leibly, Garreck H Lenz, Elizabeth Liang, Nicholas A Lusk, Jocelin Malone, Tyler Mollenkopf, Elyse L Morin, Dakota Newman, Lydia Ng, Kiet Ngo, Victoria Omstead, Alana Oyama, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Shea Ransford, Dean Rette, Christine Rimorin, Dana Rocha, Augustin Ruiz, Raymond E A Sanchez, Adriana Sedeño Cortés, Joshua P Sevigny, Nadiya V Shapovalova, Lyudmila Shulga, Ana R Sigler, La' Akea Siverts, Saroja Somasundaram, Kaiya Stewart, Michael Tieu, Cameron Trader, Cindy T J van Velthoven, Miranda Walker, Natalie Weed, Morgan E Wirthlin, Toren Wood, Brooke Wynalda, Zizhen Yao, Thomas Zhou, Jeanelle Ariza, Nick Dee, Melissa Reding, Kara Ronellenfitch, Shoaib Mufti, Susan M Sunkin, Kimberly A Smith, Luke Esposito, Jack Waters, Bargavi Thyagarajan, Shenqin Yao, Ed S Lein, Hongkui Zeng, Boaz P Levi, John Ngai, Jonathan T Ting, Bosiljka Tasic
A suite of enhancer AAVs and transgenic mouse lines for genetic access to cortical cell types. bioRxiv : the preprint server for biology (2024)
Cindy T J van Velthoven, Yuan Gao, Michael Kunst, Changkyu Lee, Delissa A McMillen, Anish Bhaswanth Chakka, Tamara Casper, Michael Clark, Rushil Chakrabarty, Scott Daniel, Tim Dolbeare, Rebecca Ferrer, Jessica Gloe, Jeff Goldy, Junitta B Guzman, Carliana Halterman, Windy Ho, Mike Huang, Katelyn James, Beagan Nguy, Trangthanh H Pham, Kara Ronellenfitch, Eric D Thomas, Amy Torkelson, Chelsea M Pagan, Lauren Kruse, Nick Dee, Lydia Ng, Jack Waters, Kimberly A Smith, Bosiljka Tasic, Zizhen Yao, Hongkui Zeng
The transcriptomic and spatial organization of telencephalic GABAergic neuronal types. bioRxiv : the preprint server for biology (2024)
Stefan Stamenkovic, Yuandong Li, Jack Waters, Andy Y Shih
Deep Imaging to Dissect Microvascular Contributions to White Matter Degeneration in Rodent Models of Dementia. Stroke 54 (5) (2023)
Thomas Chartrand, Rachel Dalley, Jennie Close, Natalia A Goriounova, Brian R Lee, Rusty Mann, Jeremy A Miller, Gábor Molnár, Mukora Alice, Lauren Alfiler, Katherine Baker, Trygve E Bakken, Jim Berg, Darren Bertagnolli, Thomas Braun, Krissy Brouner, Tamara Casper, Éva Adrienn Csajbók, Nick Dee, Tom Egdorf, Rachel Enstrom, Anna A Galakhova, Amanda Gary, Emily Gelfand, Jeff Goldy, Kristen Hadley, Tim S Heistek, DiJon Hill, Nikolas L Jorstad, Lisa Kim, Agnes Katalin Kocsis, Lauren Kruse, Michael Kunst, Gabriela Leon, Brian R Long, Matthew Mallory, Medea McGraw, Delissa A McMillen, Erica J Melief, Norbert Mihut, Lindsay Ng, Julie Nyhus, Gáspár Oláh, Attila Ozsvár, Victoria Omstead, Zoltan Peterfi, Christina Alice Pom, Lydia Potekhina, Ramkumar Rajanbabu, Marton Rozsa, Augustin Ruiz, Joanna Sandle, Susan M Sunkin, Ildikó Szöts, Michael Tieu, Martin Tóth, Jessica Trinh, Sara Vargas, David Vumbaco, Grace Williams, Julia Wilson, Zizhen Yao, Pál Barzó, Charles Cobbs, Richard G Ellenbogen, Luke Esposito, Manuel Ferreira, Nathan W Gouwens, Benjamin L Grannan, Ryder P Gwinn, Jason S Hauptman, Tim Jarsky, C Dirk Keene, Andrew L Ko, Christof Koch, Jeffrey G Ojemann, Anoop Patel, Jacob Ruzevick, Daniel L Silbergeld, Kimberly A Smith, Staci A Sorensen, Bosiljka Tasic, Jonathan T Ting, Jack Waters, Christiaan P J de Kock, Huibert D Mansvelder, Gabor Tamas, Hongkui Zeng, Brian E Kalmbach, Ed S Lein
Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex. Science (New York, N.Y.) 382 (6667) (2023)
John K Mich, Smrithi Sunil, Nelson J Johansen, Refugio A Martinez, Mckaila Leytze, Bryan B Gore, Joseph T Mahoney, Yoav Ben-Simon, Yemeserach Bishaw, Krissy Brouner, Jazmin Campos, Ryan A Canfield, Tamara Casper, Nick Dee, Tom Egdorf, Amanda Gary, Shane Gibson, Jeff Goldy, Erin L Groce, Daniel Hirschstein, Luke V Loftus, Nicholas A Lusk, Jocelin Malone, Naomi X Martin, Deja Monet, Victoria Omstead, Ximena Opitz-Araya, Aaron Oster, Christina Alice Pom, Lydia Potekhina, Melissa Reding, Christine Rimorin, Augustin Ruiz, Adriana Sedeño Cortés, Nadiya V Shapovalova, Michael J Taormina, Naz Taskin, Michael Tieu, Nasmil Valera Cuevas, Natalie Weed, Sharon W Way, Zizhen Yao, Delissa A McMillen, Michael Kunst, Medea McGraw, Bargavi Thyagarajan, Jack Waters, Trygve E Bakken, Shenqin Yao, Kimberly A Smith, Karel Svoboda, Kaspar Podgorski, Yoshiko Kojima, Gregory D Horwitz, Hongkui Zeng, Tanya L Daigle, Ed S Lein, Bosiljka Tasic, Jonathan T Ting, Boaz P Levi
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species. bioRxiv : the preprint server for biology (2023)
Stefan Stamenkovic, Yuandong Li, Jack Waters, Andy Y Shih
Deep Imaging to Dissect Microvascular Contributions to White Matter Degeneration in Rodent Models of Dementia. Stroke 54 (5) (2023)
Mariano Gabitto, Kyle J Travaglini, Jeannelle Ariza, Eitan Kaplan, Brian R Long, Victoria Rachleff, Yi Ding, Joseph Mahoney, Nick Dee, Jeff Goldy, Erica Melief, Krissy Brouner, Jazmin Compos, John Campos, Ambrose Carr, Tamara Casper, Rushil Chakrabarty, Michael Clark, Jonah Cool, Rachel Dalley, Martin Darvas, Tim Dolbeare, Song-Lin Ding, Tom Egdorf, Luke Esposito, Rebecca Ferrer, Rohan Gala, Amanda Gary, Jessica Gloe, Nathan Guilford, Junitta Guzman, Windy Ho, Tim Jarsky, Nelson Johansen, Brian E Kalmbach, Lisa Keene, Sarah Khawand, Mitchell D Kilgore, Amanda Kirkland, Michael Kunst, Brian Lee, Christine Mac Donald, Jocelin Malone, Zoe Maltzer, Naomi Martin, Rachel McCue, Delissa A McMillen, Emma Meyerdierks, Kelly Meyers, Tyler Mollenkopf, Mark Montine, Amber Nolan, Julie Nyhus, Paul Olsen, Maiya Pacleb, Trangthanh H Pham, Christina Pom, Nadia Postupna, Augustin Ruiz, Aimee Schantz, Staci Sorensen, Brian Staats, Matt Sullivan, Susan Sunkin, Carol Thompson, Michael Tieu, Jonathan Ting, Amy Torkelson, Tracy Tran, Nasmil Valera Cuevas, Ming-Qiang Wang, Jack Waters, Angela Wilson, David Haynor, Nicole Gatto, Suman Jayadev, Shoaib Mufti, Lydia Ng, Shubhabrata Mukherjee, Paul Crane, Caitlin Latimer, Boaz P Levi, Kimberly A Smith, Jennie Close, Jeremy A Miller, Rebecca D Hodge, Eric Larson, Thomas Grabowski, Michael J Hawrylycz, C Dirk Keene, Ed S Lein
Integrated multimodal cell atlas of Alzheimer's disease. Research square (2023)
Brian R Lee, Rachel Dalley, Jeremy A Miller, Thomas Chartrand, Jennie Close, Rusty Mann, Mukora Alice, Lindsay Ng, Lauren Alfiler, Katherine Baker, Darren Bertagnolli, Krissy Brouner, Tamara Casper, Éva Adrienn Csajbók, Nicholas Donadio, Stan L W Driessens, Tom Egdorf, Rachel Enstrom, Anna A Galakhova, Amanda Gary, Emily Gelfand, Jeff Goldy, Kristen Hadley, Tim S Heistek, DiJon Hill, Wen-Hsien Hou, Nelson J Johansen, Nikolas L Jorstad, Lisa Kim, Agnes Katalin Kocsis, Lauren Kruse, Michael Kunst, Gabriela León, Brian R Long, Matthew Mallory, Michelle Maxwell, Medea McGraw, Delissa A McMillen, Erica J Melief, Gábor Molnár, Marty T Mortrud, Dakota Newman, Julie Nyhus, Ximena Opitz-Araya, Attila Ozsvár, Trangthanh H Pham, Christina Alice Pom, Lydia Potekhina, Ramkumar Rajanbabu, Augustin Ruiz, Susan M Sunkin, Ildikó Szöts, Naz Taskin, Bargavi Thyagarajan, Michael Tieu, Jessica Trinh, Sara Vargas, David Vumbaco, Femke Waleboer, Sarah Walling-Bell, Natalie Weed, Grace Williams, Julia Wilson, Shenqin Yao, Thomas Zhou, Pál Barzó, Trygve E Bakken, Charles Cobbs, Nick Dee, Richard G Ellenbogen, Luke Esposito, Manuel Ferreira, Nathan W Gouwens, Benjamin L Grannan, Ryder P Gwinn, Jason S Hauptman, Rebecca D Hodge, Tim Jarsky, C Dirk Keene, Andrew L Ko, Anders Rosendal Korshoej, Boaz P Levi, Kaare Meier, Jeffrey G Ojemann, Anoop Patel, Jacob Ruzevick, Daniel L Silbergeld, Kimberly A Smith, Jens Christian Hedemann Sørensen, Jack Waters, Hongkui Zeng, Jim Berg, Marco Capogna, Natalia A Goriounova, Brian E Kalmbach, Christiaan P J de Kock, Huibert D Mansvelder, Staci A Sorensen, Gabor Tamas, Ed S Lein, Jonathan T Ting
Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex. Science (New York, N.Y.) 382 (6667) (2023)
Staci A Sorensen, Nathan W Gouwens, Yun Wang, Matthew Mallory, Agata Budzillo, Rachel Dalley, Brian Lee, Olga Gliko, Hsien-Chi Kuo, Xiuli Kuang, Rusty Mann, Leila Ahmadinia, Lauren Alfiler, Fahimeh Baftizadeh, Katherine Baker, Sarah Bannick, Darren Bertagnolli, Kris Bickley, Phil Bohn, Dillan Brown, Jasmine Bomben, Krissy Brouner, Chao Chen, Kai Chen, Maggie Chvilicek, Forrest C Collman, Tanya L Daigle, Tim Dawes, Rebecca de Frates, Nick Dee, Maxwell DePartee, Tom Egdorf, Laila El-Hifnawi, Rachel Enstrom, Christina Kouskouti, Colin Farrell, Rohan Gala, Andrew Glomb, Clare R Gamlin, Amanda Gary, Jeff Goldy, Hong Gu, Kristen Hadley, Michael J Hawrylycz, Alex Henry, DiJon Hill, Karla E Hirokawa, Zili Huang, Katelyn Johnson, Zoe Juneau, Sara Kebede, Lisa Kim, Changkyu Lee, Phil Lesnar, Anan Li, Andrew Glomb, Yaoyao Li, Elizabeth Liang, Katie Link, Michelle Maxwell, Medea McGraw, Delissa A McMillen, Mukora Alice, Lindsay Ng, Thomas Ochoa, Aaron Oldre, Daniel Park, Christina Alice Pom, Zoran Popovich, Lydia Potekhina, Ram Rajanbabu, Shea Ransford, Melissa Reding, Augustin Ruiz, David Sandman, La' Akea Siverts, Kimberly A Smith, Michelle Stoecklin, Josef Sulc, Michael Tieu, Jonathan T Ting, Jessica Trinh, Sara Vargas, Dave Vumbaco, Miranda Walker, Micheal Wang, Adrian Andreas Wanner, Jack Waters, Grace Williams, Julia Wilson, Wei Xiong, Ed S Lein, Jim Berg, Brian E Kalmbach, Shenqin Yao, Hui Gong, Qingming Luo, Lydia Ng, Uygar Sümbül, Tim Jarsky, Zizhen Yao, Bosiljka Tasic, Hongkui Zeng
Connecting single-cell transcriptomes to projectomes in mouse visual cortex. bioRxiv : the preprint server for biology (2023)
Pooja Balaram, Kevin Takasaki, Ayana Hellevik, Jamuna Tandukar, Emily Turschak, Bryan MacLennan, Naveen Ouellette, Russel Torres, Connor Laughland, Olga Gliko, Sharmistaa Seshamani, Eric Perlman, Michael J Taormina, Erica Peterson, Zoe Juneau, Lydia Potekhina, Adam K Glaser, Jayaram Chandrashekar, Molly Logsdon, Kevin Cao, Celeste Dylla, Gaku Hatanaka, Soumya Chatterjee, Jonathan T Ting, David Vumbaco, Jack Waters, Wyeth Bair, Doris Y Tsao, Ruixuan Gao, R Clay Reid
Microscale visualization of cellular features in adult macaque visual cortex. bioRxiv : the preprint server for biology (2023)
Staci A Sorensen, Nathan W Gouwens, Yun Wang, Matthew Mallory, Agata Budzillo, Rachel Dalley, Brian Lee, Olga Gliko, Hsien-Chi Kuo, Xiuli Kuang, Rusty Mann, Leila Ahmadinia, Lauren Alfiler, Fahimeh Baftizadeh, Katherine Baker, Sarah Bannick, Darren Bertagnolli, Kris Bickley, Phil Bohn, Dillan Brown, Jasmine Bomben, Krissy Brouner, Chao Chen, Kai Chen, Maggie Chvilicek, Forrest C Collman, Tanya L Daigle, Tim Dawes, Rebecca de Frates, Nick Dee, Maxwell DePartee, Tom Egdorf, Laila El-Hifnawi, Rachel Enstrom, Christina Kouskouti, Colin Farrell, Rohan Gala, Andrew Glomb, Clare R Gamlin, Amanda Gary, Jeff Goldy, Hong Gu, Kristen Hadley, Michael J Hawrylycz, Alex Henry, DiJon Hill, Karla E Hirokawa, Zili Huang, Katelyn Johnson, Zoe Juneau, Sara Kebede, Lisa Kim, Changkyu Lee, Phil Lesnar, Anan Li, Andrew Glomb, Yaoyao Li, Elizabeth Liang, Katie Link, Michelle Maxwell, Medea McGraw, Delissa A McMillen, Mukora Alice, Lindsay Ng, Thomas Ochoa, Aaron Oldre, Daniel Park, Christina Alice Pom, Zoran Popovich, Lydia Potekhina, Ram Rajanbabu, Shea Ransford, Melissa Reding, Augustin Ruiz, David Sandman, La' Akea Siverts, Kimberly A Smith, Michelle Stoecklin, Josef Sulc, Michael Tieu, Jonathan T Ting, Jessica Trinh, Sara Vargas, Dave Vumbaco, Miranda Walker, Micheal Wang, Adrian Andreas Wanner, Jack Waters, Grace Williams, Julia Wilson, Wei Xiong, Ed S Lein, Jim Berg, Brian E Kalmbach, Shenqin Yao, Hui Gong, Qingming Luo, Lydia Ng, Uygar Sümbül, Tim Jarsky, Zizhen Yao, Bosiljka Tasic, Hongkui Zeng
Connecting single-cell transcriptomes to projectomes in mouse visual cortex. bioRxiv : the preprint server for biology (2023)
Stefan Stamenkovic, Yuandong Li, Jack Waters, Andy Y Shih
Deep Imaging to Dissect Microvascular Contributions to White Matter Degeneration in Rodent Models of Dementia. Stroke 54 (5) (2023)
Stefan Stamenkovic, Yuandong Li, Jack Waters, Andy Y Shih
Deep Imaging to Dissect Microvascular Contributions to White Matter Degeneration in Rodent Models of Dementia. Stroke 54 (5) (2023)
Staci A Sorensen, Nathan W Gouwens, Yun Wang, Matthew Mallory, Agata Budzillo, Rachel Dalley, Brian Lee, Olga Gliko, Hsien-Chi Kuo, Xiuli Kuang, Rusty Mann, Leila Ahmadinia, Lauren Alfiler, Fahimeh Baftizadeh, Katherine Baker, Sarah Bannick, Darren Bertagnolli, Kris Bickley, Phil Bohn, Dillan Brown, Jasmine Bomben, Krissy Brouner, Chao Chen, Kai Chen, Maggie Chvilicek, Forrest C Collman, Tanya L Daigle, Tim Dawes, Rebecca de Frates, Nick Dee, Maxwell DePartee, Tom Egdorf, Laila El-Hifnawi, Rachel Enstrom, Christina Kouskouti, Colin Farrell, Rohan Gala, Andrew Glomb, Clare R Gamlin, Amanda Gary, Jeff Goldy, Hong Gu, Kristen Hadley, Michael J Hawrylycz, Alex Henry, DiJon Hill, Karla E Hirokawa, Zili Huang, Katelyn Johnson, Zoe Juneau, Sara Kebede, Lisa Kim, Changkyu Lee, Phil Lesnar, Anan Li, Andrew Glomb, Yaoyao Li, Elizabeth Liang, Katie Link, Michelle Maxwell, Medea McGraw, Delissa A McMillen, Mukora Alice, Lindsay Ng, Thomas Ochoa, Aaron Oldre, Daniel Park, Christina Alice Pom, Zoran Popovich, Lydia Potekhina, Ram Rajanbabu, Shea Ransford, Melissa Reding, Augustin Ruiz, David Sandman, La' Akea Siverts, Kimberly A Smith, Michelle Stoecklin, Josef Sulc, Michael Tieu, Jonathan T Ting, Jessica Trinh, Sara Vargas, Dave Vumbaco, Miranda Walker, Micheal Wang, Adrian Andreas Wanner, Jack Waters, Grace Williams, Julia Wilson, Wei Xiong, Ed S Lein, Jim Berg, Brian E Kalmbach, Shenqin Yao, Hui Gong, Qingming Luo, Lydia Ng, Uygar Sümbül, Tim Jarsky, Zizhen Yao, Bosiljka Tasic, Hongkui Zeng
Connecting single-cell transcriptomes to projectomes in mouse visual cortex. bioRxiv : the preprint server for biology (2023)
Zizhen Yao, Cindy T J van Velthoven, Michael Kunst, Meng Zhang, Delissa A McMillen, Changkyu Lee, Won Jung, Jeff Goldy, Aliya Abdelhak, Pamela Baker, Eliza R Barkan, Darren Bertagnolli, Jazmin Campos, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Sakshi Chavan, Min Chen, Michael Clark, Jennie Close, Kirsten Crichton, Scott Daniel, Tim Dolbeare, Lauren Ellingwood, James C Gee, Alexandra Glandon, Jessica Gloe, Joshua Gould, James Gray, Nathan Guilford, Junitta B Guzman, Daniel Hirschstein, Windy Ho, Kelly Jin, Matthew Kroll, Kanan Lathia, Arielle Leon, Brian R Long, Zoe Maltzer, Naomi X Martin, Rachel McCue, Emma Meyerdierks, Thuc Nghi Nguyen, Trangthanh H Pham, Christine Rimorin, Augustin Ruiz, Nadiya Shapovalova, Clifford R Slaughterbeck, Josef Sulc, Michael Tieu, Amy Torkelson, Herman Tung, Nasmil Valera Cuevas, Katherine Wadhwani, Katelyn Kiick, Boaz P Levi, Colin Farrell, Carol L Thompson, Shoaib Mufti, Chelsea M Pagan, Lauren Kruse, Nick Dee, Susan M Sunkin, Christina Kouskouti, Michael J Hawrylycz, Jack Waters, Lydia Ng, Kimberly A Smith, Bosiljka Tasic, Xiaowei Zhuang, Hongkui Zeng
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. bioRxiv : the preprint server for biology (2023)
Stefan Stamenkovic, Yuandong Li, Jack Waters, Andy Y Shih
Deep Imaging to Dissect Microvascular Contributions to White Matter Degeneration in Rodent Models of Dementia. Stroke 54 (5) (2023)
Staci A Sorensen, Nathan W Gouwens, Yun Wang, Matthew Mallory, Agata Budzillo, Rachel Dalley, Brian Lee, Olga Gliko, Hsien-Chi Kuo, Xiuli Kuang, Rusty Mann, Leila Ahmadinia, Lauren Alfiler, Fahimeh Baftizadeh, Katherine Baker, Sarah Bannick, Darren Bertagnolli, Kris Bickley, Phil Bohn, Dillan Brown, Jasmine Bomben, Krissy Brouner, Chao Chen, Kai Chen, Maggie Chvilicek, Forrest C Collman, Tanya L Daigle, Tim Dawes, Rebecca de Frates, Nick Dee, Maxwell DePartee, Tom Egdorf, Laila El-Hifnawi, Rachel Enstrom, Christina Kouskouti, Colin Farrell, Rohan Gala, Andrew Glomb, Clare R Gamlin, Amanda Gary, Jeff Goldy, Hong Gu, Kristen Hadley, Michael J Hawrylycz, Alex Henry, DiJon Hill, Karla E Hirokawa, Zili Huang, Katelyn Johnson, Zoe Juneau, Sara Kebede, Lisa Kim, Changkyu Lee, Phil Lesnar, Anan Li, Andrew Glomb, Yaoyao Li, Elizabeth Liang, Katie Link, Michelle Maxwell, Medea McGraw, Delissa A McMillen, Mukora Alice, Lindsay Ng, Thomas Ochoa, Aaron Oldre, Daniel Park, Christina Alice Pom, Zoran Popovich, Lydia Potekhina, Ram Rajanbabu, Shea Ransford, Melissa Reding, Augustin Ruiz, David Sandman, La' Akea Siverts, Kimberly A Smith, Michelle Stoecklin, Josef Sulc, Michael Tieu, Jonathan T Ting, Jessica Trinh, Sara Vargas, Dave Vumbaco, Miranda Walker, Micheal Wang, Adrian Andreas Wanner, Jack Waters, Grace Williams, Julia Wilson, Wei Xiong, Ed S Lein, Jim Berg, Brian E Kalmbach, Shenqin Yao, Hui Gong, Qingming Luo, Lydia Ng, Uygar Sümbül, Tim Jarsky, Zizhen Yao, Bosiljka Tasic, Hongkui Zeng
Connecting single-cell transcriptomes to projectomes in mouse visual cortex. bioRxiv : the preprint server for biology (2023)
Stefan Stamenkovic, Yuandong Li, Jack Waters, Andy Y Shih
Deep Imaging to Dissect Microvascular Contributions to White Matter Degeneration in Rodent Models of Dementia. Stroke 54 (5) (2023)
Zizhen Yao, Cindy T J van Velthoven, Michael Kunst, Meng Zhang, Delissa A McMillen, Changkyu Lee, Won Jung, Jeff Goldy, Aliya Abdelhak, Matthew Aitken, Katherine Baker, Pamela Baker, Eliza Barkan, Darren Bertagnolli, Ashwin Bhandiwad, Cameron Bielstein, Prajal Bishwakarma, Jazmin Campos, Daniel Carey, Tamara Casper, Anish Bhaswanth Chakka, Rushil Chakrabarty, Sakshi Chavan, Min Chen, Michael Clark, Jennie Close, Kirsten Crichton, Scott Daniel, Peter DiValentin, Tim Dolbeare, Lauren Ellingwood, Elysha Fiabane, Timothy Fliss, James Gee, James Gerstenberger, Alexandra Glandon, Jessica Gloe, Joshua Gould, James Gray, Nathan Guilford, Junitta Guzman, Daniel Hirschstein, Windy Ho, Marcus Hooper, Mike Huang, Madison T Hupp, Kelly Jin, Matthew Kroll, Kanan Lathia, Arielle Leon, Su Li, Brian R Long, Zach Madigan, Jessica Malloy, Jocelin Malone, Zoe Maltzer, Naomi Martin, Rachel McCue, Ryan McGinty, Nicholas Mei, Jose Melchor, Emma Meyerdierks, Tyler Mollenkopf, Skyler Moonsman, Thuc Nghi Nguyen, Sven Otto, Trangthanh H Pham, Christine Rimorin, Augustin Ruiz, Raymond E A Sanchez, Lane Sawyer, Nadiya Shapovalova, Noah Shepard, Cliff Slaughterbeck, Josef Sulc, Michael Tieu, Amy Torkelson, Herman Tung, Nasmil Valera Cuevas, Shane Vance, Katherine Wadhwani, Katelyn Ward, Boaz P Levi, Colin Farrell, Rob Young, Brian Staats, Ming-Qiang Michael Wang, Carol L Thompson, Shoaib Mufti, Chelsea M Pagan, Lauren Kruse, Nick Dee, Susan M Sunkin, Luke Esposito, Michael J Hawrylycz, Jack Waters, Lydia Ng, Kimberly A Smith, Bosiljka Tasic, Xiaowei Zhuang, Hongkui Zeng
A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. Nature 624 (7991) (2023)
Staci A Sorensen, Nathan W Gouwens, Yun Wang, Matthew Mallory, Agata Budzillo, Rachel Dalley, Brian Lee, Olga Gliko, Hsien-Chi Kuo, Xiuli Kuang, Rusty Mann, Leila Ahmadinia, Lauren Alfiler, Fahimeh Baftizadeh, Katherine Baker, Sarah Bannick, Darren Bertagnolli, Kris Bickley, Phil Bohn, Dillan Brown, Jasmine Bomben, Krissy Brouner, Chao Chen, Kai Chen, Maggie Chvilicek, Forrest C Collman, Tanya L Daigle, Tim Dawes, Rebecca de Frates, Nick Dee, Maxwell DePartee, Tom Egdorf, Laila El-Hifnawi, Rachel Enstrom, Christina Kouskouti, Colin Farrell, Rohan Gala, Andrew Glomb, Clare R Gamlin, Amanda Gary, Jeff Goldy, Hong Gu, Kristen Hadley, Michael J Hawrylycz, Alex Henry, DiJon Hill, Karla E Hirokawa, Zili Huang, Katelyn Johnson, Zoe Juneau, Sara Kebede, Lisa Kim, Changkyu Lee, Phil Lesnar, Anan Li, Andrew Glomb, Yaoyao Li, Elizabeth Liang, Katie Link, Michelle Maxwell, Medea McGraw, Delissa A McMillen, Mukora Alice, Lindsay Ng, Thomas Ochoa, Aaron Oldre, Daniel Park, Christina Alice Pom, Zoran Popovich, Lydia Potekhina, Ram Rajanbabu, Shea Ransford, Melissa Reding, Augustin Ruiz, David Sandman, La' Akea Siverts, Kimberly A Smith, Michelle Stoecklin, Josef Sulc, Michael Tieu, Jonathan T Ting, Jessica Trinh, Sara Vargas, Dave Vumbaco, Miranda Walker, Micheal Wang, Adrian Andreas Wanner, Jack Waters, Grace Williams, Julia Wilson, Wei Xiong, Ed S Lein, Jim Berg, Brian E Kalmbach, Shenqin Yao, Hui Gong, Qingming Luo, Lydia Ng, Uygar Sümbül, Tim Jarsky, Zizhen Yao, Bosiljka Tasic, Hongkui Zeng
Connecting single-cell transcriptomes to projectomes in mouse visual cortex. bioRxiv : the preprint server for biology (2023)
Natalia Mesa, Jack Waters, Saskia E J de Vries
The Effect of Inclusion Criteria on the Functional Properties Reported in Mouse Visual Cortex. eNeuro 8 (1) (2021)
Lawrence Huang, Peter Ledochowitsch, Ulf Knoblich, Jérôme Lecoq, Gabe J Murphy, R Clay Reid, Saskia E J de Vries, Christof Koch, Hongkui Zeng, Michael A Buice, Jack Waters, Lu Li
Relationship between simultaneously recorded spiking activity and fluorescence signal in GCaMP6 transgenic mice. eLife 10 (2021)
Kevin Takasaki, Reza Abbasi-Asl, Jack Waters
Superficial Bound of the Depth Limit of Two-Photon Imaging in Mouse Brain. eNeuro 7 (1) (2020)
Jack Waters
Sources of widefield fluorescence from the brain. eLife 9 (2020)
Natalie Weed, Trygve E Bakken, Nile Graddis, Nathan W Gouwens, Daniel Millman, Michael Hawrylycz, Jack Waters
Identification of genetic markers for cortical areas using a Random Forest classification routine and the Allen Mouse Brain Atlas. PloS one 14 (9) (2019)
Saskia E J de Vries, Jérôme A Lecoq, Michael A Buice, Peter A Groblewski, Gabriel K Ocker, Michael Oliver, David Feng, Nicholas Cain, Peter Ledochowitsch, Daniel Millman, Kate Roll, Marina Garrett, Tom Keenan, Leonard Kuan, Samuel D Gale, Shawn R Olsen, Carol Thompson, Wayne Wakeman, Jack Waters, Derric Williams, Chris Barber, Nathan Berbesque, Brandon Blanchard, Nicholas Bowles, Shiella D Caldejon, Linzy Casal, Andrew Cho, Sissy Cross, Chinh Dang, Tim Dolbeare, Melise Edwards, John Galbraith, Nathalie Gaudreault, Terri L Gilbert, Fiona Griffin, Perry Hargrave, Robert Howard, Lawrence Huang, Sean Jewell, Nika Keller, Ulf Knoblich, Josh D Larkin, Rachael Larsen, Chris Lau, Eric Kenji Lee, Felix Lee, Arielle Leon, Lu Li, Fuhui Long, Jennifer Luviano, Kyla Mace, Thuyanh Nguyen, Jed Perkins, Miranda Robertson, Sam Seid, Eric Shea-Brown, Jianghong Shi, Nathan Sjoquist, Cliff Slaughterbeck, David Sullivan, Ryan Valenza, Casey White, Ali Williford, Daniela M Witten, Jun Zhuang, Hongkui Zeng, Colin Farrell, Lydia Ng, Amy Bernard, John W Phillips, R Clay Reid, Christof Koch
A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex. Nature neuroscience 23 (1) (2019)
Jack Waters, Eric Lee, Nathalie Gaudreault, Fiona Griffin, Jerome Lecoq, Cliff Slaughterbeck, David Sullivan, Colin Farrell, Jed Perkins, David Reid, David Feng, Nile Graddis, Marina Garrett, Yang Li, Fuhui Long, Chris Mochizuki, Kate Roll, Jun Zhuang, Carol Thompson
Biological variation in the sizes, shapes and locations of visual cortical areas in the mouse. PloS one 14 (5) (2019)
Jun Zhuang, Lydia Ng, Derric Williams, Matthew Valley, Yang Li, Marina Garrett, Jack Waters
An extended retinotopic map of mouse cortex. eLife 6 (2017)
Nicholas A Steinmetz, Christina Buetfering, Jérôme A Lecoq, Christian R Lee, Andrew J Peters, Elina A K Jacobs, Philip Coen, Douglas R Ollerenshaw, Matthew T Valley, Saskia E J de Vries, Marina Garrett, Jun Zhuang, Peter A Groblewski, Sahar Manavi, Jesse Miles, Casey White, Eric Kenji Lee, Fiona Griffin, Joshua D Larkin, Kate Roll, Sissy Cross, Thuyanh V Nguyen, Rachael Larsen, Julie Pendergraft, Tanya Daigle, Bosiljka Tasic, Carol L Thompson, Jack Waters, Shawn Olsen, David J Margolis, Hongkui Zeng, Michael Hausser, Tatsuo K Sato, Kenneth D Harris
Aberrant Cortical Activity in Multiple GCaMP6-Expressing Transgenic Mouse Lines. eNeuro 4 (5) (2017)