James M Ferguson (James Ferguson)

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 17

Top Venues

Genome research

GigaScience

Nature communications

Bioinformatics (Oxford, England)

Garvan Institute of Medical Research

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Garvan Institute of Medical Research Jun 05 2017

Australia

Genomic Systems Analyst :: Genomic Technologies

Publications

Bonson Wong, James M Ferguson, Jessica Y Do, Hasindu Gamaarachchi, Ira W Deveson
Streamlining remote nanopore data access with slow5curl. GigaScience 13 (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research (2024)
Hiruna Samarakoon, Kisaru Liyanage, James M Ferguson, Sri Parameswaran, Hasindu Gamaarachchi, Ira W Deveson
Interactive visualization of nanopore sequencing signal data with Squigualiser. Bioinformatics (Oxford, England) 40 (8) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Sri Parameswaran, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Bonson Wong, James M Ferguson, Jessica Y Do, Hasindu Gamaarachchi, Ira W Deveson
Streamlining remote nanopore data access with slow5curl. GigaScience 13 (2024)
Bonson Wong, James M Ferguson, Jessica Y Do, Hasindu Gamaarachchi, Ira W Deveson
Streamlining remote nanopore data access with slow5curl. GigaScience 13 (2024)
Hiruna Samarakoon, Kisaru Liyanage, James M Ferguson, Sri Parameswaran, Hasindu Gamaarachchi, Ira W Deveson
Interactive visualization of nanopore sequencing signal data with Squigualiser. Bioinformatics (Oxford, England) 40 (8) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Raymond Hall Yip Louie, Curtis Cai, Jerome Samir, Mandeep Singh, Ira W Deveson, James M Ferguson, Timothy G Amos, Helen Marie McGuire, Kavitha Gowrishankar, Thiruni Adikari, Robert Balderas, Martina Bonomi, Marco Ruella, David C Bishop, David Gottlieb, Emily Blyth, Kenneth Micklethwaite, Fabio Luciani
CAR + and CAR - T cells share a differentiation trajectory into an NK-like subset after CD19 CAR T cell infusion in patients with B cell malignancies. Nature communications 14 (1) (2023)
Hasindu Gamaarachchi, Hiruna Samarakoon, Sasha P Jenner, James M Ferguson, Timothy G Amos, Jillian M Hammond, Hassaan Saadat, Martin A Smith, Sri Parameswaran, Ira W Deveson
Fast nanopore sequencing data analysis with SLOW5. Nature biotechnology 40 (7) (2022)
Igor Stevanovski, Sanjog R Chintalaphani, Hasindu Gamaarachchi, James M Ferguson, Sandy S Pineda, Carolin K Scriba, Michel C Tchan, Victor S C Fung, Karl Ng, Andrea Cortese, Henry Houlden, Carol Dobson-Stone, Lauren Fitzpatrick, Glenda M Halliday, Gianina Ravenscroft, Mark R Davis, Nigel G Laing, Avi Fellner, Marina L Kennerson, Kishore Raj Kumar, Ira W Deveson
Comprehensive genetic diagnosis of tandem repeat expansion disorders with programmable targeted nanopore sequencing. Science advances 8 (9) (2022)
Rowena A Bull, Thiruni N Adikari, James M Ferguson, Jillian M Hammond, Igor Stevanovski, Alicia G Beukers, Zin Naing, Malinna Yeang, Andrey Verich, Hasindu Gamaarachchi, Ki Wook Kim, Fabio Luciani, Sacha Stelzer-Braid, John-Sebastian Eden, William D Rawlinson, Sebastiaan J Van Hal, Ira W Deveson
Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis. Nature communications 11 (1) (2020)
Hiruna Samarakoon, Sanoj Punchihewa, Anjana Senanayake, Jillian M Hammond, Igor Stevanovski, James M Ferguson, Roshan Ragel, Hasindu Gamaarachchi, Ira W Deveson
Genopo: a nanopore sequencing analysis toolkit for portable Android devices. Communications biology 3 (1) (2020)
Mandeep Singh, Ghamdan Al-Eryani, Shaun Carswell, James M Ferguson, James Blackburn, Kirston Barton, Daniel Roden, Fabio Luciani, Tri Giang Phan, Simon R Junankar, Katherine J L Jackson, Christopher C Goodnow, Martin A Smith, Alexander Swarbrick
High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes. Nature communications 10 (1) (2019)

James M Ferguson.css-eqlu8i{font-size:small;padding-left:4px;} (James Ferguson)

Publication Activity (10 Years)

Top Topics

Top Venues

James M Ferguson (James Ferguson)