Ira W Deveson (Ira Deveson)

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 65

Top Venues

Nature communications

Genome research

Science advances

Nature genetics

Garvan Institute of Medical Research

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Garvan Institute of Medical Research Sep 01 2017

Australia

Research Officer :: Genomics and Epigenetics

Publications

Shadi El-Wahsh, Avi Fellner, Matthew Hobbs, Joe Copty, Ira W Deveson, Igor Stevanovski, Marion Stoll, Danqing Zhu, Ramesh K Narayanan, Bianca Rose Grosz, Lisa Worgan, Pak Leng Cheong, Dennis Yeow, Laura Ivete Rudaks, Md Mehedi Hasan, Vanessa M Hayes, Marina L Kennerson, Kishore Raj Kumar, Michael Hayes
An Inversion Affecting the GCH1 Gene as a Novel Finding in Dopa-Responsive Dystonia. Movement disorders clinical practice (2024)
Bianca Rose Grosz, Jevin M Parmar, Melina Ellis, Samantha J Bryen, Cas Simons, Andre L M Reis, Igor Stevanovski, Ira W Deveson, Garth A Nicholson, Nigel G Laing, Mathew J Wallis, Gianina Ravenscroft, Kishore Raj Kumar, Steve Vucic, Marina L Kennerson
A deep intronic variant in MME causes autosomal recessive Charcot-Marie-Tooth neuropathy through aberrant splicing. Journal of the peripheral nervous system : JPNS (2024)
Allegra Angeloni, Skye D Fissette, Deniz U Kaya, Jillian M Hammond, Hasindu Gamaarachchi, Ira W Deveson, Robert J Klose, Weiming Li, Xiaotian Zhang, Ozren Bogdanovic
Extensive DNA methylome rearrangement during early lamprey embryogenesis. Nature communications 15 (1) (2024)
Bonson Wong, James M Ferguson, Jessica Y Do, Hasindu Gamaarachchi, Ira W Deveson
Streamlining remote nanopore data access with slow5curl. GigaScience 13 (2024)
Hope A Tanudisastro, Ira W Deveson, Harriet Dashnow, Daniel G MacArthur
Sequencing and characterizing short tandem repeats in the human genome. Nature reviews. Genetics (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics 56 (7) (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics (2024)
Brooke A Pereira, Shona Ritchie, Cecilia R Chambers, Katie A Gordon, Astrid Magenau, Kendelle J Murphy, Max Nobis, Victoria M Tyma, Ying Fei Liew, Morghan C Lucas, Marjan Mojtabavi Naeini, Deborah S Barkauskas, Diego Chacon-Fajardo, Anna E Howell, Amelia L Parker, Sean C Warren, Daniel A Reed, Victoria Lee, Xanthe L Metcalf, Young-Kyung Lee, Luke P O'Regan, Jessie Zhu, Michael Trpceski, Angela R M Kurz, Janett Stoehr, Romain Rouet, Xufeng Lin, Jessica L Chitty, Sean Porazinski, Sunny Z Wu, Elysse C Filipe, Antonia L Cadell, Holly Holliday, Jessica Yang, Michael Papanicolaou, Ruth J Lyons, Anaiis Zaratzian, Michael Tayao, Andrew Da Silva, Claire Vennin, Julia X Yin, Alysha B Dew, Paul J McMillan, Leonard D Goldstein, Ira W Deveson, David R Croucher, Michael Susithiran Samuel, Hao-Wen Sim, Marcel Batten, Lorraine A Chantrill, Sean M Grimmond, Anthony J Gill, Jaswinder Samra, Thomas R Jeffry Evans, Takako Sasaki, Tri Giang Phan, Alexander Swarbrick, Owen James Sansom, Jennifer P Morton, null null, null null, Marina Pajic, Benjamin L Parker, David Herrmann, Thomas R Cox, Paul Timpson
Temporally resolved proteomics identifies nidogen-2 as a cotarget in pancreatic cancer that modulates fibrosis and therapy response. Science advances 10 (27) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research (2024)
Brooke A Pereira, Shona Ritchie, Cecilia R Chambers, Katie A Gordon, Astrid Magenau, Kendelle J Murphy, Max Nobis, Victoria M Tyma, Ying Fei Liew, Morghan C Lucas, Marjan Mojtabavi Naeini, Deborah S Barkauskas, Diego Chacon-Fajardo, Anna E Howell, Amelia L Parker, Sean C Warren, Daniel A Reed, Victoria Lee, Xanthe L Metcalf, Young-Kyung Lee, Luke P O'Regan, Jessie Zhu, Michael Trpceski, Angela R M Kurz, Janett Stoehr, Romain Rouet, Xufeng Lin, Jessica L Chitty, Sean Porazinski, Sunny Z Wu, Elysse C Filipe, Antonia L Cadell, Holly Holliday, Jessica Yang, Michael Papanicolaou, Ruth J Lyons, Anaiis Zaratzian, Michael Tayao, Andrew Da Silva, Claire Vennin, Julia X Yin, Alysha B Dew, Paul J McMillan, Leonard D Goldstein, Ira W Deveson, David R Croucher, Michael Susithiran Samuel, Hao-Wen Sim, Marcel Batten, Lorraine A Chantrill, Sean M Grimmond, Anthony J Gill, Jaswinder Samra, Thomas R Jeffry Evans, Takako Sasaki, Tri Giang Phan, Alexander Swarbrick, Owen James Sansom, Jennifer P Morton, null null, null null, Marina Pajic, Benjamin L Parker, David Herrmann, Thomas R Cox, Paul Timpson
Temporally resolved proteomics identifies nidogen-2 as a cotarget in pancreatic cancer that modulates fibrosis and therapy response. Science advances 10 (27) (2024)
Hiruna Samarakoon, Kisaru Liyanage, James M Ferguson, Sri Parameswaran, Hasindu Gamaarachchi, Ira W Deveson
Interactive visualization of nanopore sequencing signal data with Squigualiser. Bioinformatics (Oxford, England) 40 (8) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Sri Parameswaran, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics 56 (7) (2024)
David Pellerin, Jean-Loup Méreaux, Susana Boluda, Matt C Danzi, Marie-Josée Dicaire, Claire-Sophie Davoine, David Genis, Guinevere Spurdens, Catherine Ashton, Jillian M Hammond, Brandon J Gerhart, Viorica Chelban, Phuong U Le, Maryam Safisamghabadi, Christopher Yanick, Hamin Lee, Sathiji K Nageshwaran, Gabriel Matos-Rodrigues, Zane Jaunmuktane, Kevin Petrecca, Schahram Akbarian, André Nussenzweig, Karen Usdin, Mathilde Renaud, Céline Bonnet, Gianina Ravenscroft, Mario A Saporta, Jill S Napierala, Henry Houlden, Ira W Deveson, Marek Napierala, Alexis Brice, Laura Molina Porcel, Danielle Seilhean, Stephan Zuchner, Alexandra Dürr, Bernard Brais
Somatic instability of the FGF14 -SCA27B GAA•TTC repeat reveals a marked expansion bias in the cerebellum. medRxiv : the preprint server for health sciences (2024)
Shadi El-Wahsh, Avi Fellner, Matthew Hobbs, Joe Copty, Ira W Deveson, Igor Stevanovski, Marion Stoll, Danqing Zhu, Ramesh K Narayanan, Bianca Rose Grosz, Lisa Worgan, Pak Leng Cheong, Dennis Yeow, Laura Ivete Rudaks, Md Mehedi Hasan, Vanessa M Hayes, Marina L Kennerson, Kishore Raj Kumar, Michael Hayes
An Inversion Affecting the GCH1 Gene as a Novel Finding in Dopa-Responsive Dystonia. Movement disorders clinical practice 11 (5) (2024)
Bianca Rose Grosz, Jevin M Parmar, Melina Ellis, Samantha J Bryen, Cas Simons, Andre L M Reis, Igor Stevanovski, Ira W Deveson, Garth A Nicholson, Nigel G Laing, Mathew J Wallis, Gianina Ravenscroft, Kishore Raj Kumar, Steve Vucic, Marina L Kennerson
A deep intronic variant in MME causes autosomal recessive Charcot-Marie-Tooth neuropathy through aberrant splicing. Journal of the peripheral nervous system : JPNS 29 (2) (2024)
Laura Ivete Rudaks, Dennis Yeow, Karl Ng, Ira W Deveson, Marina L Kennerson, Kishore Raj Kumar
An Update on the Adult-Onset Hereditary Cerebellar Ataxias: Novel Genetic Causes and New Diagnostic Approaches. Cerebellum (London, England) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Hope A Tanudisastro, Ira W Deveson, Harriet Dashnow, Daniel G MacArthur
Sequencing and characterizing short tandem repeats in the human genome. Nature reviews. Genetics (2024)
Andreas Cortese, Sarah Jane Beecroft, Stefano Facchini, Riccardo Curro, Macarena Cabrera-Serrano, Igor Stevanovski, Sanjog R Chintalaphani, Hasindu Gamaarachchi, Ben Weisburd, Chiara Folland, Gavin Monahan, Carolin K Scriba, Lein Dofash, Mridul Johari, Bianca Rose Grosz, Melina Ellis, Liam G Fearnley, Rick M Tankard, Justin Read, Ashirwad Merve, Natalia Dominik, Elisa Vegezzi, Ricardo P Schnekenberg, Gorka Fernandez-Eulate, Marion Masingue, Diane Giovannini, Martin B Delatycki, Elsdon Storey, Mac Gardner, David J Amor, Garth A Nicholson, Steve Vucic, Robert D Henderson, Thomas Robertson, Jason M Dyke, Vicki Fabian, Frank Mastaglia, Mark R Davis, Marina Kennerson, null null, Ros Quinlivan, Simon Hammans, Arianna Tucci, Melanie Bahlo, Catriona A Mclean, Nigel G Laing, Tanya Stojkovic, Henry Houlden, Michael G Hanna, Ira W Deveson, Paul J Lockhart, Phillipa J Lamont, Michael Collingwood Fahey, Enrico Bugiardini, Gianina Ravenscroft
A CCG expansion in ABCD3 causes oculopharyngodistal myopathy in individuals of European ancestry. Nature communications 15 (1) (2024)
Shadi El-Wahsh, Avi Fellner, Matthew Hobbs, Joe Copty, Ira W Deveson, Igor Stevanovski, Marion Stoll, Danqing Zhu, Ramesh K Narayanan, Bianca Rose Grosz, Lisa Worgan, Pak Leng Cheong, Dennis Yeow, Laura Ivete Rudaks, Md Mehedi Hasan, Vanessa M Hayes, Marina L Kennerson, Kishore Raj Kumar, Michael Hayes
An Inversion Affecting the GCH1 Gene as a Novel Finding in Dopa-Responsive Dystonia. Movement disorders clinical practice 11 (5) (2024)
Hope A Tanudisastro, Ira W Deveson, Harriet Dashnow, Daniel G MacArthur
Sequencing and characterizing short tandem repeats in the human genome. Nature reviews. Genetics 25 (7) (2024)
Hope A Tanudisastro, Ira W Deveson, Harriet Dashnow, Daniel G MacArthur
Sequencing and characterizing short tandem repeats in the human genome. Nature reviews. Genetics 25 (7) (2024)
Bonson Wong, James M Ferguson, Jessica Y Do, Hasindu Gamaarachchi, Ira W Deveson
Streamlining remote nanopore data access with slow5curl. GigaScience 13 (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics (2024)
Bonson Wong, James M Ferguson, Jessica Y Do, Hasindu Gamaarachchi, Ira W Deveson
Streamlining remote nanopore data access with slow5curl. GigaScience 13 (2024)
Hiruna Samarakoon, Kisaru Liyanage, James M Ferguson, Sri Parameswaran, Hasindu Gamaarachchi, Ira W Deveson
Interactive visualization of nanopore sequencing signal data with Squigualiser. Bioinformatics (Oxford, England) 40 (8) (2024)
David Pellerin, Giulia F Del Gobbo, Madeline Couse, Egor Dolzhenko, Sathiji K Nageshwaran, Warren A Cheung, Isaac R L Xu, Marie-Josée Dicaire, Guinevere Spurdens, Gabriel Matos-Rodrigues, Igor Stevanovski, Carolin K Scriba, Adriana P Rebelo, Virginie Roth, Marion Wandzel, Céline Bonnet, Catherine Ashton, Aman Agarwal, Cyril J Peter, Dan Hasson, Nadejda M Tsankova, Ken Dewar, Phillipa J Lamont, Nigel G Laing, Mathilde Renaud, Henry Houlden, Matthis Synofzik, Karen Usdin, Andre Nussenzweig, Marek Napierala, Zhao Chen, Hong Jiang, Ira W Deveson, Gianina Ravenscroft, Schahram Akbarian, Michael A Eberle, Kym M Boycott, Tomi Pastinen, null null, Bernard Brais, Stephan Zuchner, Vance P Lemmon
A common flanking variant is associated with enhanced stability of the FGF14-SCA27B repeat locus. Nature genetics 56 (7) (2024)
Bianca Rose Grosz, Jevin M Parmar, Melina Ellis, Samantha J Bryen, Cas Simons, Andre L M Reis, Igor Stevanovski, Ira W Deveson, Garth A Nicholson, Nigel G Laing, Mathew J Wallis, Gianina Ravenscroft, Kishore Raj Kumar, Steve Vucic, Marina L Kennerson
A deep intronic variant in MME causes autosomal recessive Charcot-Marie-Tooth neuropathy through aberrant splicing. Journal of the peripheral nervous system : JPNS 29 (2) (2024)
Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon, Kisaru Liyanage, Ira W Deveson
Simulation of nanopore sequencing signal data with tunable parameters. Genome research 34 (5) (2024)
Brooke A Pereira, Shona Ritchie, Cecilia R Chambers, Katie A Gordon, Astrid Magenau, Kendelle J Murphy, Max Nobis, Victoria M Tyma, Ying Fei Liew, Morghan C Lucas, Marjan Mojtabavi Naeini, Deborah S Barkauskas, Diego Chacon-Fajardo, Anna E Howell, Amelia L Parker, Sean C Warren, Daniel A Reed, Victoria Lee, Xanthe L Metcalf, Young-Kyung Lee, Luke P O'Regan, Jessie Zhu, Michael Trpceski, Angela R M Kurz, Janett Stoehr, Romain Rouet, Xufeng Lin, Jessica L Chitty, Sean Porazinski, Sunny Z Wu, Elysse C Filipe, Antonia L Cadell, Holly Holliday, Jessica Yang, Michael Papanicolaou, Ruth J Lyons, Anaiis Zaratzian, Michael Tayao, Andrew Da Silva, Claire Vennin, Julia X Yin, Alysha B Dew, Paul J McMillan, Leonard D Goldstein, Ira W Deveson, David R Croucher, Michael Susithiran Samuel, Hao-Wen Sim, Marcel Batten, Lorraine A Chantrill, Sean M Grimmond, Anthony J Gill, Jaswinder Samra, Thomas R Jeffry Evans, Takako Sasaki, Tri Giang Phan, Alexander Swarbrick, Owen James Sansom, Jennifer P Morton, null null, null null, Marina Pajic, Benjamin L Parker, David Herrmann, Thomas R Cox, Paul Timpson
Temporally resolved proteomics identifies nidogen-2 as a cotarget in pancreatic cancer that modulates fibrosis and therapy response. Science advances 10 (27) (2024)
Shadi El-Wahsh, Avi Fellner, Matthew Hobbs, Joe Copty, Ira W Deveson, Igor Stevanovski, Marion Stoll, Danqing Zhu, Ramesh K Narayanan, Bianca Rose Grosz, Lisa Worgan, Pak Leng Cheong, Dennis Yeow, Laura Ivete Rudaks, Md Mehedi Hasan, Vanessa M Hayes, Marina L Kennerson, Kishore Raj Kumar, Michael Hayes
An Inversion Affecting the GCH1 Gene as a Novel Finding in Dopa-Responsive Dystonia. Movement disorders clinical practice 11 (5) (2024)
Allegra Angeloni, Skye D Fissette, Deniz U Kaya, Jillian M Hammond, Hasindu Gamaarachchi, Ira W Deveson, Robert J Klose, Weiming Li, Xiaotian Zhang, Ozren Bogdanovic
Extensive DNA methylome rearrangement during early lamprey embryogenesis. Nature communications 15 (1) (2024)
Allegra Angeloni, Skye D Fissette, Deniz U Kaya, Jillian M Hammond, Hasindu Gamaarachchi, Ira W Deveson, Robert J Klose, Weiming Li, Xiaotian Zhang, Ozren Bogdanovic
Extensive DNA methylome rearrangement during early lamprey embryogenesis. Nature communications 15 (1) (2024)
Andreas Cortese, Sarah Jane Beecroft, Stefano Facchini, Riccardo Curro, Macarena Cabrera-Serrano, Igor Stevanovski, Sanjog R Chintalaphani, Hasindu Gamaarachchi, Ben Weisburd, Chiara Folland, Gavin Monahan, Carolin K Scriba, Lein Dofash, Mridul Johari, Bianca Rose Grosz, Melina Ellis, Liam G Fearnley, Rick M Tankard, Justin Read, Ashirwad Merve, Natalia Dominik, Elisa Vegezzi, Ricardo P Schnekenberg, Gorka Fernandez-Eulate, Marion Masingue, Diane Giovannini, Martin B Delatycki, Elsdon Storey, Mac Gardner, David J Amor, Garth A Nicholson, Steve Vucic, Robert D Henderson, Thomas Robertson, Jason M Dyke, Vicki Fabian, Frank Mastaglia, Mark R Davis, Marina Kennerson, null null, Ros Quinlivan, Simon Hammans, Arianna Tucci, Melanie Bahlo, Catriona A Mclean, Nigel G Laing, Tanya Stojkovic, Henry Houlden, Michael G Hanna, Ira W Deveson, Paul J Lockhart, Phillipa J Lamont, Michael Collingwood Fahey, Enrico Bugiardini, Gianina Ravenscroft
A CCG expansion in ABCD3 causes oculopharyngodistal myopathy in individuals of European ancestry. Nature communications 15 (1) (2024)
Bianca Rose Grosz, Jevin M Parmar, Melina Ellis, Samantha J Bryen, Cas Simons, Andre L M Reis, Igor Stevanovski, Ira W Deveson, Garth A Nicholson, Nigel G Laing, Mathew J Wallis, Gianina Ravenscroft, Kishore Raj Kumar, Steve Vucic, Marina L Kennerson
A deep intronic variant in MME causes autosomal recessive Charcot-Marie-Tooth neuropathy through aberrant splicing. Journal of the peripheral nervous system : JPNS 29 (2) (2024)
Hiruna Samarakoon, James M Ferguson, Sasha P Jenner, Timothy G Amos, Sri Parameswaran, Hasindu Gamaarachchi, Ira W Deveson
Flexible and efficient handling of nanopore sequencing signal data with slow5tools. Genome biology 24 (1) (2023)
Raymond Hall Yip Louie, Curtis Cai, Jerome Samir, Mandeep Singh, Ira W Deveson, James M Ferguson, Timothy G Amos, Helen Marie McGuire, Kavitha Gowrishankar, Thiruni Adikari, Robert Balderas, Martina Bonomi, Marco Ruella, David C Bishop, David Gottlieb, Emily Blyth, Kenneth Micklethwaite, Fabio Luciani
CAR + and CAR - T cells share a differentiation trajectory into an NK-like subset after CD19 CAR T cell infusion in patients with B cell malignancies. Nature communications 14 (1) (2023)
Chiara Folland, Vijay Ganesh, Ben Weisburd, Catriona A Mclean, Andrew J Kornberg, Anne H O'Donnell-Luria, Heidi L Rehm, Igor Stevanovski, Sanjog R Chintalaphani, Paul Kennedy, Ira W Deveson, Gianina Ravenscroft
Transcriptome and Genome Analysis Uncovers a DMD Structural Variant: A Case Report. Neurology. Genetics 9 (2) (2023)
Carolin K Scriba, Igor Stevanovski, Sanjog R Chintalaphani, Hasindu Gamaarachchi, Roula Ghaoui, Darshan Ghia, Robert D Henderson, Nerissa Jordan, Antony Winkel, Phillipa J Lamont, Miriam J Rodrigues, Richard H Roxburgh, Ben Weisburd, Nigel G Laing, Ira W Deveson, Mark R Davis, Gianina Ravenscroft
RFC1 in an Australasian neurological disease cohort: extending the genetic heterogeneity and implications for diagnostics. Brain communications 5 (4) (2023)
Natalia Dominik, Stefania Magri, Riccardo Currò, Elena Abati, Stefano Facchini, Marinella Corbetta, Hannah MacPherson, Daniela Di Bella, Elisa Sarto, Igor Stevanovski, Sanjog R Chintalaphani, Fulya Akcimen, Arianna Manini, Elisa Vegezzi, Ilaria Quartesan, Kylie-Ann Montgomery, Valentina Pirota, Emmanuele Crespan, Cecilia Perini, Glenda Paola Grupelli, Pedro José Tomaselli, Wilson Marques, null null, Joseph Shaw, James Polke, Ettore Salsano, Silvia Fenu, Davide Pareyson, Chiara Pisciotta, George K Tofaris, Andrea H Nemeth, John Ealing, Aleksandar Radunovic, Seamus Kearney, Kishore R Kumar, Steve Vucic, Marina Kennerson, Mary M Reilly, Henry Houlden, Ira W Deveson, Arianna Tucci, Franco Taroni, Andreas Cortese
Normal and pathogenic variation of RFC1 repeat expansions: implications for clinical diagnosis. Brain : a journal of neurology (2023)
Chiara Folland, Vijay Ganesh, Ben Weisburd, Catriona A Mclean, Andrew J Kornberg, Anne H O'Donnell-Luria, Heidi L Rehm, Igor Stevanovski, Sanjog R Chintalaphani, Paul Kennedy, Ira W Deveson, Gianina Ravenscroft
Transcriptome and Genome Analysis Uncovers a DMD Structural Variant: A Case Report. Neurology. Genetics 9 (2) (2023)
Chiara Folland, Vijay Ganesh, Ben Weisburd, Catriona A Mclean, Andrew J Kornberg, Anne H O'Donnell-Luria, Heidi L Rehm, Igor Stevanovski, Sanjog R Chintalaphani, Paul Kennedy, Ira W Deveson, Gianina Ravenscroft
Transcriptome and Genome Analysis Uncovers a DMD Structural Variant: A Case Report. Neurology. Genetics 9 (2) (2023)
Chiara Folland, Vijay Ganesh, Ben Weisburd, Catriona A Mclean, Andrew J Kornberg, Anne H O'Donnell-Luria, Heidi L Rehm, Igor Stevanovski, Sanjog R Chintalaphani, Paul Kennedy, Ira W Deveson, Gianina Ravenscroft
Transcriptome and Genome Analysis Uncovers a DMD Structural Variant: A Case Report. Neurology. Genetics 9 (2) (2023)
Andre L M Reis, Melissa Rapadas, Jillian M Hammond, Hasindu Gamaarachchi, Igor Stevanovski, Meutia Ayuputeri Kumaheri, Sanjog R Chintalaphani, Duminda S B Dissanayake, Owen M Siggs, Alex W Hewitt, Bastien Llamas, Alex Brown, Gareth S Baynam, Graham J Mann, Brendan J McMorran, Simon Easteal, Azure Hermes, Misty R Jenkins, null null, Hardip R Patel, Ira W Deveson
The landscape of genomic structural variation in Indigenous Australians. Nature (2023)
Hasindu Gamaarachchi, Hiruna Samarakoon, Sasha P Jenner, James M Ferguson, Timothy G Amos, Jillian M Hammond, Hassaan Saadat, Martin A Smith, Sri Parameswaran, Ira W Deveson
Fast nanopore sequencing data analysis with SLOW5. Nature biotechnology 40 (7) (2022)
Sarah L Whiteley, Susan Wagner, Clare Ellen Holleley, Ira W Deveson, Jennifer A Marshall Graves, Arthur Georges
Truncated jarid2 and kdm6b transcripts are associated with temperature-induced sex reversal during development in a dragon lizard. Science advances 8 (16) (2022)
Charles S P Foster, Sacha Stelzer-Braid, Ira W Deveson, Rowena A Bull, Malinna Yeang, Jane-Phan Au, Mariana Ruiz Silva, Sebastiaan J van Hal, Rebecca J Rockett, Vitali Sintchenko, Ki Wook Kim, William D Rawlinson
Assessment of Inter-Laboratory Differences in SARS-CoV-2 Consensus Genome Assemblies between Public Health Laboratories in Australia. Viruses 14 (2) (2022)
Igor Stevanovski, Sanjog R Chintalaphani, Hasindu Gamaarachchi, James M Ferguson, Sandy S Pineda, Carolin K Scriba, Michel C Tchan, Victor S C Fung, Karl Ng, Andrea Cortese, Henry Houlden, Carol Dobson-Stone, Lauren Fitzpatrick, Glenda M Halliday, Gianina Ravenscroft, Mark R Davis, Nigel G Laing, Avi Fellner, Marina L Kennerson, Kishore Raj Kumar, Ira W Deveson
Comprehensive genetic diagnosis of tandem repeat expansion disorders with programmable targeted nanopore sequencing. Science advances 8 (9) (2022)
Helen M Gunter, Scott E Youlten, Bindu Swapna Madala, Andre L M Reis, Igor Stevanovski, Ted Wong, Sarah K Kummerfield, Ira W Deveson, Nadia S Santini, Esteban Marcellin, Tim R Mercer
Library adaptors with integrated reference controls improve the accuracy and reliability of nanopore sequencing. Nature communications 13 (1) (2022)
Nenad Bartonicek, Romain Rouet, Joanna Warren, Claudia Loetsch, Gabriela Santos Rodriguez, Stacey Walters, Francis Lin, David Zahra, James Blackburn, Jillian M Hammond, Andre L M Reis, Ira W Deveson, Nathan W Zammit, Mahdi Zeraati, Shane Grey, Daniel Christ, John S Mattick, Tatyana Chtanova, Robert Brink, Marcel E Dinger, Robert J Weatheritt, Jonathan Sprent, Cecile King
The retroelement Lx9 puts a brake on the immune response to virus infection. Nature 608 (7924) (2022)
Áine Niamh O'Toole, Verity Hill, Oliver G Pybus, Alexander Watts, Issac I Bogoch, Kamran Khan, Jane P Messina, null null, null null, null null, Houriiyah Tegally, Richard J Lessells, Jennifer Giandhari, Sureshnee Pillay, Kefentse Arnold Tumedi, Gape Nyepetsi, Malebogo Kebabonye, Maitshwarelo I Matsheka, Madisa Mine, Sima Tokajian, Hamad Hassan, Tamara Salloum, Georgi Merhi, Jad Koweyes, Jemma L Geoghegan, Joep de Ligt, Xiaoyun Ren, Matthew Storey, Nikki E Freed, Chitra Pattabiraman, Pramada Prasad, Anita S Desai, Ravi Vasanthapuram, Thomas F Schulz, Lars Steinbrück, Tanja Stadler, null null, Antonio Parisi, Angelica Bianco, Darío García de Viedma, Sergio Buenestado-Serrano, Vítor Borges, Joana Isidro, Sílvia Duarte, João Paulo Gomes, Neta S Zuckerman, Michal Mandelboim, Orna Mor, Torsten Seemann, Alicia Arnott, Jenny Draper, Mailie L Gall, William Rawlinson, Ira W Deveson, Sanmarié Schlebusch, Jamie McMahon, Lex Leong, Chuan Kok Lim, Maria Chironna, Daniela Loconsole, Antonin Bal, Laurence Josset, Edward Holmes, Kirsten St George, Erica Lasek-Nesselquist, Reina S Sikkema, Bas Oude Munnink, Marion Koopmans, Mia Brytting, V Sudha Rani, S Pavani, Teemu Smura, Albert Heim, Satu Kurkela, Massab Umair, Muhammad Salman, Barbara Bartolini, Martina Rueca, Christian Drosten, Thorsten Wolff, Olin Silander, Dirk Eggink, Chantal Reusken, Harry Vennema, Aekyung Park, Christine V F Carrington, Nikita Sahadeo, Michael Carr, Gabo Gonzalez, null null, null null, null null, null null, null null, null null, null null, Tulio de Oliveira, Nuno Rodrigues Faria, Andrew Rambaut, Moritz U G Kraemer
Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch. Wellcome open research 6 (2021)
Quentin Van Thillo, Jolien De Bie, Janith A Seneviratne, Sofie Demeyer, Sofia A Omari, Anushree Balachandran, Vicki Zhai, Wai L Tam, Bram Sweron, Ellen Geerdens, Olga Gielen, Sarah Provost, Heidi Segers, Nancy Boeckx, Glenn M Marshall, Belamy B Cheung, Kiyotaka Isobe, Itaru Kato, Junko Takita, Timothy G Amos, Ira W Deveson, Hannah McCalmont, Richard B Lock, Ethan P Oxley, Maximilian M Garwood, Ross A Dickins, Anne Uyttebroeck, Daniel R Carter, Jan Cools, Charles E de Bock
Oncogenic cooperation between TCF7-SPI1 and NRAS(G12D) requires β-catenin activity to drive T-cell acute lymphoblastic leukemia. Nature communications 12 (1) (2021)
Sarah L Whiteley, Clare E Holleley, Susan Wagner, James Blackburn, Ira W Deveson, Jennifer Ann Marshall Graves, Arthur Georges
Two transcriptionally distinct pathways drive female development in a reptile with both genetic and temperature dependent sex determination. PLoS genetics 17 (4) (2021)
Sanjog R Chintalaphani, Sandy S Pineda, Ira W Deveson, Kishore Raj Kumar
An update on the neurological short tandem repeat expansion disorders and the emergence of long-read sequencing diagnostics. Acta neuropathologica communications 9 (1) (2021)
Ira W Deveson, Binsheng Gong, Kevin Lai, Jennifer S LoCoco, Todd A Richmond, Jeoffrey Schageman, Zhihong Zhang, Natalia Novoradovskaya, James C Willey, Wendell D Jones, Rebecca Kusko, Guangchun Chen, Bindu Swapna Madala, James Blackburn, Igor Stevanovski, Ambica Bhandari, Devin Close, Jeffrey Conroy, Michael Hubank, Narasimha Marella, Piotr A Mieczkowski, Fujun Qiu, Robert Sebra, Daniel Stetson, Lihyun Sun, Philippe Szankasi, Haowen Tan, Lin-Ya Tang, Hanane Arib, Hunter Best, Blake Burgher, Pierre R Bushel, Fergal Casey, Simon Cawley, Chia-Jung Chang, Jonathan Choi, Jorge Dinis, Daniel Duncan, Agda Karina Eterovic, Liang Feng, Abhisek Ghosal, Kristina Giorda, Sean Glenn, Scott Happe, Nathan Haseley, Kyle Horvath, Li-Yuan Hung, Mirna Jarosz, Garima Kushwaha, Dan Li, Quan-Zhen Li, Zhiguang Li, Liang-Chun Liu, Zhichao Liu, Charles Ma, Christopher E Mason, Dalila B Megherbi, Tom Morrison, Carlos Pabón-Peña, Mehdi Pirooznia, Paula Z Proszek, Amelia Raymond, Paul Rindler, Rebecca Ringler, Andreas Scherer, Rita Shaknovich, Tieliu Shi, Melissa Smith, Ping Song, Maya Strahl, Venkat J Thodima, Nikola Tom, Suman Verma, Jiashi Wang, Leihong Wu, Wenzhong Xiao, Chang Xu, Mary Yang, Guangliang Zhang, Sa Zhang, Yilin Zhang, Leming Shi, Weida Tong, Donald J Johann, Timothy R Mercer, Joshua Xu, null null
Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology. Nature biotechnology 39 (9) (2021)
Andre L M Reis, Ira W Deveson, Ted Wong, Bindu Swapna Madala, Chris Barker, James Blackburn, Esteban Marcellin, Timothy R Mercer
A universal and independent synthetic DNA ladder for the quantitative measurement of genomic features. Nature communications 11 (1) (2020)
Erin E Heyer, Ira W Deveson, Danson Wooi, Christina I Selinger, Ruth J Lyons, Vanessa M Hayes, Sandra A O'Toole, Mandy L Ballinger, Devinder Gill, David M Thomas, Tim R Mercer, James Blackburn
Author Correction: Diagnosis of fusion genes using targeted RNA sequencing. Nature communications 11 (1) (2020)
Rowena A Bull, Thiruni N Adikari, James M Ferguson, Jillian M Hammond, Igor Stevanovski, Alicia G Beukers, Zin Naing, Malinna Yeang, Andrey Verich, Hasindu Gamaarachchi, Ki Wook Kim, Fabio Luciani, Sacha Stelzer-Braid, John-Sebastian Eden, William D Rawlinson, Sebastiaan J Van Hal, Ira W Deveson
Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis. Nature communications 11 (1) (2020)
Hiruna Samarakoon, Sanoj Punchihewa, Anjana Senanayake, Jillian M Hammond, Igor Stevanovski, James M Ferguson, Roshan Ragel, Hasindu Gamaarachchi, Ira W Deveson
Genopo: a nanopore sequencing analysis toolkit for portable Android devices. Communications biology 3 (1) (2020)
Ira W Deveson, Bindu Swapna Madala, James Blackburn, Chris Barker, Ted Wong, Kirston M Barton, Martin A Smith, D Neil Watkins, Tim R Mercer
Chiral DNA sequences as commutable controls for clinical genomics. Nature communications 10 (1) (2019)
James Blackburn, Ted Wong, Bindu Swapna Madala, Chris Barker, Simon A Hardwick, Andre L M Reis, Ira W Deveson, Tim R Mercer
Use of synthetic DNA spike-in controls (sequins) for human genome sequencing. Nature protocols 14 (7) (2019)
Erin E Heyer, Ira W Deveson, Danson Wooi, Christina I Selinger, Ruth J Lyons, Vanessa M Hayes, Sandra A O'Toole, Mandy L Ballinger, Devinder Gill, David M Thomas, Tim R Mercer, James Blackburn
Diagnosis of fusion genes using targeted RNA sequencing. Nature communications 10 (1) (2019)

Ira W Deveson.css-eqlu8i{font-size:small;padding-left:4px;} (Ira Deveson)

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Ira W Deveson (Ira Deveson)