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Target Class Profiling of Small-Molecule Methyltransferases.

Quinlin M HansonNate HoxieMin ShenHui GuoIg-Jun ChoIpsita ChakrabortyBrooklyn M AragonGanesha RaiSamarjit PatnaikJohn S JaniszewskiMatthew D Hall
Published in: ACS chemical biology (2023)
Target class profiling (TCP) is a chemical biology approach to investigate understudied biological target classes. TCP is achieved by developing a generalizable assay platform and screening curated compound libraries to interrogate the chemical biological space of members of an enzyme family. In this work, we took a TCP approach to investigate inhibitory activity across a set of small-molecule methyltransferases (SMMTases), a subclass of methyltransferase enzymes, with the goal of creating a launchpad to explore this largely understudied target class. Using the representative enzymes nicotinamide N -methyltransferase (NNMT), phenylethanolamine N -methyltransferase (PNMT), histamine N -methyltransferase (HNMT), glycine N -methyltransferase (GNMT), catechol O -methyltransferase (COMT), and guanidinoacetate N -methyltransferase (GAMT), we optimized high-throughput screening (HTS)-amenable assays to screen 27,574 unique small molecules against all targets. From this data set, we identified a novel inhibitor which selectively inhibits the SMMTase HNMT and demonstrated how this platform approach can be leveraged for a targeted drug discovery campaign using the example of HNMT.
Keyphrases
  • small molecule
  • high throughput
  • drug discovery
  • single cell
  • electronic health record
  • cancer therapy
  • cross sectional
  • deep learning