Interactive visualization of nanopore sequencing signal data with Squigualiser.

Hiruna Samarakoon Kisaru Liyanage James M Ferguson Sri Parameswaran Hasindu Gamaarachchi Ira W Deveson

Published in: Bioinformatics (Oxford, England) (2024)

Squigualiser is an open-source package under an MIT licence: https://github.com/hiruna72/squigualiser. The software was developed using Python 3.8 and can be installed with pip or bioconda or executed directly using prebuilt binaries provided with each release.

Keyphrases

data analysis
electronic health record
single molecule
single cell
big data
solid state
machine learning
deep learning
electron microscopy