Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi.

Riccardo Baroncelli José F Cobo-Díaz Tiziano Benocci Mao PengEvy BattagliaSajeet Haridas William Andreopoulos Kurt M LaButti Jasmyn Pangilinan Anna LipzenMaxim KoriabineDiane Bauer Gaétan Le Floch Miia R Mäkelä Elodie Drula Bernard Henrissat Igor V Grigoriev Jo Anne Crouch Ronald P de Vries Serenella A Sukno Michael R Thon

Published in: GigaScience (2024)

These results indicate that the ancestral Colletotrichum were associated with dicot plants and certain branches progressively adapted to different monocot hosts, reshaping the gene content and its regulation.

Keyphrases

genome wide
copy number
dna methylation
gene expression
single cell
rna seq
genome wide identification